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2024-05-07 20:51:59

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043

Number of genes found: 162

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Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECA3632 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS4080027 1140 + 0.568421
NA ECA3553 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3984884 417 + 0.501199
NA ECA2257 dethiobiotin synthetasechromosome CDS2556274 666 - 0.525526
NA ECA2876 putative phage-related proteinchromosome CDS3220532 840 + 0.411905
NA ECA4066 para-aminobenzoate synthase, glutamine amidotransferase component IIchromosome CDS4531245 576 - 0.510417
NA ECA3243 putative ferric-enterobactin ABC transporter ATP-binding proteinchromosome CDS3626100 801 + 0.548065
NA ECA3009 putative coproporphyrinogen oxidasechromosome CDS3361374 1314 - 0.556317
NA ECA1426 putative thiamine pyrophosphate enzymechromosome CDS1618722 1797 + 0.469672
NA ECA0112 conserved hypothetical proteinchromosome CDS131919 1287 + 0.574981
NA ECA4463 putative membrane proteinchromosome CDS5008470 744 + 0.522849
NA ECA4254 putative iron(III) ABC transporter ATP-binding proteinchromosome CDS4767603 798 + 0.572682
NA ECA3947 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS4418704 927 - 0.539374
NA ECA0557 putative exported proteinchromosome CDS624609 522 + 0.5
NA ECA2981 putative exported proteinchromosome CDS3330105 2058 + 0.506803
NA ECA0462 putative 5-formyltetrahydrofolate cyclo-ligasechromosome CDS526894 627 + 0.550239
NA ECA1923 riboflavin synthase alpha chainchromosome CDS2181519 636 + 0.509434
NA ECA3094 ABC transporter ATP-binding proteinchromosome CDS3454008 771 - 0.546044
NA ECA2971 putative branched-chain amino acid aminotransferasechromosome CDS3321890 918 + 0.550109
NA ECA1070 putative 3-polyprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS1199330 1425 + 0.506667
NA ECA1970 putative thiamine biosynthesis proteinchromosome CDS2237016 972 + 0.476337
NA ECA2628 conserved phage proteinchromosome CDS2961047 1029 - 0.495627
NA ECA3760 PdxA-like proteinchromosome CDS4199670 981 - 0.552497
NA ECA1010 conserved hypothetical proteinchromosome CDS1134065 819 + 0.542125
NA ECA0522 conserved hypothetical proteinchromosome CDS596187 615 + 0.458537
NA ECA2357 putative kinasechromosome CDS2668763 534 + 0.417603
NA ECA1579 probable ketopantoate reductasechromosome CDS1834370 891 + 0.563412
NA ECA0869 conserved hypothetical proteinchromosome CDS962609 858 + 0.522144
KdtB ECA0150 phosphopantetheine adenylyltransferasechromosome CDS170375 480 - 0.49375
apbE ECA1854 thiamine biosynthesis lipoproteinchromosome CDS2105019 1047 - 0.520535
bioA ECA2826 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferasechromosome CDS3166195 1305 + 0.549425
bioB ECA2825 biotin synthasechromosome CDS3165062 1038 - 0.531792
bioD ECA2822 dethiobiotin synthetasechromosome CDS3162450 681 - 0.544787
bioF ECA2824 8-amino-7-oxononanoate synthasechromosome CDS3163865 1158 - 0.585492
birA ECA0214 bira bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-CoA-carboxylase] synthetase]chromosome CDS247002 960 + 0.425
btuB ECA4238 vitamin B12 receptor precursorchromosome CDS4748153 1848 - 0.474026
btuC ECA1832 vitamin B12 transport system permeasechromosome CDS2078193 996 + 0.549197
btuD ECA1834 vitamin B12 transport ATP-binding proteinchromosome CDS2079817 753 + 0.594954
btuR ECA2290 cob(I)alamin adenosyltransferasechromosome CDS2595969 591 + 0.526227
budB ECA0741 putative acetolactate synthase, catabolicchromosome CDS809514 1680 + 0.541071
cbrD ECA2806 achromobactin transport ATP-binding proteinchromosome CDS3147401 840 - 0.552381
citG ECA2569 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasechromosome CDS2899810 906 - 0.562914
citX ECA2570 apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS2900693 528 - 0.570076
coaA ECA0215 pantothenate kinasechromosome CDS247989 951 - 0.398528
coaE ECA3802 dephospho-CoA kinasechromosome CDS4250722 627 + 0.5311
cysD ECA3543 sulfate adenylyltransferase subunit 2chromosome CDS3969465 909 - 0.544554
cysG1 ECA3544 siroheme synthase [includes: uroporphyrin-III C-methyltransferase; precorrin-2 oxidase; ferrochelatase]chromosome CDS3970383 1443 - 0.5842
cysG2 ECA4081 siroheme synthase [includes: uroporphyrin-III C-methyltransferase; precorrin-2 oxidase; ferrochelatase]chromosome CDS4549962 1380 + 0.546377
cysH ECA3545 phosphoadenosine phosphosulfate reductasechromosome CDS3972135 735 - 0.559184
dat ECA3117 D-alanine aminotransferasechromosome CDS3479267 861 + 0.505226
dfp ECA0144 DNA/pantothenate metabolism flavoproteinchromosome CDS165547 1278 - 0.545383
dhpS ECA0699 dihydropteroate synthasechromosome CDS770241 834 + 0.521583
dxs ECA1131 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS1282733 1866 - 0.530547
ehpC ECA2701 putative phenazine antibiotic biosynthesis proteinchromosome CDS3036349 1878 - 0.492545
ehpE ECA2698 putative phenazine antibiotic biosynthesis proteinchromosome CDS3034530 639 - 0.525822
entC ECA0477 enterobactin synthetase component C (isochorismate synthase)chromosome CDS543754 1197 + 0.535505
fecE ECA1073 iron(III) dicitrate transport ATP-binding proteinchromosome CDS1201900 768 - 0.561198
fhuC ECA3312 ferrichrome transport ATP-binding proteinchromosome CDS3721339 798 - 0.571429
folA ECA3864 dihydrofolate reductasechromosome CDS4323391 483 - 0.534162
folB ECA3590 dihydroneopterin aldolasechromosome CDS4036671 357 - 0.521008
folC ECA3055 bifunctional protein [includes: folylpolyglutamate synthase and dihydrofolate synthase]chromosome CDS3411257 1269 - 0.550827
folD ECA3149 bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase]chromosome CDS3516455 864 + 0.530093
folE ECA2711 GTP cyclohydrolase Ichromosome CDS3045672 663 - 0.505279
folK ECA3320 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS3732230 498 + 0.556225
folX ECA3045 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS3402596 372 + 0.456989
fre ECA0206 NAD(P)H-flavin reductasechromosome CDS231891 702 + 0.507123
gshA ECA3363 glutamate--cysteine ligasechromosome CDS3777940 1554 - 0.501287
gshB ECA3924 glutathione synthetasechromosome CDS4392301 960 + 0.5375
hemA ECA2189 glutamyl-tRNA reductasechromosome CDS2491599 1257 + 0.536993
hemB ECA0203 delta-aminolevulinic acid dehydratasechromosome CDS228573 1023 + 0.528837
hemC ECA4188 porphobilinogen deaminasechromosome CDS4680620 942 + 0.564756
hemD ECA4189 uroporphyrinogen-III synthasechromosome CDS4681558 741 + 0.54386
hemE ECA0235 uroporphyrinogen decarboxylasechromosome CDS275283 1065 + 0.532394
hemF ECA0874 coproporphyrinogen III oxidase, aerobicchromosome CDS969369 933 - 0.550911
hemG ECA0212 protoporphyrinogen oxidasechromosome CDS239695 540 + 0.47963
hemH ECA1181 ferrochelatasechromosome CDS1336525 963 + 0.550363
hemL ECA3307 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS3714803 1281 + 0.571429
hemN ECA0026 oxygen-independent coproporphyrinogen III oxidasechromosome CDS30749 1374 + 0.502183
hemX ECA4190 putative uroporphyrin-III C-methyltransferasechromosome CDS4682322 1125 + 0.553778
hemY ECA4191 porphyrin biosynthetic proteinchromosome CDS4683449 1194 + 0.551089
hprA ECA2721 glycerate dehydrogenasechromosome CDS3057901 990 - 0.513131
ilvB ECA3848 acetolactate synthase isozyme I large subunitchromosome CDS4302196 1665 + 0.566967
ilvC ECA4221 ketol-acid reductoisomerasechromosome CDS4722380 1479 - 0.532792
ilvE ECA4227 branched-chain amino acid aminotransferasechromosome CDS4730043 927 - 0.539374
ilvG ECA4229 acetolactate synthase isozyme II large subunitchromosome CDS4731332 1647 - 0.546448
ilvI ECA3829 acetolactate synthase isozyme III large subunitchromosome CDS4277864 1719 - 0.536358
ipdC ECA3605 indole-3-pyruvate decarboxylasechromosome CDS4054763 1668 + 0.543765
ispA ECA1132 geranyltranstransferasechromosome CDS1284617 912 - 0.542763
ispB ECA0689 octaprenyl-diphosphate synthasechromosome CDS760380 972 - 0.504115
kbl ECA0167 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS186786 1197 + 0.544695
ldhA ECA2000 D-lactate dehydrogenasechromosome CDS2266640 993 - 0.531722
lipA ECA1297 lipoic acid synthetasechromosome CDS1469462 966 - 0.541408
lipB ECA1298 lipoate-protein ligase Bchromosome CDS1470655 684 - 0.535088
menA ECA4263 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4777900 918 + 0.533769
menB ECA1213 naphthoate synthasechromosome CDS1381835 858 + 0.545455
menC ECA1214 O-succinylbenzoate-CoA synthasechromosome CDS1382692 972 + 0.584362
menD ECA1211 menaquinone biosynthesis proteinchromosome CDS1379359 1683 + 0.595365
menF ECA1210 menaquinone-specific isochorismate synthasechromosome CDS1377747 1323 + 0.5548
menG ECA4264 S-adenosylmethionine:2-demethylmenaquinonemethyl transferasechromosome CDS4778952 486 + 0.528807
metK ECA3920 s-adenosylmethionine synthetasechromosome CDS4388480 1152 + 0.530382
moaA ECA2817 molybdenum cofactor biosynthesis protein Achromosome CDS3156435 990 - 0.530303
moaB ECA2816 molybdenum cofactor biosynthesis protein Bchromosome CDS3155882 519 - 0.539499
moaC ECA2815 molybdenum cofactor biosynthesis protein Cchromosome CDS3155369 495 - 0.573737
moaD ECA2814 molybdopterin converting factor subunit 1chromosome CDS3155127 246 - 0.52439
moaE ECA2813 molybdopterin converting factor subunit 2chromosome CDS3154672 453 - 0.560706
mobA ECA0017 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS22674 591 - 0.468697
mobB ECA0016 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS22163 522 - 0.442529
moeA ECA2836 molybdopterin biosynthesis proteinchromosome CDS3178804 1236 + 0.575243
moeB ECA2837 molybdopterin biosynthesis proteinchromosome CDS3180042 753 + 0.551129
mog ECA3885 molybdopterin biosynthesis proteinchromosome CDS4348133 588 - 0.534014
nadA ECA1378 quinolinate synthetase Achromosome CDS1558773 1062 + 0.541431
nadB ECA3285 L-aspartate oxidasechromosome CDS3689812 1602 + 0.529963
nadC ECA3797 nicotinate-nucleotide pyrophosphorylase [carboxylating]chromosome CDS4244964 891 + 0.533109
nadD ECA1306 nicotinate-nucleotide adenylyltransferase; conserved hypothetical proteinchromosome CDS1478437 642 - 0.554517
nadE ECA2412 NH3-dependent NAD(+) synthetasechromosome CDS2724246 825 + 0.501818
nadR ECA0463 transcriptional regulator of NAD metabolismchromosome CDS527517 1254 - 0.494418
nirE ECA2989 uroporphyrin-III C-methyltransferasechromosome CDS3335911 834 - 0.601918
pabB ECA2378 para-aminobenzoate synthase component Ichromosome CDS2688488 1455 + 0.537457
pabC ECA1800 4-amino-4-deoxychorismate lyasechromosome CDS2046622 798 + 0.522556
panB ECA3321 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS3732844 795 + 0.542138
panC ECA3322 pantoate--beta-alanine ligasechromosome CDS3733793 855 + 0.532164
panD ECA3323 aspartate 1-decarboxylasechromosome CDS3734665 381 + 0.532808
panE ECA1136 2-dehydropantoate 2-reductasechromosome CDS1288064 909 - 0.530253
panF ECA0259 sodium/pantothenate symporterchromosome CDS303438 1452 - 0.556474
pdxA ECA3858 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS4318033 1002 + 0.545908
pdxB ECA3060 erythronate-4-phosphate dehydrogenasechromosome CDS3416595 1137 - 0.558487
pdxH ECA1935 pyridoxamine 5'-phosphate oxidasechromosome CDS2191939 684 + 0.532164
pdxJ ECA3275 pyridoxal phosphate biosynthetic proteinchromosome CDS3680225 732 - 0.536885
pdxY ECA1937 pyridoxamine kinasechromosome CDS2194218 861 + 0.54007
pncB ECA2540 nicotinate phosphoribosyltransferasechromosome CDS2862696 1206 + 0.516584
pnuC ECA1379 nicotinamide mononucleotide transport proteinchromosome CDS1559893 726 + 0.490358
rfbI ECA1421 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydr ase reductasechromosome CDS1613498 960 + 0.4
ribA ECA1943 GTP cyclohydrolase IIchromosome CDS2202874 594 - 0.515152
ribB ECA0899 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS1002298 654 + 0.555046
ribD ECA1126 riboflavin biosynthesis proteinchromosome CDS1278982 1110 + 0.569369
ribF ECA3877 riboflavin biosynthesis protein ribf [includes: riboflavin kinase; FMN adenylyltransferase]chromosome CDS4338213 942 - 0.526539
ribH ECA1127 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS1280201 477 + 0.501048
rimK ECA2679 ribosomal protein S6 modification proteinchromosome CDS3014433 912 - 0.528509
serA ECA3905 D-3-phosphoglycerate dehydrogenasechromosome CDS4371418 1233 - 0.525547
serC ECA2594 phosphoserine aminotransferasechromosome CDS2928085 1086 - 0.523941
tbpA ECA3844 thiamine-binding periplasmic protein precursorchromosome CDS4296705 1065 + 0.54554
thiC ECA0232 thiamine biosynthesis proteinchromosome CDS271446 1995 - 0.552882
thiD ECA3196 phosphomethylpyrimidine kinasechromosome CDS3576767 804 - 0.593284
thiE ECA0231 thiamine-phosphate pyrophosphorylasechromosome CDS270808 642 - 0.571651
thiF ECA0230 thiamine biosynthesis adenylyltransferasechromosome CDS270027 780 - 0.589744
thiG ECA0229 thiazole biosynthesis proteinchromosome CDS269043 786 - 0.589059
thiH ECA0228 thiazole biosynthesis proteinchromosome CDS267925 1122 - 0.534759
thiL ECA1129 thiamine-monophosphate kinasechromosome CDS1281190 981 + 0.530071
thiM ECA3197 hydroxyethylthiazole kinasechromosome CDS3577567 795 - 0.583648
thiQ ECA3846 thiamine transport ATP-binding proteinchromosome CDS4299357 693 + 0.559885
thiS ECA0229A thiamine biosynthesis proteinchromosome CDS269830 201 - 0.507463
tkrA ECA0078 2-ketogluconate reductasechromosome CDS92960 966 - 0.549689
trpE ECA2296 anthranilate synthase component Ichromosome CDS2602958 1563 + 0.570697
trpG ECA2297 anthranilate synthase component IIchromosome CDS2604520 579 + 0.590674
ubiA ECA0627 4-hydroxybenzoate octaprenyl transferasechromosome CDS699974 864 + 0.513889
ubiC ECA0626 chorismate-pyruvate lyasechromosome CDS699428 534 + 0.529963
ubiD ECA0205 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS230345 1497 + 0.536406
ubiE ECA0196 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS222967 756 + 0.503968
ubiF ECA1320 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinolh ydroxylasechromosome CDS1494007 1167 + 0.55527
ubiG ECA1200 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1362525 726 - 0.546832
ubiX ECA3051 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3407589 573 - 0.527051
visB ECA0458 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS522816 1179 - 0.59542
visC ECA0457 putative monooxygenasechromosome CDS521576 1212 - 0.566007