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2024-05-07 17:23:57

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Synechococcus sp. WH 8102, WH8102

Number of genes found: 116

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Synechococcus sp. WH 8102, WH8102
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SYNW1794 4a-hydroxytetrahydrobiopterin dehydratase (PCD)chromosome CDS1721060 297 + 0.619529
NA SYNW0277 cob(I)alamin adenosyltransferasechromosome CDS275969 594 + 0.643098
NA SYNW1006 Protein of unknown function DUF117, putative carboxy-lyasechromosome CDS1004497 1563 - 0.642994
NA SYNW2287 Possible magnesium protoprophyrin IX methyltransferasechromosome CDS2182176 714 + 0.609244
NA SYNW1139 hypotheticalchromosome CDS1127972 393 + 0.541985
NA SYNW1731 Biotin/lipoate A/B protein ligase familychromosome CDS1662607 753 + 0.666667
NA SYNW0991 conserved hypothetical proteinchromosome CDS988788 717 + 0.570432
NA SYNW1504 conserved hypothetical proteinchromosome CDS1455919 477 - 0.584906
NA SYNW0714 conserved hypothetical proteinchromosome CDS699247 549 - 0.64663
NA SYNW0040 conserved hypothetical proteinchromosome CDS39293 426 - 0.610329
NA SYNW1869 conserved hypothetical proteinchromosome CDS1782927 1185 - 0.667511
NA SYNW2052 conserved hypothetical proteinchromosome CDS1949349 1149 + 0.646649
NA SYNW1776 conserved hypothetical proteinchromosome CDS1705694 813 - 0.666667
NA SYNW1708 conserved hypothetical proteinchromosome CDS1641084 252 - 0.603175
NA SYNW2433 Aminotransferase class IVchromosome CDS2338130 840 + 0.652381
NA SYNW0503 Putative nicotinate-nucleotide adenylyltransferasechromosome CDS501271 576 - 0.673611
NA SYNW1007 probable 2-phosphosulfolactate phosphatasechromosome CDS1006124 729 + 0.655693
NA SYNW0465 conserved hypothetical proteinchromosome CDS469039 483 - 0.573499
NA SYNW1674 possible menaquinone biosynthesis methyltransferasechromosome CDS1611043 702 - 0.636752
NA SYNW2432 possible p-aminobenzoate synthetasechromosome CDS2336847 1287 + 0.677545
NA SYNW2201 6-pyruvoyl-tetrahydropterin synthase homologchromosome CDS2099753 921 - 0.615635
NA SYNW1162 hypotheticalchromosome CDS1154611 1041 - 0.368876
NA SYNW2161 putative 4'-phosphopantetheinyl transferasechromosome CDS2055438 657 - 0.630137
NA SYNW0887 possible oxidasechromosome CDS850810 624 + 0.528846
NA SYNW1605 DUF170chromosome CDS1546314 219 + 0.625571
NA SYNW2200 putative riboflavin-specific deaminasechromosome CDS2099073 672 - 0.635417
NA SYNW2197 conserved hypothetical proteinchromosome CDS2096957 408 - 0.588235
NA SYNW0875 conserved hypothetical proteinchromosome CDS839671 567 - 0.636684
BioA SYNW0629 putative diaminopelargonic acid synthasechromosome CDS611438 1311 - 0.640732
BioB SYNW0933 biotin synthasechromosome CDS893516 978 - 0.642127
BioD SYNW0631 putative Dethiobiotin synthasechromosome CDS613206 660 - 0.630303
BirA SYNW1876 putative Biotin--acetyl-CoA-carboxylase ligasechromosome CDS1791738 771 - 0.642023
CobN SYNW1240 cobalamin biosynthetic protein CobNchromosome CDS1233534 3729 + 0.639582
CobS SYNW0245 Cobalamin-5-phosphate synthase CobSchromosome CDS246367 762 + 0.666667
Dxs SYNW1292 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS1289301 1932 - 0.597309
ahcY, sahH SYNW0119 putative adenosylhomocysteinasechromosome CDS117498 1431 + 0.606569
bioF SYNW0634 putative 8-amino-7-oxononanoate synthasechromosome CDS615291 1128 - 0.669326
cbiA,cobB SYNW0748 putative Cobyrinic acid a,c-diamide synthasechromosome CDS728389 1359 - 0.646063
cbiD SYNW0046 cobalamin biosynthesis protein Dchromosome CDS42588 1068 + 0.65824
cbiG/cobJ fusion SYNW2126 bifunctional cbiH protien and PRECORRIN-3B C17-METHYLTRANSFERASEchromosome CDS2012686 1635 + 0.665443
chlD SYNW0213 Protoporphyrin IX Magnesium chelatase subunit ChlDchromosome CDS213608 2109 - 0.667615
chlG SYNW1677 chlorophyll synthase 33 kD subunitchromosome CDS1612737 1011 + 0.591494
chlH SYNW0820 Protoporphyrin IX Magnesium chelatase subunit chlHchromosome CDS788971 4011 + 0.586138
chlI SYNW0716 Protoporphyrin IX Magnesium-chelatase subunit ChlIchromosome CDS700271 1089 - 0.632691
coaD SYNW1248 putative pantetheine-phosphate adenylyltransferasechromosome CDS1243409 492 + 0.577236
coaE SYNW2354 putative dephospho-CoA kinasechromosome CDS2257560 597 + 0.61139
cobA SYNW2475 putative uroporphyrin-III c-methyltransferasechromosome CDS2377767 789 - 0.622307
cobB SYNW1704 Cobyric acid synthase CobBchromosome CDS1637307 1491 + 0.649899
cobD SYNW1651 putative cobalamin biosynthetic proteinchromosome CDS1588419 993 + 0.650554
cobH SYNW0074 putative Precorrin-8X methylmutase CobHchromosome CDS71117 627 + 0.6874
cobI/cbiL SYNW0653 PRECORRIN-2 C20-METHYLTRANSFERASEchromosome CDS638214 732 + 0.666667
cobL SYNW1596 putative precorrin-6y methylasechromosome CDS1538409 1248 + 0.675481
cobM SYNW1844 PUTATIVE PRECORRIN-4 C11-METHYLTRANSFERASEchromosome CDS1760258 759 + 0.602108
cobO SYNW1750 possible cob(I)alamin adenosyltransferasechromosome CDS1681976 666 + 0.638138
cobU/cobP SYNW1216 putative cobinamide kinasechromosome CDS1206909 552 - 0.617754
crtE SYNW0742 geranylgeranyl pyrophosphate synthasechromosome CDS723682 930 + 0.617204
cysH SYNW2164 Phosphoadenosine phosphosulfate reductasechromosome CDS2057243 765 - 0.626144
dfp (coaBC) SYNW0301 putative p-pantothenate cysteine ligase and p-pantothenenoylcysteine decarboxylasechromosome CDS298890 1308 + 0.626911
folB SYNW1485 possible dihydroneopterin aldolasechromosome CDS1436174 372 - 0.629032
folC SYNW1635 putuative bifunctional Dihydrofolate/Folylpolyglutamate synthasechromosome CDS1572829 1224 + 0.64134
folD SYNW0740 putuative bifunctional Methylenetetrahydrofolate dehydrogenase Methenyltetrahydrofolate/cyclohydrolasechromosome CDS722075 882 + 0.623583
folE SYNW1734 putative GTP cyclohydrolase Ichromosome CDS1665291 762 - 0.595801
folK SYNW0216 possible2-amino-4-hydroxy-6-hydroxymethyldihydro pteridinepyrophosphokinasechromosome CDS216407 492 + 0.686992
folP SYNW0822 putative dihydropteroate synthasechromosome CDS793966 909 - 0.611661
gshB SYNW2309 putative glutathione synthetasechromosome CDS2212355 924 - 0.645022
hemA SYNW1117 Possible glutamyl-tRNA reductasechromosome CDS1109403 1299 + 0.60816
hemB SYNW1933 possible delta-aminolevulinic acid dehydratasechromosome CDS1837481 1002 - 0.607784
hemC SYNW1785 Porphobilinogen deaminasechromosome CDS1714571 954 + 0.613208
hemD SYNW2210 putative uroporphyrinogen III synthasechromosome CDS2106419 789 + 0.667934
hemE SYNW1495 Uroporphyrinogen decarboxylase (URO-D)chromosome CDS1449202 1059 + 0.607177
hemF SYNW2040 Coproporphyrinogen III oxidasechromosome CDS1935075 1167 - 0.624679
hemH SYNW1747 Ferrochelatasechromosome CDS1678942 1176 - 0.603741
hemL,gsa SYNW1809 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS1735513 1287 + 0.630148
hemN SYNW1646 possible oxygen independent coproporphyrinogen III oxidasechromosome CDS1583604 1224 - 0.639706
ilvB SYNW1746 acetolactate synthasechromosome CDS1677032 1854 - 0.63754
ilvC SYNW1650 ketol-acid reductoisomerasechromosome CDS1587419 996 + 0.604418
ilvE SYNW1239 putative branched-chain amino acid aminotransferasechromosome CDS1232555 915 - 0.590164
lipA SYNW2130 lipoic acid synthetasechromosome CDS2017783 870 + 0.645977
lipA SYNW0929 Lipoic acid synthetasechromosome CDS889860 900 + 0.636667
lipB SYNW0668 putative lipoate-protein ligase Bchromosome CDS651789 696 + 0.652299
menA SYNW2307 1,4-dihydroxy-2-naphthoate (DHNA) octaprenyltransferase; UbiA prenyltranferase familychromosome CDS2209979 933 - 0.652733
menB SYNW0998 Naphthoate synthasechromosome CDS995851 870 + 0.667816
menD SYNW0997 Menaquinone biosynthesis protein; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthasechromosome CDS994208 1638 + 0.680708
menF SYNW2308 Isochorismate synthasechromosome CDS2210982 1407 + 0.65032
metK SYNW1987 S-adenosylmethionine synthetasechromosome CDS1893498 1260 + 0.635714
moaA,narA,narAB SYNW2460 molybdenum cofactor biosynthesis protein Achromosome CDS2365627 1041 - 0.6244
moaB1 SYNW2474 molybdenum cofactor biosynthesis protein B1chromosome CDS2377248 498 + 0.616466
moaC SYNW2468 molybdenum cofactor biosynthesis protein Cchromosome CDS2373143 477 + 0.624738
moaD SYNW2473 molydbenum cofactor biosynthesis protein D (molybdopterin converting factor small subunit)chromosome CDS2376966 231 - 0.632035
moaE SYNW2472 molybdenum cofactor biosynthesis protein E (molydbopterin converting factor large subunit)chromosome CDS2376534 429 - 0.678322
mobA SYNW2461 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS2366664 576 - 0.630208
moeA SYNW2469 molybdenum cofactor biosynthesis protein MoeAchromosome CDS2373603 1251 + 0.676259
nadA SYNW1316 Quinolinate synthetase A proteinchromosome CDS1311281 933 + 0.605573
nadB SYNW2192 putative L-aspartate oxidasechromosome CDS2089880 1650 + 0.66303
nadC SYNW2320 Nicotinate-nucleotide pyrophosphorylase:Quinolinate phosphoriobsyl transferasechromosome CDS2221201 849 - 0.660777
pabA SYNW2315 para-aminobenzoate synthase component IIchromosome CDS2215919 603 + 0.631841
panB SYNW1645 putative Ketopantoate hydroxymethyltransferasechromosome CDS1582910 804 + 0.644279
panC, cmk SYNW2027 putative bifunctional enzyme; pantothenate synthetase/cytidylate kinasechromosome CDS1924948 1506 - 0.651394
pdxA SYNW0035 putative pyridoxal phosphate biosynthetic protein PdxAchromosome CDS34496 1023 - 0.637341
pdxJ SYNW0910 Pyridoxal phosphate biosynthetic protein PdxJchromosome CDS869154 750 + 0.633333
ribA/ribB SYNW1263 possible GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS1260179 1704 + 0.612676
ribD SYNW1590 putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductasechromosome CDS1532817 1065 - 0.685446
ribE SYNW1865 Putative Riboflavin synthase alpha chainchromosome CDS1779545 630 - 0.644444
ribF SYNW1603 putative riboflavin kinase/FAD synthasechromosome CDS1544188 930 + 0.669892
ribH SYNW0082 Putative 6,7-dimethyl-8-ribityllumazine synthase or riboflavin synthase beta chainchromosome CDS79853 483 + 0.530021
rimK SYNW1384 possible ribosomal protein S6 modification proteinchromosome CDS1363730 1401 - 0.584582
sds SYNW1011 polyprenyl synthetase; solanesyl diphosphate synthase (sds)chromosome CDS1009631 972 + 0.61214
serA SYNW0533 putative D-3-phosphoglycerate dehydrogenase (PGDH)chromosome CDS526323 1587 + 0.642722
thiC SYNW0140 thiamin biosynthesis proteinchromosome CDS135007 1452 + 0.600551
thiE SYNW1604 Thiamine monophosphate synthase (TMP)chromosome CDS1545261 1050 + 0.640952
thiG SYNW0054 thiamin biosynthesis proteinchromosome CDS50807 825 - 0.64
thiL SYNW0031 putative thiamine monophosphate kinasechromosome CDS31341 987 - 0.651469
trpE SYNW2045 Anthranilate synthase component I and chorismate binding enzymechromosome CDS1940531 1521 + 0.64497
ubiA SYNW1847 probable 4-hydroxybenzoate-octaprenyltransferasechromosome CDS1763682 894 + 0.637584
ubiH SYNW0816 possible 2-octaprenyl-6-methoxyphenol 4-monoxygenase; UbiHchromosome CDS785845 1146 - 0.605585
ubiX SYNW1201 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS1191031 609 - 0.625616