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2024-05-06 08:09:12

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Desulfotalea psychrophila LSv54, LSv54

Number of genes found: 136

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Desulfotalea psychrophila LSv54, LSv54
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DP0296 probable lipoic acid synthetase (LipA)chromosome CDS323802 900 - 0.543333
NA DP0211 probable precorrin-2 C20-methyltransferase (CobI)chromosome CDS227940 648 - 0.555556
NA DP0254 related to isochorismate synthase (MenF)chromosome CDS274924 1152 - 0.513021
NA DP2548 probable Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (BioA)chromosome CDS2902496 1308 - 0.528287
NA DP2824 probable delta-aminolevulinic acid dehydratasechromosome CDS3185027 981 + 0.494393
NA DP0705 similar to dihydrofolate reductasechromosome CDS780105 540 + 0.481481
NA DP2878 related to folylpolyglutamate synthasechromosome CDS3248268 1326 - 0.516591
NA DP1709 related to D-3-phosphoglycerate dehydrogenasechromosome CDS1918390 1182 + 0.414552
NA DP3079 related to glutamyl-tRNA reductasechromosome CDS3477934 1281 - 0.491023
NA DP1685 related to thiamin biosynthesis protein (ThiF)chromosome CDS1885476 873 + 0.457045
NA DP1951 related to cobalamin synthase (CobS)chromosome CDS2216160 774 - 0.511628
NA DP1942 probable aspartate-1-decarboxylasechromosome CDS2204039 465 - 0.419355
NA DP0253 related to menaquinone biosynthesis protein (MenD)chromosome CDS273237 1614 - 0.542751
NA DP0216 probable Fe(III) ABC transporter, ATP-binding proteinchromosome CDS232249 849 + 0.548881
NA DP1743 related to octaprenyl-diphosphate synthasechromosome CDS1959753 1011 - 0.514342
NA DPPB98 probable dihydrofolate reductaseLSv54, large plasmid CDS118110 600 + 0.395
NA DP1795 probable nicotinate-nucleotide pyrophosphorylasechromosome CDS2025820 846 - 0.508274
NA DP1933 probable phosphoserine aminotransferasechromosome CDS2193881 1086 + 0.445672
NA DP2763 probable cobyrinic acid A,C-diamide synthase (CobB)chromosome CDS3126570 1386 - 0.52381
NA DP2477 similar to molybdopterin converting factor, subunit 1chromosome CDS2829438 231 + 0.415584
NA DP2330 related to indole-3-pyruvate decarboxylasechromosome CDS2661903 1641 - 0.546009
NA DP1094 related to riboflavin kinase (FAD synthetase)chromosome CDS1236574 975 + 0.443077
NA DP0862 related to molybdopterin biosynthesis protein moeAchromosome CDS967501 1188 + 0.559764
NA DP0701 probable 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS773812 645 + 0.514729
NA DP0801 probable S-adenosylmethionine synthetasechromosome CDS901128 1197 - 0.49457
NA DP0877 probable para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component IIchromosome CDS984369 579 - 0.514681
NA DP2498 probable thiamine biosynthesis protein (ThiC)chromosome CDS2847378 1305 - 0.463602
NA DP2547 probable 8-amino-7-oxononanoate synthase (BioF)chromosome CDS2901330 1170 - 0.530769
NA DP1620 probable para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component IIchromosome CDS1805415 642 + 0.504673
NA DP0330 related to ABC transporter, permease proteinchromosome CDS356413 705 - 0.470922
NA DP0876 probable para-aminobenzoate synthase, component Ichromosome CDS983404 963 - 0.49325
NA DP0646 probable 5-formyltetrahydrofolate cyclo-ligasechromosome CDS707927 576 - 0.366319
NA DP0476 conserved hypothetical proteinchromosome CDS502689 1509 - 0.490391
NA DP2769 probable acetolactate synthase isozyme III, large subunit (IlvI)chromosome CDS3134927 1839 + 0.485046
NA DP2808 related to 4-hydroxythreonine-4-phosphate dehydrogenase (PdxA)chromosome CDS3164307 999 + 0.506507
NA DP0071 related to 2-dehydropantoate 2-reductasechromosome CDS79395 924 + 0.514069
NA DP0499 probable hydroxyethylthiazole kinasechromosome CDS530598 912 + 0.519737
NA DP1952 related to nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (CobT)chromosome CDS2216950 1068 - 0.511236
NA DP1280 probable uroporphyrinogen decarboxylasechromosome CDS1429161 1020 - 0.520588
NA DP1332 related to 2-heptaprenyl-1,4-naphthoquinone methyltransferasechromosome CDS1487052 741 + 0.496626
NA DP1100 probable riboflavin biosynthesis protein (RibA)chromosome CDS1240912 1257 + 0.463803
NA DP2729 conserved hypothetical proteinchromosome CDS3091534 600 - 0.483333
NA DP1619 probable anthranilate synthase, component Ichromosome CDS1803916 1497 + 0.51169
NA DP1738 hypothetical proteinchromosome CDS1955693 201 + 0.412935
NA DP2990 probable molybdopterin biosynthesis protein (MoeA)chromosome CDS3380632 1236 - 0.517799
NA DP1089 probable thiamine phosphate pyrophosphorylase (ThiE)chromosome CDS1230028 723 + 0.511757
NA DP1266 probable coenzyme F390 synthetase IIchromosome CDS1412889 1335 + 0.482397
NA DP2907 probable 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS3287386 855 - 0.526316
NA DP1953 related to bifunctional cobalamin biosynthesis protein (CobP)chromosome CDS2218184 540 - 0.490741
NA DP2587 related to nicotinate-nucleotide adenylyltransferasechromosome CDS2944216 651 - 0.456221
NA DP1739 probable 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein (ThiG)chromosome CDS1955886 792 + 0.549242
NA DP0716 related to oxygen-independent coproporphyrinogen III oxidasechromosome CDS792075 1164 + 0.527491
NA DP0800 related to BirA bifunctional proteinchromosome CDS900252 753 + 0.49004
NA DP0727 probable ketol-acid reductoisomerasechromosome CDS803981 798 + 0.469925
NA DP1082 unknown proteinchromosome CDS1220145 531 + 0.46516
NA DP1673 probable DNA/pantothenate metabolism flavoproteinchromosome CDS1870742 1212 + 0.506601
NA DP0726 probable ketol-acid reductoisomerasechromosome CDS803305 714 + 0.464986
NA DP0875 conserved hypothetical proteinchromosome CDS982818 603 - 0.504146
NA DP1901 probable methylenetetrahydrofolate dehydrogenasechromosome CDS2140533 942 + 0.45966
NA DP2376 conserved hypothetical proteinchromosome CDS2713430 1128 - 0.519504
NA DP1272 probable coenzyme F390 synthetasechromosome CDS1418411 1299 + 0.485758
NA DP2092 probable lipoate-protein ligasechromosome CDS2382979 1017 - 0.477876
NA DP0252 probable naphthoate synthase (MenB)chromosome CDS272268 816 - 0.492647
NA DP0872 probable acetolactate synthase, large subunitchromosome CDS978831 1797 - 0.535337
NA DP1483 probable molybdenum cofactor biosynthesis protein C (MoaC)chromosome CDS1654699 495 + 0.440404
NA DP2544 probable dethiobiotin synthase (BioD)chromosome CDS2899186 672 - 0.501488
NA DP1721 probable molybdopterin biosynthesis proteinchromosome CDS1936131 1023 - 0.537634
NA DP0776 related to thiamine biosynthesis lipoprotein (ApbE) [Precursor]chromosome CDS873055 1038 + 0.453757
NA DP0277 related to protoporphyrinogen oxidasechromosome CDS300360 1398 + 0.530043
NA DP1101 probable riboflavin synthase, beta chainchromosome CDS1242223 468 + 0.470085
NA DP0222 probable precorrin-4 C11-methyltransferase (CobM)chromosome CDS238262 774 + 0.583979
NA DP0922 probable 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS1033661 894 + 0.49217
NA DP0311 probable dihydrofolate reductase, type VIIchromosome CDS340800 474 + 0.438819
NA DP2875 similar to molybdenum cofactor biosynthesis proteinchromosome CDS3246183 363 + 0.402204
NA DP2474 related to molybdenum cofactor biosynthesis protein (MoeA)chromosome CDS2824397 1266 + 0.547393
NA DP2377 probable thiazole biosynthesis protein (ThiH)chromosome CDS2714557 1437 - 0.512178
NA DP0224 probable precorrin-3B C17-methyltransferase (CobJ)chromosome CDS239958 771 + 0.568093
NA DP2526 probable quinolinate synthetase Achromosome CDS2878218 1059 + 0.527856
NA DP0592 related to cobalt chelatasechromosome CDS649294 759 - 0.529644
NA DP0264 related to coenzyme F390 synthetasechromosome CDS283655 1302 - 0.577573
NA DP1085 probable ferrochelatasechromosome CDS1223711 963 - 0.518172
NA DP0223 probable cobalamin biosynthesis protein (CbiG)chromosome CDS239032 1005 + 0.559204
NA DP0331 conserved hypothetical proteinchromosome CDS357285 897 - 0.467113
NA DP0221 probable precorrin-6Y C5,15-methyltransferase (CobL)chromosome CDS237057 1209 + 0.542597
NA DP2397 probable molybdopterin biosynthesis protein (Mog)chromosome CDS2736712 540 - 0.490741
NA DP0460 probable sodium/pantothenate symporterchromosome CDS487023 1431 - 0.525507
NA DP0430 probable2-amino-4-hydroxy-6-hydroxymethyldihydro pteridinepyrophosphokinasechromosome CDS457807 528 - 0.524621
NA DP2475 related to molybdopterin biosynthesis protein (MoeA)chromosome CDS2825693 1935 + 0.540052
NA DP1766 related to molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS1991770 657 - 0.479452
NA DP0218 probable cobyrinic acid A,C-diamide synthase (CobB)chromosome CDS233941 1431 + 0.549965
NA DP3086 related to biotin acetyl-CoA carboxylase ligasechromosome CDS3484339 927 - 0.481122
NA DP0001 related to methyltransferasechromosome CDS94 681 - 0.488987
NA DP2774 probable phosphopantetheine adenylyltransferasechromosome CDS3139431 513 + 0.440546
NA DP2842 unknown proteinchromosome CDS3208795 936 - 0.495726
NA DP0475 conserved hypothetical proteinchromosome CDS501742 945 - 0.536508
NA DP0220 probable cobalamin biosynthesis protein (CbiD)chromosome CDS235976 1089 + 0.571166
NA DP0297 probable lipoate-protein ligase B (LipB)chromosome CDS324719 672 - 0.508929
NA DP0711 probable L-aspartate oxidase (NadB)chromosome CDS786865 1590 + 0.479874
NA DP0137 conserved hypothetical proteinchromosome CDS153897 765 + 0.513726
NA DP2699 probable geranylgeranyl pyrophosphate synthasechromosome CDS3059509 897 + 0.496098
NA DP2978 related to iron (III) ABC transporter, ATP-binding proteinchromosome CDS3366699 1344 - 0.513393
NA DP0219 probable precorrin-8X methylmutase (CobH)chromosome CDS235347 633 + 0.565561
NA DP1734 probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA)chromosome CDS1951494 1563 + 0.484325
NA DP2700 probable 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS3060429 1938 + 0.50516
NA DP0212 probable cobalt chelatase, chain Achromosome CDS228791 1011 - 0.487636
NA DP0602 probable porphobilinogen deaminasechromosome CDS659183 942 + 0.55414
NA DP2172 probable molybdenum cofactor biosynthesis protein A (MoaA)chromosome CDS2492782 1227 - 0.440098
NA DP0812 probable glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS914230 1293 + 0.484919
NA DP1099 probable riboflavin synthase, alpha chainchromosome CDS1240226 669 + 0.463378
NA DP0085 related to D-alanine aminotransferasechromosome CDS94234 852 + 0.53169
NA DP2168 probable COB(I)alamin adenosyltransferase (CobO)chromosome CDS2489552 531 - 0.483992
NA DP2266 related to 6-pyruvoyltetrahydropterin synthase (partial length)chromosome CDS2601125 156 - 0.467949
NA DP2549 related to biotin synthetase (BioB)chromosome CDS2903793 1011 - 0.500495
NA DPPB42 Predicted orfLSv54, large plasmid CDS42879 1017 + 0.484759
NA DP0165 related to 6-pyruvoyl tetrahydropterin synthasechromosome CDS184324 411 + 0.486618
NA DP1949 related to cobalamin biosynthesis protein (CobD)chromosome CDS2212536 993 - 0.488419
NA DP1943 probable pantoate-beta-alanine ligasechromosome CDS2204555 861 - 0.470383
NA DP1856 related to coenzyme F390 synthetasechromosome CDS2089514 1305 - 0.526437
NA DP2991 probable molybdenum cofactor biosynthesis protein (MoaA)chromosome CDS3381836 1011 - 0.500495
NA DP0916 probable phosphomethylpyrimidine kinase (ThiD)chromosome CDS1027256 804 + 0.476368
NA DP2785 probable riboflavin biosynthesis protein (RibD)chromosome CDS3148367 1206 - 0.525705
NA DP1740 probable thiazole biosynthesis protein ThiHchromosome CDS1956680 1107 + 0.492322
NA DP2270 related to thiamine-monophosphate kinase (ThiL)chromosome CDS2604528 987 + 0.492401
NA DP3081 related to siroheme synthasechromosome CDS3480093 678 - 0.5059
NA DP2265 related to 6-pyruvoyl-tetrahydropterin synthasechromosome CDS2600872 243 - 0.436214
NA DP2327 conserved hypothetical proteinchromosome CDS2657645 963 - 0.558671
NA DP0545 probable aminotransferasechromosome CDS594208 1398 - 0.453505
NA DP0192 probable branched-chain amino acid aminotransferasechromosome CDS207547 1083 - 0.474608
NA DP2252 unknown proteinchromosome CDS2589296 699 - 0.359084
NA DP3016 related to dihydroorotate dehydrogenase, electron transfer subunitchromosome CDS3414329 789 - 0.513308
NA DP0541 probable aminotransferasechromosome CDS589776 1398 - 0.449928
NA DP1605 probable pyridoxal phosphate biosynthetic proteinchromosome CDS1788138 1182 - 0.535533
NA DP0632 probable glutamate synthase, beta subunitchromosome CDS690482 2226 + 0.52381
NA DP2392 probable ribosomal protein S6 modification protein (RimK)chromosome CDS2733468 1395 + 0.482437
NA DP0271 probable molybdopterin biosynthesis proteinchromosome CDS292800 1113 - 0.498652
NA DP3098 related to dihydropteroate synthasechromosome CDS3499810 831 + 0.524669