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2024-05-03 14:14:31

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 79

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_0590 5-formyltetrahydrofolate cyclo-ligasechromosome CDS577506 549 + 0.238616
NA SAR11_0275 probable dehydrogenasechromosome CDS277460 954 - 0.325996
NA SAR11_0360 Thiamine monophosphate synthasechromosome CDS353054 543 - 0.237569
NA SAR11_0833 Aminotransferasechromosome CDS803522 675 + 0.213333
NA SAR11_1261 Cytidylyltransferasechromosome CDS1199266 375 - 0.309333
NA SAR11_0729 ThiS familychromosome CDS710793 219 + 0.159817
NA SAR11_0844 Thiamine pyrophosphate-requiring enzymechromosome CDS812187 1785 + 0.365266
NA SAR11_0527 acetolactate synthase II large chainchromosome CDS519133 1737 - 0.278641
NA SAR11_0560 PCMT-protein-L-isoaspartate(D-aspartate)O-methyl transferasechromosome CDS553607 705 + 0.246809
NA SAR11_1197 Flavin Mononucleotide Binding Proteinchromosome CDS1147962 600 + 0.32
ahcY SAR11_0197 Adenosylhomocysteinasechromosome CDS197203 1287 - 0.344988
bioA SAR11_0808 Adenosylmethionine-8-amino-7-oxononanoateaminotr ansferasechromosome CDS783435 1347 + 0.351893
birA SAR11_0898 biotin-protein ligasechromosome CDS863300 564 + 0.212766
coaE SAR11_0340 Dephospho-CoA kinasechromosome CDS332688 570 - 0.191228
cobT SAR11_0448 Cobalamin biosynthesis protein CobTchromosome CDS444571 1809 - 0.283582
coq7 SAR11_0419 Coq7 family proteinchromosome CDS406848 534 - 0.282772
dfp SAR11_0405 phosphopantothenoylcysteine decarboxylasechromosome CDS393737 1206 - 0.284411
dxs SAR11_0611 1-D-deoxyxylulose 5-phosphate synthasechromosome CDS596553 1914 + 0.338036
folB SAR11_0083 dihydroneopterin aldolasechromosome CDS98097 426 + 0.223005
folC SAR11_0485 FolC bifunctional protein (Folylpolyglutamate synthase/Dihydrofolate synthase)chromosome CDS474189 1269 - 0.277384
folD SAR11_0307 methylenetetrahydrofolate dehydrogenasechromosome CDS303706 846 - 0.333333
folE SAR11_1245 GTP cyclohydrolase Ichromosome CDS1187347 609 - 0.318555
folK SAR11_1059 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)chromosome CDS1027659 522 - 0.239464
folP SAR11_0602 dihydropteroate synthase-like proteinchromosome CDS587974 1053 + 0.249763
gsh1 SAR11_0698 Glutamate-cysteine ligase family 2(GCS2)chromosome CDS681541 1296 - 0.286265
gshB SAR11_0697 glutathione synthasechromosome CDS680622 930 - 0.246237
hemB SAR11_1051 delta-aminolevulinic acid dehydratasechromosome CDS1021179 990 + 0.307071
hemC SAR11_0310 hydroxymethylbilane synthasechromosome CDS306635 924 - 0.287879
hemD SAR11_0309 Uroporphyrinogen III synthase HEM4chromosome CDS305935 699 - 0.273248
hemE SAR11_0344 uroporphyrinogen decarboxylasechromosome CDS335797 942 + 0.265393
hemF SAR11_0102 Coproporphyrinogen III oxidasechromosome CDS113571 828 + 0.293478
hemH SAR11_0346 probable ferrochelatasechromosome CDS336739 1035 + 0.31401
ilvB SAR11_0003 acetolactate synthase large subunit (ALS III)chromosome CDS2105 1767 - 0.335597
ilvC SAR11_0001 ketol-acid reductoisomerasechromosome CDS516 1014 - 0.352071
ilvE SAR11_0086 branched-chain amino acid aminotransferasechromosome CDS100928 882 - 0.329932
ispA SAR11_0610 geranyltranstransferasechromosome CDS595774 780 + 0.273077
ispB SAR11_0614 octaprenyl-diphosphate synthasechromosome CDS600214 1014 - 0.293886
kdtB SAR11_0986 pantetheine-phosphate adenylyltransferasechromosome CDS968955 495 + 0.232323
lipA SAR11_0941 lipoic acid synthasechromosome CDS926637 927 + 0.308522
metK SAR11_0387 methionine adenosyltransferasechromosome CDS377518 1170 + 0.337607
moaA SAR11_0763 molybdenum cofactor biosynthesis protein Achromosome CDS740065 993 - 0.288016
moaB SAR11_0754 molybdopterin biosynthesis proteinchromosome CDS734324 501 + 0.341317
moaC SAR11_0762 molybdopterin cofactor synthesis proteinchromosome CDS739519 546 - 0.29304
moaE SAR11_0760 molybdopterin biosynthesis protein E chainchromosome CDS738804 444 - 0.268018
mobA SAR11_0684 hypothetical proteinchromosome CDS668645 621 + 0.272142
moeA SAR11_0685 molybdopterin biosynthesis protein moeAchromosome CDS669258 1248 + 0.260417
moeB SAR11_0403 molybdopterin biosynthesis proteinchromosome CDS392541 756 - 0.248677
nadA SAR11_0620 Quinolinate synthetase A proteinchromosome CDS608585 990 - 0.337374
nadC SAR11_0619 Quinolinate phosphoribosyl transferasechromosome CDS607746 834 - 0.266187
nadE SAR11_1149 NH(3)-dependent NAD+ synthetase NadEchromosome CDS1103009 687 - 0.331878
nah SAR11_0110 salicylate 1-monooxygenasechromosome CDS121283 1152 - 0.265625
pabB SAR11_0831 para-aminobenzoate synthase component Ichromosome CDS801746 1164 + 0.230241
panB SAR11_0653 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS639028 774 + 0.286822
panC SAR11_1088 pantoate-beta-alanine ligasechromosome CDS1054401 843 + 0.221827
pdxA SAR11_0711 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS693358 963 - 0.239875
pdxH SAR11_0613 probable pyridoxamine-phosphate oxidasechromosome CDS599591 627 + 0.299841
pdxJ SAR11_1056 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS1024634 720 - 0.256944
phhB SAR11_0321 Putative pterin-4-alpha-carbinolamine dehydratasechromosome CDS319204 345 - 0.228986
pucI SAR11_0868 probable permease for cytosine/purineschromosome CDS837474 1458 + 0.26749
rfaL SAR11_1090 lipoate-protein ligase Bchromosome CDS1056675 621 + 0.256039
ribA SAR11_1044 GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS1015501 1101 - 0.260672
ribB SAR11_1045 riboflavin synthase alpha-chainchromosome CDS1016588 594 - 0.240741
ribD SAR11_1046 5-amino-6-(5-phosphoribosylamino)uracilreductasechromosome CDS1017186 1056 - 0.242424
ribF SAR11_0159 Riboflavin biosynthesis proteinchromosome CDS162399 918 - 0.236383
ribH SAR11_1043 riboflavin synthasechromosome CDS1015115 387 - 0.294574
serA SAR11_1366 phosphoglycerate dehydrogenasechromosome CDS1298690 951 - 0.318612
thiD SAR11_0604 phosphomethylpyrimidine kinasechromosome CDS590359 813 + 0.293973
thiE SAR11_0583 thiamine-phosphate pyrophosphorylasechromosome CDS570922 624 - 0.240385
thiG SAR11_0730 Thiazole biosynthesis proteinchromosome CDS711014 774 + 0.332041
thiL SAR11_1041 thiamine-phosphate kinasechromosome CDS1013756 960 - 0.233333
tktC SAR11_0536 transketolase familychromosome CDS529658 930 - 0.253763
trpE SAR11_0925 anthranilate synthase component I-like proteinchromosome CDS889476 1455 - 0.272852
trpG SAR11_0832 Anthranilate synthase component II (Glutamine amido-transferase)chromosome CDS802906 558 + 0.250896
trpGD SAR11_0924 anthranilate synthase component IIchromosome CDS888901 576 - 0.256944
ubiA SAR11_0145 4-hydroxybenzoate octaprenyltransferasechromosome CDS149911 864 + 0.269676
ubiE SAR11_0407 Ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS396519 705 - 0.280851
ubiG SAR11_0515 probable 3-demethylubiquinone-9 3-O-methyltransferase RP622chromosome CDS504209 723 - 0.250346
ubiH SAR11_0323 Putative ubiquinone biosynthesis monooxgenase COQ6chromosome CDS320387 1134 - 0.207231
ybeN SAR11_0225 probable nicotinate-nucleotide adenylyltransferasechromosome CDS224851 543 + 0.235727