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2024-04-29 07:11:13

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343

Number of genes found: 129

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Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BF0767 possible methyltransferasechromosome CDS940211 1254 + 0.463317
NA BF0071 putative2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (HPPK)chromosome CDS68888 462 + 0.448052
NA BF3503 putative prenyltransferasechromosome CDS4124573 897 + 0.465998
NA BF0770 putative methylcobamide:CoM methyltransferasechromosome CDS943009 1005 + 0.469652
NA BF2850 putative folylpolyglutamate synthasechromosome CDS3312041 1377 + 0.46841
NA BF0880 putative 5-formyltetrahydrofolate cyclo-ligasechromosome CDS1100575 456 - 0.467105
NA BF0632 putative biotin/lipoate A/B protein ligase family proteinchromosome CDS770407 756 - 0.420635
NA BF0105 putative octaprenyl-diphosphate synthasechromosome CDS111567 975 + 0.421538
NA BF3772 putative branched-chain amino acid aminotransferasechromosome CDS4455541 1020 - 0.478431
NA BF2520 putative cobalamin 5'-phosphate synthasechromosome CDS2934202 744 + 0.482527
NA BF0386 putative ThiF family proteinchromosome CDS474280 711 + 0.45007
NA BF2461 putative 8-amino-7-oxononanoate synthasechromosome CDS2860810 1185 - 0.412658
NA BF0592 putative surface membrane proteinchromosome CDS710756 2859 - 0.38405
NA BF3622 putative dihydroneopterin aldolasechromosome CDS4278127 369 + 0.485095
NA BF0997 putative 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS1249182 1098 + 0.479053
NA BF4169 putative TonB-linked outer membrane proteinchromosome CDS4911407 2997 - 0.528862
NA BF2550 putative bifunctional CbiD/CbiJ cobalamin biosynthesis proteinchromosome CDS2973266 1929 + 0.499222
NA BF0090 conserved hypothetical proteinchromosome CDS93863 759 + 0.466403
NA BF2327 putative lipoproteinchromosome CDS2721611 633 - 0.42496
NA BF2336 conserved hypothetical proteinchromosome CDS2727736 597 + 0.355109
NA BF2146 putative RibD-family proteinchromosome CDS2495657 678 + 0.5
NA BF3275 putative thiamine monophosphate kinasechromosome CDS3862130 1035 + 0.450242
NA BF2563 putative molybdopterin biosynthesis-related proteinchromosome CDS2988521 702 + 0.514245
NA BF3444 putative membrane proteinchromosome CDS4066003 3051 + 0.456244
NA BF4334 putative phosphopantetheine adenylyltransferasechromosome CDS5156798 453 + 0.459161
NA BF2557 putative thiamine biosynthesis-related proteinchromosome CDS2983303 198 + 0.510101
NA BF2901 putative uroporphirinogen biosynthesis-related proteinchromosome CDS3368080 1005 - 0.419901
NA BF2028 putative aminotransferasechromosome CDS2372222 1272 + 0.404874
NA BF0564 putative nicotinamide mononucleotide transporterchromosome CDS671446 573 - 0.502618
NA BF0898 putative lipoic acid synthetasechromosome CDS1126060 867 - 0.490196
NA BF3740 putative pyridoxine biosynthesis proteinchromosome CDS4408272 714 - 0.455182
NA BF3664 putative thiamine biosyntehsis related proteinchromosome CDS4325008 1419 + 0.469345
NA BF1983 putative protoporphyrinogen oxidasechromosome CDS2316497 1389 - 0.468682
NA BF1944 putative glycerate dehydrogenasechromosome CDS2267796 957 - 0.506792
NA BF4330 putative transmembrane ion channelchromosome CDS5150802 1782 - 0.475309
NA BF3400 putative 6-pyruvoyl tetrahydropterin synthasechromosome CDS4010975 333 - 0.435435
NA BF4366 putative 2-dehydropantoate 2-reductasechromosome CDS5191668 930 + 0.470968
NA BF3058 putative methenyltetrahydrofolate cyclohydrolasechromosome CDS3558939 882 + 0.505669
NA BF1255 conserved hypothetical proteinchromosome CDS1514225 447 - 0.422819
NA BF1051 putative 3,4-dihydroxy-2-butanone 4-phosphate/shikimate 5-dehydrogenase fusion proteinchromosome CDS1303444 1491 - 0.474849
NA BF1559 hypothetical proteinchromosome CDS1815963 954 + 0.344864
NA BF2335 putative para-aminobenzoate synthase component Ichromosome CDS2726769 984 + 0.364837
NA BF0839 putative ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS1032628 738 - 0.429539
NA BF3663 putative biotin biosynthesis-related proteinchromosome CDS4323949 1047 + 0.488061
NA BF0452 putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminasechromosome CDS532845 1023 - 0.450635
NA BF2558 putative thiamine-phosphate pyrophosphorylasechromosome CDS2983504 615 + 0.534959
NA BF1942 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS2265027 1242 + 0.491143
NA BF3546 putative reductoisomerasechromosome CDS4174221 1089 - 0.467401
NA BF2283 putative transport-related membrane proteinchromosome CDS2675685 1437 + 0.419624
NA BF2709 putative cobalamin biosynthesis-related proteinchromosome CDS3151439 4320 + 0.502546
NA BF2904 putative methyltransferasechromosome CDS3370437 1251 - 0.455635
NA BF1169 putative dephospho-CoA kinasechromosome CDS1425506 618 + 0.414239
NA BF1573 conserved hypothetical proteinchromosome CDS1829523 675 + 0.448889
NA BF1300 possible isochorismate synthasechromosome CDS1558286 1107 + 0.497742
NA BF2519 putative phosphoribosyltransferasechromosome CDS2933152 1038 + 0.49422
NA BF2540 putative cobalt chelatasechromosome CDS2958496 834 + 0.458034
NA BF4344 putative TonB-dependent outer membrane receptor proteinchromosome CDS5167179 2418 - 0.445823
NA BF1940 conserved hypothetical proteinchromosome CDS2263143 1011 + 0.493571
NA BF3638 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS4294793 1134 + 0.491182
NA BF2548 putative bifunctional CbiE/CbiT cobalamin biosynthesis proteinchromosome CDS2970153 1305 + 0.511111
NA BF2248 putative iron transport related ATP-binding proteinchromosome CDS2627231 1029 + 0.48688
NA BF3395 putative pyridoxine kinasechromosome CDS4006666 873 - 0.461627
NA BF2942 putative exported proteinchromosome CDS3416620 3378 - 0.405269
NA BF2088 putative lipoate-protein ligasechromosome CDS2443202 666 + 0.498498
NA BF4114 putative 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS4842896 1761 - 0.407723
NA BF0563 conserved hypothetical proteinchromosome CDS670836 624 - 0.519231
NA BF0075 possible uroporphyrinogen-III synthasechromosome CDS72584 753 + 0.411687
NA BF2549 putative bifunctional CbiF/CbiG cobalamin biosynthesis proteinchromosome CDS2971464 1800 + 0.505
NA BF1732 conserved hypothetical proteinchromosome CDS2024498 492 + 0.585366
NA BF2543 putative cobalamin biosynthesis-related membrane proteinchromosome CDS2963154 3939 + 0.462046
NA BF3861 putative pyridoxal kinasechromosome CDS4550648 873 - 0.465063
NA BF3533 putative isoprenoid biosynthesis related proteinchromosome CDS4157110 975 - 0.437949
NA BF2522 putative cobalamin biosynthesis proteinchromosome CDS2935471 933 - 0.506967
NA BF2245 putative cobalamin synthesis related methyltransferase proteinchromosome CDS2624209 708 - 0.474576
NA BF3075 conserved hypothetical proteinchromosome CDS3576977 2043 - 0.445913
NA BF2468 putative ABC transport system, ATP-binding proteinchromosome CDS2868289 621 + 0.438003
NA BF0926 putative NADPH-dependent glutamate synthasechromosome CDS1157937 2289 - 0.481433
NA BF1310 putative outer membrane proteinchromosome CDS1570137 3306 + 0.438899
NA BF2564 putative thiamine phosphate pyrophosphorylasechromosome CDS2989284 609 + 0.436782
apbE BF1148 putative thiamine biosynthesis lipoproteinchromosome CDS1407390 1041 - 0.410183
bioA BF1617 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS1883203 2247 - 0.527815
bioD BF1614 putative dethiobiotin synthetasechromosome CDS1879712 642 - 0.509346
bioF BF1616 putative 8-amino-7-oxononanoate synthasechromosome CDS1881871 1194 - 0.485762
btuB BF1583 putative vitamin B12 receptorchromosome CDS1841583 2037 - 0.519391
cbiP BF2524 cobyric acid synthasechromosome CDS2937469 1488 - 0.510753
cobB BF2534 cobyrinic acid A,C-diamide synthasechromosome CDS2949950 1335 - 0.483146
cobJ BF2547 precorrin-3B C17-methyltransferasechromosome CDS2968687 1410 + 0.502837
cobP BF2518 bifunctional cobalamin biosynthesis proteinchromosome CDS2932611 519 + 0.489403
cysD BF1676 putative sulfate adenylyltransferase subunit 2chromosome CDS1951189 912 + 0.447368
dfp BF2855 DNA/pantothenate metabolism flavoproteinchromosome CDS3318273 1194 - 0.471524
dfrA BF3524 putative dihydrofolate reductasechromosome CDS4149982 501 + 0.497006
dxs BF0796 putative 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS975934 1947 - 0.495634
folE BF3727 putative GTP cyclohydrolase Ichromosome CDS4397363 585 - 0.432479
folP BF0396 putative dihydropteroate synthasechromosome CDS485894 861 + 0.473868
hemN BF1984 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS2317888 1365 - 0.43956
ilvB BF3550 putative acetolactate synthase large subunitchromosome CDS4177266 1698 - 0.491755
kbl BF2864 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3327709 1188 + 0.492424
ldhA BF1389 putative D-lactate dehydrogenasechromosome CDS1656510 1011 - 0.462908
lplA BF1632 putative lipoate-protein ligasechromosome CDS1906200 702 + 0.474359
menB BF1303 putative naphthoate synthasechromosome CDS1562108 825 + 0.493333
menD BF1301 putative menaquinone biosynthesis proteinchromosome CDS1559413 1668 + 0.483813
metK BF0072 putative S-adenosylmethionine synthetasechromosome CDS69732 1293 + 0.456303
nadA BF4375 putative quinolinate synthetase Achromosome CDS5203758 993 - 0.452165
nadB BF0021 putative exported L-aspartate oxidasechromosome CDS25759 1572 - 0.458651
nadC BF1400 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] (quinolinate phosphoribosyltransferase [decarboxylating])chromosome CDS1665607 840 + 0.482143
nadD BF3501 putative nicotinate-nucleotide adenylyltransferasechromosome CDS4122812 606 + 0.462046
paaK1 BF2641 putative phenylacetate-coenzyme A ligasechromosome CDS3072430 1299 - 0.441878
paaK2 BF1700 putative phenylacetate-coenzyme A ligasechromosome CDS1978547 1308 - 0.441132
panB BF2220 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS2593904 822 + 0.447689
panC BF0924 putative pantoate--beta-alanine ligasechromosome CDS1156530 849 + 0.434629
panD BF0925 putative aspartate 1-decarboxylase precursorchromosome CDS1157401 354 + 0.418079
pdxB BF0181 putative erythronate-4-phosphate dehydrogenasechromosome CDS197279 1047 - 0.445081
pdxH BF1385 putative pyridoxamine 5'-phosphate oxidasechromosome CDS1652013 708 - 0.529661
pncB BF3334 putative nicotinate phosphoribosyltransferasechromosome CDS3933580 1167 + 0.465296
poxB BF3217 putative pyruvate dehydrogenase [cytochrome]chromosome CDS3782854 1740 + 0.484483
pyrK BF2482 putative dihydroorotate dehydrogenase electron transfer subunitchromosome CDS2883232 777 + 0.428571
ribA BF0544 putative riboflavin biosynthesis protein [includes: GTP cyclohydrolase ii; 3,4-dihydroxy-2-butanone 4-phosphate synthase (dhbp synthase)]chromosome CDS646049 1215 + 0.455967
ribE BF2767 riboflavin synthase alpha chainchromosome CDS3225615 603 - 0.467662
ribF BF4147 putative riboflavin biosynthesis protein RibFchromosome CDS4879536 942 - 0.463907
ribH BF0875 putative 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS1096844 495 - 0.40404
sahH BF4263 putative adenosylhomocysteinasechromosome CDS5058813 1419 + 0.474982
serA BF2073 putative D-3-phosphoglycerate dehydrogenasechromosome CDS2426073 921 + 0.472313
serC BF2072 putative phosphoserine aminotransferasechromosome CDS2424892 1068 + 0.483146
thiC BF2560 thiamine biosynthesis protein ThiCchromosome CDS2985122 1695 + 0.541593
thiD BF2353 phosphomethylpyrimidine kinasechromosome CDS2744913 834 - 0.468825
thiG BF2559 thiazole biosynthesis protein ThiGchromosome CDS2984260 777 + 0.545689
thiH BF2562 thiazole biosynthesis protein ThiHchromosome CDS2987374 1125 + 0.501333
trpE BF2673 anthranilate synthase component Ichromosome CDS3114701 1407 + 0.506041
trpG BF2674 glutamine amidotransferasechromosome CDS3116241 606 + 0.49505