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2024-05-06 02:03:54

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Staphylococcus epidermidis RP62A phage SP-beta

Number of genes found: 102

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Staphylococcus epidermidis RP62A phage SP-beta
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SERP1858 molybdopterin biosynthesis MoeB protein, putativechromosome CDS1885116 1002 - 0.341317
NA SERP2394 aminotransferase, class IIchromosome CDS2450579 1134 - 0.315697
NA SERP0616 lipoate-protein ligase A family proteinchromosome CDS610614 987 + 0.299899
NA SERP2074 HesA/MoeB/ThiF family proteinchromosome CDS2099079 999 + 0.358358
NA SERP1399 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1463472 951 - 0.279706
NA SERP2382 ApbE family proteinchromosome CDS2431209 918 - 0.339869
NA SERP2087 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2114267 993 + 0.344411
NA SERP0372 6-pyruvoyl tetrahydrobiopterin synthase, putativechromosome CDS369651 420 - 0.328571
NA SERP2115 pyruvate oxidasechromosome CDS2139898 1740 - 0.344253
NA SERP1160 conserved hypothetical protein TIGR00488chromosome CDS1197416 585 - 0.333333
NA SERP2073 thiG protein, putativechromosome CDS2098310 768 + 0.369792
NA SERP0237 lipoate-protein ligase A family proteinchromosome CDS243586 840 + 0.35119
NA SERP2153 2-dehydropantoate 2-reductase PanE, putativechromosome CDS2179573 870 + 0.328736
NA SERP2189 uroporphyrin-III C-methyltransferase, putativechromosome CDS2221883 780 - 0.384615
NA SERP1097 lipoate-protein ligase A family proteinchromosome CDS1140565 831 - 0.32852
NA SERP2133 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2158591 999 - 0.337337
NA SERP1039 methlytransferase, UbiE/COQ5 familychromosome CDS1084763 726 - 0.349862
NA SERP1572 conserved hypothetical proteinchromosome CDS1607174 264 - 0.363636
NA SERP0629 isochorismate synthase family proteinchromosome CDS619533 1371 + 0.326039
NA SERP1151 oxygen-independent coproporphyrinogen III oxidase, putativechromosome CDS1188099 1125 - 0.317333
NA SERP0158 pyridoxine biosynthesis proteinchromosome CDS162243 888 + 0.396396
NA SERP1115 5-formyltetrahydrofolate cyclo-ligase family proteinchromosome CDS1154793 552 - 0.324275
NA SERP0306 iron compound ABC transporter, ATP-binding proteinchromosome CDS309129 798 + 0.349624
NA SERP0789 conserved hypothetical proteinchromosome CDS789157 636 + 0.322327
NA SERP0516 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS501635 972 + 0.356996
NA SERP1038 polyprenyl synthetasechromosome CDS1083802 960 - 0.33125
NA SERP1888 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1910736 954 + 0.342767
NA SERP1855 molybdopterin biosynthesis MoeA protein, putativechromosome CDS1882695 1260 - 0.354762
NA SERP1889 monooxygenase family proteinchromosome CDS1911830 1125 - 0.341333
NA SERP1191 HesA/MoeB/ThiF family proteinchromosome CDS1226766 777 - 0.338481
NA SERP1450 nicotinate phosphoribosyltransferase, putativechromosome CDS1514621 1443 - 0.33957
NA SERP0159 conserved hypothetical proteinchromosome CDS163130 561 + 0.326203
NA SERP2022 2-dehydropantoate 2-reductase PanE, putativechromosome CDS2041194 933 - 0.341908
NA SERP1988 uroporphyrinogen-III methylase SirB, putativechromosome CDS2007820 936 - 0.34188
NA SERP1737 conserved hypothetical proteinchromosome CDS1776659 798 + 0.340852
NA SERP2070 thiamine-phosphate pyrophosphorylase, putativechromosome CDS2096555 459 + 0.328976
NA SERP2337 4-phosphopantetheinyl transferase family proteinchromosome CDS2375760 624 - 0.315705
NA SERP2188 siroheme synthase, putativechromosome CDS2221197 612 - 0.323529
bioA SERP2395 adenosylmethionine--8-amino-7-oxononanoateaminot ransferasechromosome CDS2451723 1356 - 0.340708
bioB SERP2347 biotin synthetasechromosome CDS2392998 966 - 0.34472
bioD SERP2396 dethiobiotin synthasechromosome CDS2453071 672 - 0.348214
bioW SERP2393 6-carboxyhexanoate--CoA ligasechromosome CDS2449900 687 - 0.317322
birA SERP1026 birA bifunctional proteinchromosome CDS1072181 972 - 0.307613
budB SERP2155 acetolactate synthase, catabolicchromosome CDS2181657 1665 - 0.353754
coaBC SERP0778 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligasechromosome CDS776624 1200 + 0.346667
coaD SERP0715 pantetheine-phosphate adenylyltransferasechromosome CDS710235 486 + 0.337449
coaE SERP1252 dephospho-CoA kinasechromosome CDS1289032 612 - 0.331699
cysH SERP2192 phosophoadenylyl-sulfate reductasechromosome CDS2226564 732 - 0.329235
dat SERP1309 D-alanine aminotransferasechromosome CDS1358349 849 - 0.326266
folA-1 SERP1002 dihydrofolate reductasechromosome CDS1016993 486 - 0.358025
folA-2 SERP1581 dihydrofolate reductasechromosome CDS1610764 486 - 0.355967
folB SERP0154 dihydroneopterin aldolasechromosome CDS146271 366 + 0.338798
folC SERP1227 folylpolyglutamate synthase/dihydrofolate synthasechromosome CDS1259963 1266 - 0.313586
folD SERP0648 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolasechromosome CDS643140 861 - 0.32288
folK SERP0155 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS146637 480 + 0.327083
folP SERP0153 dihydropteroate synthasechromosome CDS145475 819 + 0.376068
hemA SERP1236 glutamyl-tRNA reductasechromosome CDS1271095 1347 - 0.328879
hemB SERP1232 delta-aminolevulinic acid dehydratasechromosome CDS1267603 975 - 0.339487
hemC SERP1234 porphobilinogen deaminasechromosome CDS1269281 927 - 0.337648
hemD SERP1233 uroporphyrinogen-III synthasechromosome CDS1268567 681 - 0.306902
hemE SERP1368 uroporphyrinogen decarboxylasechromosome CDS1425049 1035 - 0.350725
hemG SERP1366 protoporphyrinogen oxidasechromosome CDS1422508 1449 - 0.336784
hemH SERP1367 ferrochelatasechromosome CDS1424049 924 - 0.341991
hemL-1 SERP1231 glutamate-1-semialdehyde-2,1-aminomutasechromosome CDS1266296 1284 - 0.355919
hemL-2 SERP1401 glutamate-1-semialdehyde-2,1-aminomutasechromosome CDS1464964 1290 + 0.373643
ilvB SERP1666 acetolactate synthase, large subunit, biosynthetic typechromosome CDS1704708 1704 + 0.356808
ilvC SERP1668 ketol-acid reductoisomerasechromosome CDS1706761 1005 + 0.355224
ilvE SERP0195 branched-chain amino acid aminotransferasechromosome CDS204021 1077 + 0.357474
ipdC SERP2242 indole-3-pyruvate decarboxylasechromosome CDS2269462 1650 + 0.347273
ispA SERP1082 geranyltranstransferasechromosome CDS1128347 882 - 0.295918
lipA SERP0511 lipoate synthasechromosome CDS498445 915 + 0.356284
menA SERP0627 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS618425 939 - 0.355698
menB SERP0632 naphthoate synthasechromosome CDS623346 819 + 0.376068
menD SERP0630 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylasechromosome CDS620890 1674 + 0.343489
metK SERP1352 S-adenosylmethionine synthetasechromosome CDS1408320 1200 - 0.360833
moaA SERP1850 molybdenum cofactor biosynthesis protein Achromosome CDS1879893 1023 - 0.308895
moaB SERP1857 molybdenum cofactor biosynthesis protein Bchromosome CDS1884565 531 - 0.33145
moaC SERP1856 molybdenum cofactor biosynthesis protein Cchromosome CDS1884016 489 + 0.323108
moaD SERP1852 molybdopterin converting factor, subunit 1chromosome CDS1881539 234 - 0.32906
moaE SERP1853 molybdenum cofactor biosynthesis protein Echromosome CDS1881769 453 - 0.368653
mobA SERP1851 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS1880928 615 - 0.292683
mobB SERP1854 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS1882222 477 - 0.324948
nadD SERP1161 nicotinate (nicotinamide) nucleotide adenylyltransferasechromosome CDS1197987 576 - 0.305556
nadE SERP1449 NH(3)-dependent NAD+ synthetasechromosome CDS1513801 828 - 0.342995
pabA SERP0374 para-aminobenzoate synthase, glutamine amidotransferase, component IIchromosome CDS371043 588 + 0.341837
panB SERP2152 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS2178679 819 - 0.360195
panC SERP2151 pantoate--beta-alanine ligasechromosome CDS2177826 861 - 0.343786
panD SERP2150 aspartate 1-decarboxylasechromosome CDS2177447 387 - 0.307494
ribBA SERP1326 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase IIchromosome CDS1386910 1182 - 0.349408
ribD SERP1328 riboflavin biosynthesis protein RibDchromosome CDS1388743 1044 - 0.33908
ribE SERP1327 riboflavin synthase, alpha subunitchromosome CDS1388104 633 - 0.331754
ribF SERP0839 riboflavin biosynthesis protein RibFchromosome CDS846712 972 + 0.340535
ribH SERP1325 riboflavin synthase, beta subunitchromosome CDS1386436 462 - 0.339827
serA SERP1288 D-3-phosphoglycerate dehydrogenasechromosome CDS1331773 1596 + 0.344612
thiD-1 SERP0226 phosphomethylpyrimidine kinasechromosome CDS234682 834 - 0.366906
thiD-2 SERP1700 phosphomethylpyrimidine kinasechromosome CDS1742502 822 - 0.347932
thiE SERP1698 thiamine-phosphate pyrophosphorylasechromosome CDS1741077 642 - 0.325545
thiI SERP1279 thiamine biosynthesis protein ThiIchromosome CDS1323145 1224 - 0.321078
thiM SERP1699 hydroxyethylthiazole kinasechromosome CDS1741721 789 - 0.342205
thiS SERP2072 thiamine biosynthesis protein ThiSchromosome CDS2098108 201 + 0.343284
trpE SERP0937 anthranilate synthase component Ichromosome CDS954084 1407 + 0.295665
trpG SERP0938 anthranilate synthase component IIchromosome CDS955487 567 + 0.305115