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2024-05-05 14:08:37

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Yersinia pseudotuberculosis IP 32953, IP 32953

Number of genes found: 144

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB0458 putative exported proteinchromosome CDS544808 264 - 0.409091
NA YPTB2963 putative Nucleobase:Cation symporter, NCS1 familychromosome CDS3496321 1512 + 0.486772
NA YPTB3188 Putative Methenyl-THF synthetase-family protein (MTHFS).chromosome CDS3750229 597 + 0.519263
NA YPTB0344 putative coproporphyrinogen III oxidasechromosome CDS408910 1314 - 0.509893
NA YPTB1970 conserved hypothetical proteinchromosome CDS2320777 1998 - 0.466466
NA YPTB2568 putative D-isomer specific 2-hydroxyacid dehydrogenase family...chromosome CDS3037877 951 - 0.48265
NA YPTB0351 conserved hypothetical proteinchromosome CDS416548 1062 - 0.490584
NA YPTB3218 Putative conserved coproporphyrinogen III oxidasechromosome CDS3782017 1131 + 0.490716
NA YPTB0559 hypothetical proteinchromosome CDS661159 276 + 0.25
NA YPTB3910 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS4667900 981 - 0.512742
NA YPTB0125 putative vitamin B12 receptor protein, tonB dependentchromosome CDS147667 1875 + 0.455467
NA YPTB1371 putative iron ABC type transport, ATP-binding proteinchromosome CDS1633668 786 + 0.521628
NA YPTB1974 putative coenzyme synthetasechromosome CDS2326244 1287 + 0.525253
NA pYV0058 lcrG; putative Yop regulatorpYV CDS40174 288 - 0.465278
NA YPTB3300 Putative integral membrane efflux protein.chromosome CDS3918722 1557 - 0.486191
NA YPTB0078 possible transferasechromosome CDS90750 714 - 0.540616
NA YPTB3020 conserved hypothetical proteinchromosome CDS3559862 828 - 0.4843
NA YPTB1320 putative D-isomer specific 2-hydroxyacid dehydrogenase family...chromosome CDS1572120 966 - 0.599379
NA YPTB1545 putative ABC iron-siderophore transporter, ATP-binding subunitchromosome CDS1860083 849 - 0.485277
NA YPTB1343 siderophore/cobalamin ABC transporter, ATP-binding subunitchromosome CDS1601055 789 + 0.505703
NA YPTB1885 possible ThiF familychromosome CDS2226643 1734 + 0.355248
NA YPTB0264 conserved hypothetical proteinchromosome CDS309858 1497 + 0.486306
apbE YPTB0893 thiamine biosynthesis lipoproteinchromosome CDS1077603 1023 + 0.479961
bioA YPTB1181 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferasechromosome CDS1408162 1281 - 0.533177
bioB YPTB1182 biotin synthasechromosome CDS1409541 1038 + 0.510597
bioD YPTB1185 dethiobiotin synthetasechromosome CDS1412509 723 + 0.542185
bioD YPTB2191 putative dethiobiotin synthetasechromosome CDS2580936 669 + 0.433483
bioF YPTB1183 8-amino-7-oxononanoate synthasechromosome CDS1410578 1152 + 0.580729
birA YPTB0273 bifunctional protein BirAchromosome CDS327123 960 + 0.405208
btuC YPTB2333 puative ABC vitamin B12 transporter, permease subunit btuCchromosome CDS2755756 1008 - 0.485119
btuD YPTB2331 putative ABC vitamin B12 transporter, ATP-binding subunit btuDchromosome CDS2754349 762 - 0.469816
btuR YPTB2136 cob(I)alamin adenosyltransferasechromosome CDS2511865 591 - 0.49577
coaA YPTB0274 pantothenate kinasechromosome CDS328117 951 - 0.399579
coaA YPTB0050 phosphopantetheine adenylyltransferasechromosome CDS61528 480 - 0.4625
coaE YPTB0702 conserved hypothetical proteinchromosome CDS840104 621 - 0.470209
cspD YPTB1511 molybdopterin biosynthesis proteinchromosome CDS1814101 1275 - 0.502745
cysD YPTB0765 ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase)chromosome CDS921656 909 + 0.493949
cysG YPTB3743 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ...chromosome CDS4442876 1422 + 0.533755
cysG YPTB0764 siroheme synthase, catalyses four separate reactions required for the transformation of uroporphyrinogen III into sirohemechromosome CDS920227 1419 + 0.55814
cysH YPTB0761 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductasechromosome CDS917855 735 + 0.503401
ddhD YPTB0998 cdp-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS1198863 990 + 0.376768
dfp YPTB0045 DNA/pantothenate metabolism flavoproteinchromosome CDS57873 1218 - 0.481117
dxs YPTB0939 1-deoxyxylulose-5-phosphate synthase; flavoprotein, thiamin-bindingchromosome CDS1132414 1860 - 0.48871
fadI YPTB0265 NAD(P)H-flavin reductasechromosome CDS311409 702 + 0.485755
fhuC YPTB0739 ABC type hydroxymate-dependent iron transport ATP binding proteinchromosome CDS888067 795 + 0.544654
folA YPTB0628 dihydrofolate reductase type I; trimethoprim resistancechromosome CDS746293 483 + 0.490683
folB YPTB3413 putative dihydroneopterin aldolasechromosome CDS4054968 360 - 0.5
folC YPTB2615 dihydrofolate synthase / folylpolyglutamate synthasechromosome CDS3090306 1305 - 0.530268
folD YPTB1037 putative FolD bifunctional proteinchromosome CDS1244117 867 - 0.514418
folE YPTB1520 GTP cyclohydrolase Ichromosome CDS1826650 705 + 0.451064
folK YPTB0731 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokina se, PPPKchromosome CDS877124 480 - 0.53125
folP YPTB0475 dihydropteroate synthasechromosome CDS560052 834 + 0.478417
gshA YPTB0829 gamma-glutamate-cysteine ligasechromosome CDS996079 1560 + 0.48141
gshB YPTB3207 Glutathione synthetasechromosome CDS3773054 960 + 0.491667
hemA YPTB2004 glutamyl-tRNA reductasechromosome CDS2359761 1317 + 0.502658
hemB YPTB0262 delta-aminolevulinic acid dehydratasechromosome CDS307990 1023 + 0.476051
hemC YPTB0184 porphobilinogen deaminasechromosome CDS221351 942 - 0.548832
hemD YPTB0183 uroporphyrinogen-III synthasechromosome CDS220605 750 - 0.510667
hemE YPTB0294 uroporphyrinogen decarboxylasechromosome CDS353238 1068 + 0.511236
hemF YPTB2754 coproporphyrinogen III oxidase, aerobic HemFchromosome CDS3253174 930 + 0.533333
hemG YPTB0271 protoporphyrinogen oxidasechromosome CDS319416 534 + 0.428839
hemH YPTB0997 ferrochelatasechromosome CDS1197303 963 + 0.458982
hemL YPTB0742 glutamate-1-semialdehyde aminotransferase (aminomutase), PLP-dependentchromosome CDS892281 1281 - 0.509758
hemN YPTB0021 oxygen-independent coproporphyrinogen III oxidasechromosome CDS28357 1374 + 0.477438
hemX YPTB0182 putative uroporphyrin-III C-methyltransferasechromosome CDS219450 1125 - 0.503111
hemY YPTB0181 putative protoheme IX biogenesis proteinchromosome CDS218227 1221 - 0.523342
ilvB YPTB2216 putative acetolactate synthase large subunitchromosome CDS2614891 1668 + 0.502398
ilvC YPTB0145 ketol-acid reductoisomerasechromosome CDS176746 1479 + 0.503719
ilvE YPTB0136 branched-chain amino acid aminotransferasechromosome CDS167545 927 + 0.515642
ilvG YPTB0134 acetolactate synthase isozyme II large subunitchromosome CDS165622 1647 + 0.531876
ilvI YPTB0675 acetolactate synthase III, valine sensitive, large subunit FAD and thiamine PPi bindingchromosome CDS810018 1728 + 0.497685
ispA YPTB0940 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS1134429 921 - 0.504886
ispB YPTB0463 octaprenyl-diphosphate synthasechromosome CDS548669 972 - 0.490741
kbl YPTB0056 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS67722 1212 + 0.500825
ldhA YPTB2248 D-lactate dehydrogenasechromosome CDS2655709 993 + 0.461229
lipA YPTB1091 lipoic acid synthetasechromosome CDS1308003 966 - 0.503106
lipB YPTB1092 lipoate-protein ligase Bchromosome CDS1309161 702 - 0.488604
lplA YPTB2322 putative lipoate-protein ligase Achromosome CDS2744703 1017 - 0.454277
menA YPTB0096 4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS107999 918 - 0.489107
menB YPTB2558 naphthoate synthasechromosome CDS3025578 858 - 0.522144
menC YPTB2557 putative O-succinylbenzoate-CoA synthasechromosome CDS3024607 972 - 0.572016
menD YPTB2560 2-oxoglutarate decarboxylase / 2-succinyl-6-hydroxy-2,4-cyclo...chromosome CDS3027264 1704 - 0.565141
menF YPTB2561 menaquinone-specific isochorismate synthasechromosome CDS3029195 1374 - 0.510917
menG YPTB0095 S-adenosylmethionine:2-demethylmenaquinonemethyl transferasechromosome CDS107372 486 - 0.475309
metK YPTB3203 Putative S-adenosylmethionine synthetase.chromosome CDS3769297 1155 + 0.498701
moaA YPTB1190 molybdenum cofactor biosynthesis protein Achromosome CDS1419417 981 + 0.492355
moaC YPTB1191 molybdenum cofactor biosynthesis protein Cchromosome CDS1420620 480 + 0.533333
moaD YPTB1192 molybdopterin [mpt] converting factor, subunit 1chromosome CDS1421096 246 + 0.528455
moaE YPTB1193 molybdopterin [mpt] converting factor, subunit 2chromosome CDS1421341 456 + 0.539474
mobB YPTB0013 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS19223 531 - 0.40678
moeB YPTB1510 molybdopterin biosynthesis proteinchromosome CDS1813329 771 - 0.494163
mog YPTB0607 putative molybdochetalase in molybdopterine biosynthesischromosome CDS718745 588 + 0.438776
nadA YPTB1162 quinolinate synthetase Achromosome CDS1388174 1062 + 0.508475
nadB YPTB2898 L-aspartate oxidasechromosome CDS3428311 1638 + 0.484737
nadC YPTB0708 quinolinate phosphoribosyltransferasechromosome CDS847280 909 - 0.488449
nadD YPTB1100 putative nicotinate-nucleotide adenylyltransferasechromosome CDS1317521 663 - 0.491704
nadR YPTB0588 transcriptional regulator NadRchromosome CDS692626 1272 + 0.48978
pabA YPTB3732 para-aminobenzoate synthase glutamine amidotransferase compon...chromosome CDS4427122 576 - 0.520833
pabB YPTB1649 para-aminobenzoate synthase component Ichromosome CDS2001250 1377 - 0.511256
pabC YPTB2468 4-amino-4-deoxychorismate lyasechromosome CDS2913300 807 - 0.491945
panB YPTB0730 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS876058 801 - 0.521848
panC YPTB0729 pantothenate synthetasechromosome CDS875116 855 - 0.526316
panD YPTB0728 aspartate 1-decarboxylasechromosome CDS874325 381 - 0.485564
panE YPTB0945 2-dehydropantoate reductase, NADPH specific; alternative pyrimidine biosynthesischromosome CDS1138030 912 - 0.464912
panF YPTB3574 sodium/pantothenate symporter, SSS familychromosome CDS4254310 1455 + 0.527148
pdxA YPTB0634 NAD-dependent dehydrogenase/carboxylase; pyridoxine phosphate biosynthetic protein PdxJ-PdxA subunitchromosome CDS750256 996 - 0.502008
pdxB YPTB2620 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS3095902 1188 - 0.535354
pdxH YPTB2284 pyridoxamine 5'-phosphate oxidasechromosome CDS2695621 654 - 0.490826
pdxJ YPTB2887 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS3417712 732 - 0.491803
pdxY YPTB2282 pyridoxamine kinasechromosome CDS2693150 861 - 0.502904
pncB YPTB1437 putative nicotinate phosphoribosyltransferasechromosome CDS1725411 1206 - 0.472637
pnuC YPTB1163 intergral membrane NMN transport protein PnuCchromosome CDS1389357 726 + 0.461433
poxB YPTB1384 pyruvate dehydrogenase [cytochrome]chromosome CDS1646186 1722 - 0.522067
ribA YPTB2144 GTP cyclohydrolase IIchromosome CDS2523619 591 - 0.468697
ribB YPTB3404 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)chromosome CDS4042309 654 - 0.521407
ribD YPTB0934 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS1128413 1110 + 0.528829
ribE YPTB2304 riboflavin synthase alpha chainchromosome CDS2718594 657 - 0.452055
ribF YPTB0616 flavokinase and FAD synthetase (includes: riboflavin kinase and FMN adenyltransferase)chromosome CDS731075 939 + 0.500533
ribH YPTB0935 riboflavin synthase, beta chainchromosome CDS1129658 471 + 0.475584
serA YPTB3189 D-3-phosphoglycerate dehydrogenase (PGDH)chromosome CDS3751090 1242 - 0.486312
serC YPTB1414 phosphoserine aminotransferasechromosome CDS1692113 1086 + 0.474217
tbpA YPTB0663 ABC transporter, periplasmic thiamine binding protein tbpAchromosome CDS792494 993 - 0.498489
thiC YPTB0290 thiamine biosynthesis protein ThiCchromosome CDS348433 2046 - 0.51955
thiD YPTB2824 putative phosphomethylpyrimidine kinasechromosome CDS3339691 801 - 0.558052
thiE YPTB0289 thiamine-phosphate pyrophosphorylasechromosome CDS347772 648 - 0.532407
thiF YPTB0288 thiamine biosynthesis protein ThiFchromosome CDS346985 798 - 0.5401
thiG YPTB0286 thiamine biosynthesis protein ThiGchromosome CDS345956 816 - 0.53799
thiH YPTB0285 thiamine biosynthesis protein ThiHchromosome CDS344833 1131 - 0.501326
thiL YPTB0937 thiamin-monophosphate kinasechromosome CDS1130806 990 + 0.489899
thiQ YPTB0661 ABC thiamine transporter, ATP binding subunit thiQchromosome CDS790214 684 - 0.542398
thiS YPTB0287 thiamin biosynthesis ThiSchromosome CDS346773 216 - 0.5
trpE YPTB2130 anthranilate synthase component Ichromosome CDS2506825 1566 - 0.505109
trpG YPTB2129 anthranilate synthase component IIchromosome CDS2506247 579 - 0.518135
ubiA YPTB0367 4-hydroxybenzoate octaprenyltransferasechromosome CDS438907 867 + 0.483276
ubiC YPTB0366 putative chorismate--pyruvate lyasechromosome CDS438217 525 + 0.506667
ubiE YPTB0255 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS302196 756 + 0.44709
ubiF YPTB1114 putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydr...chromosome CDS1333368 1182 + 0.535533
ubiG YPTB1255 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1496686 729 - 0.499314
ubiH YPTB3184 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3745990 1179 - 0.552163
ubiX YPTB2611 probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3086294 573 - 0.467714
visC YPTB3183 Putative monooxygenasechromosome CDS3744597 1221 - 0.550369
wbyH YPTB1003 putative exported proteinchromosome CDS1203967 1284 + 0.351246
ybtS YPTB1601 putative salicylate synthetasechromosome CDS1946845 1305 + 0.55249
ygcM YPTB0758 putative 6-pyruvoyl tetrahydrobiopterin synthase family proteinchromosome CDS913520 360 - 0.475