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2024-05-19 18:25:19

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Xylella fastidiosa Temecula1, Temecula1

Number of genes found: 90

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Xylella fastidiosa Temecula1, Temecula1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PD0943 phage-related proteinSubName: Full=Phage-related protein; chromosome CDS1142253 375 + 0.445333
NA PD0799 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS988291 612 - 0.555556
NA PD1556 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1804531 804 + 0.529851
NA PD0057 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS75271 798 + 0.517544
NA PD1878 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2207847 201 - 0.527363
afuA PD0267 periplasmic iron-binding proteinSubName: Full=Periplasmic iron-binding protein; chromosome CDS338999 993 + 0.577039
ahcY PD0319 adenosylhomocysteinaseRecName: Full=Adenosylhomocysteinase; EC=3.3.1.1; AltName: Full=S-adenosyl-L-homocysteine hydrolase; Short=AdoHcyase; chromosome CDS408598 1443 - 0.512128
apbE PD1557 thiamine biosynthesis lipoprotein ApbE precursorSubName: Full=Thiamine biosynthesis lipoprotein ApbE; chromosome CDS1805446 936 + 0.550214
bioA PD0155 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferaseSubName: Full=Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; chromosome CDS196742 1461 + 0.55373
bioB PD0043 biotin synthaseRecName: Full=Biotin synthase; EC=2.8.1.6; chromosome CDS57651 1026 + 0.513645
bioD PD1494 dethiobiotin synthetaseRecName: Full=ATP-dependent dethiobiotin synthetase BioD; EC=6.3.3.3; AltName: Full=DTB synthetase; Short=DTBS; AltName: Full=Dethiobiotin synthase; chromosome CDS1737166 681 + 0.584435
bioF PD0598 8-amino-7-oxononanoate synthaseRecName: Full=8-amino-7-oxononanoate synthase; Short=AONS; EC=2.3.1.47; AltName: Full=7-keto-8-amino-pelargonic acid synthase; Short=7-KAP synthase; Short=KAPA synthase; AltName: Full=8-amino-7-ketopelargonate synthase; chromosome CDS732180 1206 - 0.574627
birA PD1071 bifunctional transcriptional repressor of the biotin operon/biotin acetyl-CoA-carboxylase synthetaseSubName: Full=Bifunctional transcriptional repressor of the biotin operon/biotin acetyl-CoA-carboxylase synthetase; chromosome CDS1273448 954 + 0.507338
coaD PD0275 phosphopantetheine adenyltransferaseRecName: Full=Phosphopantetheine adenylyltransferase; EC=2.7.7.3; AltName: Full=Dephospho-CoA pyrophosphorylase; AltName: Full=Pantetheine-phosphate adenylyltransferase; Short=PPAT; chromosome CDS351807 489 + 0.541922
coaE PD1921 dephospho-CoA kinaseRecName: Full=Dephospho-CoA kinase; EC=2.7.1.24; AltName: Full=Dephosphocoenzyme A kinase; chromosome CDS2253607 639 - 0.536776
coq7 PD0753 ubiquinone biosynthesis proteinRecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; EC=1.14.13.-; AltName: Full=5-demethoxyubiquinone hydroxylase; Short=DMQ hydroxylase; chromosome CDS927076 579 + 0.535406
cysD PD0717 ATP sulfurylase small subunitRecName: Full=Sulfate adenylyltransferase subunit 2; EC=2.7.7.4; AltName: Full=ATP-sulfurylase small subunit; AltName: Full=Sulfate adenylate transferase; Short=SAT; chromosome CDS880240 915 + 0.526776
cysG PD1840 siroheme synthaseRecName: Full=Siroheme synthase; Includes: RecName: Full=Uroporphyrinogen-III C-methyltransferase; Short=Urogen III methylase; EC=2.1.1.107; AltName: Full=SUMT; AltName: Full=Uroporphyrinogen III methylase; Short=UROM; Includes: RecName: Full=Precorrin-2 dehydrogenase; EC=1.3.1.76; Includes: RecName: Full=Sirohydrochlorin ferrochelatase; EC=4.99.1.4; chromosome CDS2155838 1437 + 0.611691
cysH PD0714 3'-phosphoadenosine 5'-phosphosulfate reductaseRecName: Full=Phosphoadenosine phosphosulfate reductase; EC=1.8.4.8; AltName: Full=3-phosphoadenylylsulfate reductase; AltName: Full=PAPS reductase, thioredoxin dependent; AltName: Full=PAPS sulfotransferase; AltName: Full=PAdoPS reductase; chromosome CDS875664 714 - 0.54902
dfp PD0118 DNA/pantothenate metabolism flavoproteinSubName: Full=DNA/pantothenate metabolism flavoprotein; chromosome CDS150367 1230 + 0.554472
dxs PD1293 deoxyxylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS1510984 1908 - 0.525681
folA PD1363 dihydrofolate reductase type IIIRecName: Full=Dihydrofolate reductase; EC=1.5.1.3; chromosome CDS1586106 501 - 0.542914
folB PD1642 dihydroneopterin aldolaseSubName: Full=Dihydroneopterin aldolase; chromosome CDS1901641 363 - 0.479339
folC PD0854 folylpolyglutamate synthase/dihydrofolate synthaseSubName: Full=Folylpolyglutamate synthase/dihydrofolate synthase; chromosome CDS1061399 1326 - 0.517345
folD PD1449 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolaseRecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; EC=1.5.1.5; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase; EC=3.5.4.9; chromosome CDS1689544 876 - 0.545662
folE PD0823 GTP cyclohydrolase IRecName: Full=GTP cyclohydrolase 1; EC=3.5.4.16; AltName: Full=GTP cyclohydrolase I; Short=GTP-CH-I; chromosome CDS1014789 621 - 0.515298
folK PD0676 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinaseSubName: Full=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; chromosome CDS830202 609 + 0.509031
folK PD0186 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinaseSubName: Full=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; chromosome CDS236206 498 + 0.546185
folP PD0068 dihydropteroate synthaseSubName: Full=Dihydropteroate synthase; chromosome CDS89434 897 - 0.54961
gshB PD0844 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; chromosome CDS1046373 945 - 0.537566
gshI PD0655 glutamate-cysteine ligase precursorSubName: Full=Glutamate-cysteine ligase; chromosome CDS803599 1365 - 0.557509
hemA PD2021 glutamyl-tRNA reductaseRecName: Full=Glutamyl-tRNA reductase; Short=GluTR; EC=1.2.1.70; chromosome CDS2377260 1299 + 0.56505
hemB PD1331 delta-aminolevulinic acid dehydrataseSubName: Full=Delta-aminolevulinic acid dehydratase; chromosome CDS1558497 1005 + 0.516418
hemC PD1152 hydroxymethylbilane synthaseRecName: Full=Porphobilinogen deaminase; Short=PBG; EC=2.5.1.61; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; chromosome CDS1349775 918 - 0.554466
hemD PD1068 uroporphyrinogen-III synthaseSubName: Full=Uroporphyrinogen-III synthase; chromosome CDS1270076 774 + 0.534884
hemE PD0580 uroporphyrinogen decarboxylaseRecName: Full=Uroporphyrinogen decarboxylase; Short=UPD; Short=URO-D; EC=4.1.1.37; chromosome CDS711424 1065 - 0.584977
hemF PD0015 coproporphyrinogen III oxidase, aerobicRecName: Full=Oxygen-dependent coproporphyrinogen-III oxidase; Short=CPO; Short=Coprogen oxidase; Short=Coproporphyrinogenase; EC=1.3.3.3; chromosome CDS17033 918 + 0.538126
hemH PD1576 ferrochelataseRecName: Full=Ferrochelatase; EC=4.99.1.1; AltName: Full=Heme synthase; AltName: Full=Protoheme ferro-lyase; chromosome CDS1826444 963 - 0.555556
hemL PD1335 glutamate-1-semialdehyde 2,1-aminomutaseRecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase; Short=GSA; EC=5.4.3.8; AltName: Full=Glutamate-1-semialdehyde aminotransferase; Short=GSA-AT; chromosome CDS1561811 1335 + 0.56779
hemN PD0724 coproporphyrinogen III oxidaseSubName: Full=Coproporphyrinogen III oxidase; chromosome CDS887101 1152 + 0.534722
hemY PD1070 porphyrin biosynthesis proteinSubName: Full=Porphyrin biosynthesis protein; chromosome CDS1271874 1170 + 0.489744
hetI PD0863 HetI proteinSubName: Full=HetI protein; chromosome CDS1074009 594 - 0.569024
ilvC PD1043 ketol-acid reductoisomeraseRecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; chromosome CDS1245113 1053 + 0.496676
ilvE PD0810 branched-chain amino acid aminotransferaseRecName: Full=Branched-chain-amino-acid aminotransferase; EC=2.6.1.42; chromosome CDS997993 1089 + 0.549128
ilvG PD1044 acetolactate synthase isozyme II large subunitRecName: Full=Acetolactate synthase; EC=2.2.1.6; chromosome CDS1246212 1752 + 0.548516
ispA PD1512 geranyltranstransferaseSubName: Full=Geranyltranstransferase; chromosome CDS1757774 876 - 0.583333
ispB PD0625 octaprenyl-diphosphate synthaseSubName: Full=Octaprenyl-diphosphate synthase; chromosome CDS772129 1002 - 0.54491
lipA PD0530 lipoic acid synthetaseRecName: Full=Lipoyl synthase; EC=2.8.1.8; AltName: Full=Lip-syn; Short=LS; AltName: Full=Lipoate synthase; AltName: Full=Lipoic acid synthase; AltName: Full=Sulfur insertion protein LipA; chromosome CDS651424 1122 - 0.532086
lipB PD0531 lipoate-protein ligase BRecName: Full=Octanoyltransferase; EC=2.3.1.181; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase; chromosome CDS652582 690 - 0.582609
metK PD1677 methionine adenosyltransferaseRecName: Full=S-adenosylmethionine synthase; Short=AdoMet synthase; EC=2.5.1.6; AltName: Full=MAT; AltName: Full=Methionine adenosyltransferase; chromosome CDS1944715 1212 - 0.474422
moeB PD0756 molybdopterin biosynthesis proteinSubName: Full=Molybdopterin biosynthesis protein; chromosome CDS931297 831 - 0.489771
moeB PD1618 molybdopterin biosynthesis proteinSubName: Full=Molybdopterin biosynthesis protein; chromosome CDS1873767 885 + 0.59887
mutT PD0412 DGTP-pyrophosphohydrolaseSubName: Full=DGTP-pyrophosphohydrolase; chromosome CDS506922 963 + 0.589823
nadA PD0869 quinolinate synthetase ARecName: Full=Quinolinate synthase A; EC=2.5.1.72; chromosome CDS1081031 1020 - 0.491176
nadB PD0868 L-aspartate oxidaseRecName: Full=L-aspartate oxidase; Short=LASPO; EC=1.4.3.16; AltName: Full=Quinolinate synthase B; chromosome CDS1079480 1539 - 0.554256
nadC PD0867 nicotinate-mononucleotide pyrophosphorylaseSubName: Full=Nicotinate-mononucleotide pyrophosphorylase; chromosome CDS1078612 867 - 0.510957
nadD PD1233 nicotinate-nucleotide adenyltransferaseRecName: Full=Probable nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18; AltName: Full=Deamido-NAD(+) diphosphorylase; AltName: Full=Deamido-NAD(+) pyrophosphorylase; AltName: Full=Nicotinate mononucleotide adenylyltransferase; Short=NaMN adenylyltransferase; chromosome CDS1436241 669 + 0.573991
panB PD0187 3-methyl-2-oxobutanoate hydroxymethyltransferaseRecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; EC=2.1.2.11; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT; chromosome CDS236736 819 + 0.547009
panC PD0188 pantoate--beta-alanine ligaseRecName: Full=Pantothenate synthetase; Short=PS; EC=6.3.2.1; AltName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; chromosome CDS237551 846 + 0.521277
panD PD0189 aspartate 1-decarboxylase precursorRecName: Full=Aspartate 1-decarboxylase; EC=4.1.1.11; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Precursor; chromosome CDS238479 381 + 0.488189
pdxA PD1834 pyridoxal phosphate biosynthetic proteinRecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase; EC=1.1.1.262; AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase; chromosome CDS2146704 993 - 0.585096
pdxH PD0583 pyridoxamine 5'-phosphate oxidaseRecName: Full=Pyridoxine/pyridoxamine 5-phosphate oxidase; EC=1.4.3.5; AltName: Full=PNP/PMP oxidase; Short=PNPOx; AltName: Full=Pyridoxal 5-phosphate synthase; chromosome CDS714747 627 + 0.54386
pdxJ PD0040 pyridoxal phosphate biosynthetic proteinRecName: Full=Pyridoxine 5-phosphate synthase; Short=PNP synthase; EC=2.6.99.2; chromosome CDS53424 783 + 0.514687
phhB PD1980 pterin-4-alpha-carbinolamine dehydrataseRecName: Full=Putative pterin-4-alpha-carbinolamine dehydratase; Short=PHS; EC=4.2.1.96; AltName: Full=4-alpha-hydroxy-tetrahydropterin dehydratase; AltName: Full=Pterin carbinolamine dehydratase; Short=PCD; chromosome CDS2328245 351 + 0.492877
pncB PD0393 nicotinate phosphoribosyltransferaseRecName: Full=Nicotinate phosphoribosyltransferase; Short=NAPRTase; EC=6.3.4.21; chromosome CDS476588 1185 + 0.50211
pspA PD0986 hemagglutinin-like secreted proteinSubName: Full=Hemagglutinin-like secreted protein; chromosome CDS1181580 1185 - 0.600844
ribA PD1745 GTP cyclohydrolase IISubName: Full=GTP cyclohydrolase II; chromosome CDS2031293 1134 - 0.565256
ribA PD0817 riboflavin biosynthesis proteinRecName: Full=GTP cyclohydrolase-2; EC=3.5.4.25; AltName: Full=GTP cyclohydrolase II; chromosome CDS1004851 1197 - 0.570593
ribC PD1746 riboflavin synthase alpha chainSubName: Full=Riboflavin synthase alpha chain; chromosome CDS2032423 603 - 0.555556
ribD PD1747 riboflavin-specific deaminaseRecName: Full=Riboflavin biosynthesis protein RibD; chromosome CDS2033613 1095 - 0.589954
ribF PD1438 riboflavin kinase / FAD synthetaseSubName: Full=Riboflavin kinase / FAD synthetase; chromosome CDS1675192 948 - 0.580169
ribH PD1744 6,7-dimethyl-8-ribityllumazine synthase/riboflavin synthase beta subunitRecName: Full=6,7-dimethyl-8-ribityllumazine synthase; Short=DMRL synthase; Short=LS; Short=Lumazine synthase; EC=2.5.1.78; chromosome CDS2030798 465 - 0.550538
rimK PD1918 ribosomal protein S6 modification proteinRecName: Full=Probable alpha-L-glutamate ligase; EC=6.3.2.-; chromosome CDS2249743 906 + 0.549669
serA PD1255 D-3-phosphoglycerate dehydrogenaseSubName: Full=D-3-phosphoglycerate dehydrogenase; chromosome CDS1464237 1242 + 0.543478
serC PD1358 phosphoserine aminotransferaseRecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; Short=PSAT; chromosome CDS1579556 1089 - 0.511478
thiC PD0903 thiamine biosynthesis proteinRecName: Full=Phosphomethylpyrimidine synthase; EC=4.1.99.17; AltName: Full=Hydroxymethylpyrimidine phosphate synthase; Short=HMP-P synthase; Short=HMP-phosphate synthase; Short=HMPP synthase; AltName: Full=Thiamine biosynthesis protein ThiC; chromosome CDS1112871 1857 - 0.517501
thiD PD1534 phosphomethylpyrimidine kinaseSubName: Full=Phosphomethylpyrimidine kinase; chromosome CDS1778270 825 + 0.547879
thiE PD1687 thiamin-phosphate pyrophosphorylaseRecName: Full=Thiamine-phosphate synthase; Short=TP synthase; Short=TPS; EC=2.5.1.3; AltName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP pyrophosphorylase; Short=TMP-PPase; chromosome CDS1959397 705 + 0.512057
thiG PD1877 thiamine biosynthesis proteinRecName: Full=Thiazole synthase; EC=2.8.1.10; chromosome CDS2207004 828 - 0.539855
thiL PD1742 thiamine-monophosphate kinaseRecName: Full=Thiamine-monophosphate kinase; Short=TMP kinase; Short=Thiamine-phosphate kinase; EC=2.7.4.16; chromosome CDS2029263 975 - 0.555897
trpD PD0171 anthranilate synthase component IISubName: Full=Anthranilate synthase component II; chromosome CDS217913 585 + 0.494017
trpD PD0876 anthranilate synthase component IISubName: Full=Anthranilate synthase component II; chromosome CDS1087303 621 - 0.381643
trpE PD0170 anthranilate synthase component ISubName: Full=Anthranilate synthase component I; chromosome CDS216280 1476 + 0.51084
trpE PD1500 anthranilate synthase component ISubName: Full=Anthranilate synthase component I; chromosome CDS1740832 1359 - 0.544518
ubiA PD0046 hydroxybenzoate octaprenyltransferaseRecName: Full=4-hydroxybenzoate octaprenyltransferase; EC=2.5.1.-; AltName: Full=4-HB polyprenyltransferase; chromosome CDS60887 900 - 0.537778
ubiE PD0704 ubiquinone/menaquinone transferaseRecName: Full=Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; EC=2.1.1.163; EC=2.1.1.201; AltName: Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; AltName: Full=Demethylmenaquinone methyltransferase; chromosome CDS861678 762 + 0.531496
ubiF PD1838 oxygenaseSubName: Full=Oxygenase; chromosome CDS2153165 1182 + 0.605753
ubiG PD1488 3-demethylubiquinone-9 3-methyltransferaseRecName: Full=Ubiquinone biosynthesis O-methyltransferase; AltName: Full=2-polyprenyl-6-hydroxyphenol methylase; EC=2.1.1.222; AltName: Full=3-demethylubiquinone 3-O-methyltransferase; EC=2.1.1.64; chromosome CDS1731220 741 - 0.565452
ubiH PD1837 2-octaprenyl-6-methoxyphenol hydroxylaseSubName: Full=2-octaprenyl-6-methoxyphenol hydroxylase; chromosome CDS2151960 1209 + 0.616212
ygcM PD0158 6-pyruvoyl tetrahydrobiopterin synthaseRecName: Full=6-carboxy-5,6,7,8-tetrahydropterin synthase; EC=4.-.-.-; chromosome CDS201951 357 + 0.484594