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2024-04-29 03:33:34

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Colwellia psychrerythraea 34H, 34H; BAA-681

Number of genes found: 151

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Colwellia psychrerythraea 34H, 34H; BAA-681
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CPS_3257 monooxygenase family proteinchromosome CDS3388666 1398 + 0.458512
NA CPS_3360 putative acetolactate synthase, catabolicchromosome CDS3487287 1659 - 0.410488
NA CPS_1143 putative cobalamin biosynthesis protein Dchromosome CDS1165886 1035 - 0.405797
NA CPS_4049 radical SAM domain proteinchromosome CDS4258459 1179 - 0.471586
NA CPS_1166 putative vitamin B12 transport ATP-binding protein BtuDchromosome CDS1188680 831 - 0.383875
NA CPS_4374 protein of unknown functionchromosome CDS4607758 498 + 0.411647
NA CPS_0543 putative methylasechromosome CDS541451 822 - 0.407543
NA CPS_0125 putative chorismate--pyruvate lyasechromosome CDS130014 576 + 0.420139
NA CPS_3411 putative phenylacetate-coenzyme A ligasechromosome CDS3539952 1251 - 0.403677
NA CPS_0178 oxidoreductase, NAD-bindingchromosome CDS187630 720 + 0.380556
NA CPS_3668 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS3811057 1167 + 0.377892
NA CPS_0715 conserved domain proteinchromosome CDS717135 93 - 0.365591
NA CPS_4059 omega-amino acid--pyruvate aminotransferasechromosome CDS4270248 1344 + 0.47247
NA CPS_3698 TonB-dependent receptorchromosome CDS3845353 2886 + 0.404019
NA CPS_4233 UbiA prenyltransferase family proteinchromosome CDS4457928 864 + 0.37963
NA CPS_2787 apbE family proteinchromosome CDS2908627 918 - 0.399782
NA CPS_0257 conserved hypothetical proteinchromosome CDS261457 708 + 0.388418
NA CPS_5015 putative polysaccharide biosynthesis proteinchromosome CDS5330392 1341 + 0.35645
NA CPS_0099 omega-amino acid--pyruvate aminotransferasechromosome CDS106294 1338 - 0.470105
NA CPS_2595 putative 7-keto-8-aminopelargonic acid synthetasechromosome CDS2698524 1149 + 0.369017
NA CPS_4048 conserved hypothetical protein TIGR00423chromosome CDS4257158 1290 - 0.446512
NA CPS_1273 monooxygenase family proteinchromosome CDS1306849 1329 + 0.425884
NA CPS_2054 aminotransferase, class IIIchromosome CDS2133123 1404 - 0.388177
NA CPS_1338 putativeglutamate-1-semialdehyde-2,1-aminomutasechromosome CDS1375435 1323 + 0.41421
NA CPS_2068 conserved hypothetical proteinchromosome CDS2146653 549 - 0.393443
NA CPS_2082 putative glyoxylate reductasechromosome CDS2163899 936 - 0.415598
NA CPS_4663 aminotransferase, class IIIchromosome CDS4927162 1356 - 0.393805
NA CPS_2212 thiF family proteinchromosome CDS2313154 819 - 0.394383
NA CPS_2614 conserved hypothetical proteinchromosome CDS2716784 891 + 0.382716
NA CPS_0065 putative nicotinamide mononucleotide transporter PnuCchromosome CDS64541 654 - 0.374618
NA CPS_4634 putative molybdopterin biosynthesis genechromosome CDS4896275 657 + 0.400304
NA CPS_2329 3-demethylubiquinone-9 3-methyltransferase, truncatedchromosome CDS2425264 213 - 0.338028
NA CPS_3593 putativeglutamate-1-semialdehyde-2,1-aminomutasechromosome CDS3729691 1311 + 0.403509
NA CPS_4056 transporter, NCS1 nucleoside familychromosome CDS4267261 1548 - 0.466408
NA CPS_3049 conserved hypothetical proteinchromosome CDS3185962 705 - 0.402837
NA CPS_0538 protein of unknown functionchromosome CDS537356 492 - 0.392276
NA CPS_3659 putativenicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS3802875 1179 - 0.386768
NA CPS_1824 putative GTP cyclohydrolase IIchromosome CDS1873746 615 + 0.330081
NA CPS_2926 putative cobalamin biosynthesis proteinchromosome CDS3061081 723 + 0.329184
NA CPS_3582 monooxygenase family proteinchromosome CDS3718791 1392 + 0.380747
NA CPS_2933 putative 6-pyruvoyl tetrahydropterin synthasechromosome CDS3066090 363 + 0.349862
NA CPS_4742 cobD/cbiB family proteinchromosome CDS5020994 966 - 0.395445
NA CPS_2025 aminotransferase, class IIIchromosome CDS2097533 1353 + 0.392461
NA CPS_3106 4-phosphopantetheinyl transferasechromosome CDS3250526 849 + 0.382803
NA CPS_0239 putative tryptophan halogenasechromosome CDS244777 1614 + 0.400867
NA CPS_0688 thiamine pyrophosphate-binding domain proteinchromosome CDS692301 1761 + 0.396366
NA CPS_4284 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS4515389 954 + 0.381551
NA CPS_0537 siroheme synthase, N-terminal componentchromosome CDS536253 966 - 0.390269
NA CPS_3648 5-formyltetrahydrofolate cyclo-ligase family proteinchromosome CDS3793385 579 + 0.421416
apbE CPS_1086 thiamin biosynthesis lipoprotein ApbEchromosome CDS1106014 1032 + 0.401163
bioA CPS_2593 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferasechromosome CDS2695775 1341 - 0.40343
bioB CPS_2594 biotin synthasechromosome CDS2697203 1104 + 0.387681
bioD CPS_2597 dethiobiotin synthasechromosome CDS2700653 792 + 0.369949
birA CPS_4745 birA bifunctional proteinchromosome CDS5023570 1002 - 0.40519
btuB CPS_1162 tonB-dependent vitamin B12 receptorchromosome CDS1183704 1869 - 0.390048
coaBC CPS_0182 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligasechromosome CDS192296 1212 - 0.424917
coaD CPS_0213 pantetheine-phosphate adenylyltransferasechromosome CDS220263 471 - 0.401274
coaE CPS_4450 dephospho-CoA kinasechromosome CDS4688234 609 + 0.36289
cobA1 CPS_1126 uroporphyrin-III C-methyltransferasechromosome CDS1149302 792 - 0.429293
cobA2 CPS_4228 uroporphyrin-III C-methyltransferasechromosome CDS4452038 879 + 0.400455
cobB CPS_1147 cobyrinic acid a,c-diamide synthasechromosome CDS1169061 1335 + 0.426217
cobO1 CPS_1148 cob(I)alamin adenosyltransferasechromosome CDS1170819 648 + 0.388889
cobO2 CPS_1164 cob(I)alamin adenosyltransferasechromosome CDS1187027 618 - 0.393204
cobP CPS_3657 bifunctional cobalamin biosynthesis protein CobPchromosome CDS3801434 561 - 0.406417
cobQ CPS_3655 cobyric acid synthase CobQchromosome CDS3798983 1611 - 0.42334
cobS CPS_3658 cobalamin 5'-phosphate synthasechromosome CDS3801991 888 - 0.376126
cysD CPS_2142 sulfate adenylate transferase, subunit 2chromosome CDS2242468 900 + 0.405556
cysH CPS_4761 phosophoadenylyl-sulfate reductasechromosome CDS5038050 762 + 0.41601
dxs CPS_1088 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS1107564 1893 - 0.393027
folA CPS_4505 dihydrofolate reductasechromosome CDS4752998 513 - 0.387914
folB CPS_4340 dihydroneopterin aldolasechromosome CDS4574057 372 + 0.424731
folC CPS_3801 folC bifunctional proteinchromosome CDS3962813 1314 - 0.374429
folD1 CPS_3133 FolD bifunctional proteinchromosome CDS3268180 849 + 0.400471
folD2 CPS_3791 FolD bifunctional proteinchromosome CDS3953842 855 + 0.392982
folE1 CPS_2469 GTP cyclohydrolase Ichromosome CDS2584611 546 - 0.358974
folE2 CPS_2678 GTP cyclohydrolase Ichromosome CDS2788683 543 - 0.388582
folE3 CPS_2930 GTP cyclohydrolase Ichromosome CDS3064197 549 - 0.371585
folK1 CPS_2675 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS2787192 393 - 0.366412
folK2 CPS_4311 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS4539304 501 + 0.399202
folK3 CPS_4341 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS4574428 498 + 0.391566
folP CPS_3451 dihydropteroate synthasechromosome CDS3585418 861 - 0.397213
folX CPS_2676 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS2787584 351 - 0.37037
gshA CPS_4078 glutamate--cysteine ligasechromosome CDS4288123 1590 - 0.381132
gshB CPS_1253 glutathione synthetasechromosome CDS1283691 963 - 0.389408
hemA CPS_3554 glutamyl-tRNA reductasechromosome CDS3692178 1269 - 0.388495
hemB CPS_0169 delta-aminolevulinic acid dehydratasechromosome CDS178463 1047 + 0.424069
hemC CPS_0074 porphobilinogen deaminasechromosome CDS77468 954 - 0.420335
hemD CPS_0073 uroporphyrinogen-III synthasechromosome CDS76642 762 - 0.401575
hemE CPS_0448 uroporphyrinogen decarboxylasechromosome CDS445407 1068 + 0.390449
hemF CPS_3996 coproporphyrinogen III oxidase, aerobicchromosome CDS4196515 939 + 0.42492
hemH CPS_1039 ferrochelatasechromosome CDS1066060 1065 + 0.389671
hemL CPS_4629 glutamate-1-semialdehyde-2,1-aminomutasechromosome CDS4891539 1284 + 0.411215
hemN CPS_4823 oxygen-independent coproporphyrinogen III oxidasechromosome CDS5115418 1371 - 0.351568
hemX CPS_0072 putative uroporphyrin-III C-methyltransferasechromosome CDS75200 1419 - 0.410853
hemY CPS_0071 hemY proteinchromosome CDS73992 1212 - 0.384488
ilvC CPS_4839 ketol-acid reductoisomerasechromosome CDS5129718 1482 - 0.394737
ilvE CPS_4845 branched-chain amino acid aminotransferasechromosome CDS5136475 927 + 0.406688
ilvG CPS_4843 acetolactate synthase II, large subunit, biosynthetic typechromosome CDS5134507 1566 + 0.421456
ilvI CPS_3236 acetolactate synthase III, large subunit, biosynthetic typechromosome CDS3364002 1728 + 0.402778
ispA CPS_1089 geranyltranstransferasechromosome CDS1109511 903 - 0.40753
ispB CPS_4513 octaprenyl-diphosphate synthasechromosome CDS4760378 984 + 0.398374
kbl CPS_0120 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS125702 1209 + 0.415219
lipA CPS_1709 lipoic acid synthetasechromosome CDS1757175 987 - 0.405268
lipB CPS_1710 lipoate-protein ligase Bchromosome CDS1758154 708 - 0.392655
metK CPS_1256 S-adenosylmethionine synthetasechromosome CDS1286654 1188 - 0.399832
moaA CPS_4633 molybdenum cofactor biosynthesis protein Achromosome CDS4895301 972 + 0.407407
moaB CPS_4635 molybdenum cofactor biosynthesis protein Bchromosome CDS4897039 543 + 0.423573
moaC CPS_4636 molybdenum cofactor biosynthesis protein Cchromosome CDS4897581 528 + 0.412879
moaD CPS_4637 molybdopterin converting factor, subunit 1chromosome CDS4898124 249 + 0.39759
moaE CPS_4638 molybdopterin converting factor, subunit 2chromosome CDS4898376 471 + 0.384289
moeA CPS_4632 molybdopterin biosynthesis moeA proteinchromosome CDS4893632 1233 - 0.414436
nadA CPS_1740 quinolinate synthetase complex, subunit Achromosome CDS1784318 1059 + 0.421152
nadB CPS_4130 L-aspartate oxidasechromosome CDS4345267 1599 + 0.406504
nadC CPS_4813 nicotinate-nucleotide pyrophosphorylasechromosome CDS5104959 897 + 0.419175
nadD CPS_1718 nicotinate-nucleotide adenylyltransferasechromosome CDS1765909 693 - 0.356421
nadE CPS_3918 NAD+ synthetasechromosome CDS4092666 846 + 0.394799
pabA CPS_0638 anthranilate synthase component IIchromosome CDS636703 600 - 0.361667
pabB CPS_3614 para-aminobenzoate synthase, component Ichromosome CDS3750564 1494 + 0.405622
pabC CPS_2300 4-amino-4-deoxychorismate lyasechromosome CDS2399796 807 + 0.3829
panB CPS_4312 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS4539887 795 + 0.420126
panC CPS_4313 pantoate--beta-alanine ligasechromosome CDS4540792 867 + 0.402537
panE CPS_1095 2-dehydropantoate 2-reductasechromosome CDS1114738 939 - 0.386581
pdxA CPS_4525 pyridoxal phosphate biosynthetic protein PdxAchromosome CDS4778423 981 + 0.410805
pdxB CPS_3806 erythronate-4-phosphate dehydrogenasechromosome CDS3971294 1182 - 0.386633
pdxH CPS_1053 pyridoxamine 5'-phosphate oxidasechromosome CDS1078913 654 - 0.394495
pdxJ CPS_4119 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS4335517 741 - 0.384615
phhB CPS_3765 pterin-4-alpha-carbinolamine dehydratasechromosome CDS3930744 354 - 0.375706
pqqC CPS_0859 coenzyme PQQ synthesis protein Cchromosome CDS875002 756 - 0.412698
ribA CPS_4061 GTP cyclohydrolase IIchromosome CDS4273464 609 + 0.380952
ribB CPS_0732 3,4-dihydroxy-2-butanone-4-phosphate synthasechromosome CDS733549 1110 + 0.398198
ribD CPS_0730 riboflavin biosynthesis protein RibDchromosome CDS731492 1170 + 0.410256
ribE1 CPS_0731 riboflavin synthase, alpha subunitchromosome CDS732709 699 + 0.402003
ribE2 CPS_1531 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS1573322 465 + 0.387097
ribF CPS_1181 riboflavin biosynthesis protein RibFchromosome CDS1207417 921 + 0.383279
serA CPS_1544 D-3-phosphoglycerate dehydrogenasechromosome CDS1587647 1254 - 0.378788
serC CPS_2332 phosphoserine aminotransferasechromosome CDS2430176 1086 + 0.379374
thiC CPS_0250 thiamine biosynthesis protein ThiCchromosome CDS253519 1977 + 0.406171
thiDE CPS_0254 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylasechromosome CDS258003 1590 + 0.410692
thiF CPS_4642 adenylyltransferase ThiFchromosome CDS4901592 750 + 0.406667
thiG CPS_0253 thiazole biosynthesis protein ThiGchromosome CDS256905 798 + 0.428571
thiL CPS_1533 thiamine-monophosphate kinasechromosome CDS1574273 963 + 0.396677
thiS CPS_0252 thiamine biosynthesis protein ThiSchromosome CDS256693 213 + 0.375587
trpE CPS_3522 anthranilate synthase component Ichromosome CDS3661146 1644 + 0.378954
trpG CPS_3523 glutamine amido-transferasechromosome CDS3662782 630 + 0.38254
ubiA CPS_0126 4-hydroxybenzoate polyprenyl transferasechromosome CDS130627 864 + 0.40162
ubiD CPS_0177 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS185928 1494 + 0.400268
ubiE CPS_0294 ubiquinone/menaquinone biosynthesis methlytransferase UbiEchromosome CDS304056 816 + 0.381127
ubiF CPS_3568 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinolh ydroxylasechromosome CDS3700906 1206 - 0.421227
ubiG CPS_2330 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2426293 741 - 0.380567
ubiH CPS_1272 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS1305439 1314 + 0.414764
ubiX CPS_0408 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS414724 621 + 0.409018