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2024-05-08 08:43:09

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 149

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VC0029 branched-chain amino acid amiotransferasechromosome I CDS26643 960 - 0.536458
VC0031 acetolactate synthase II, large subunitchromosome I CDS27889 1647 - 0.553127
VC0055 coproporphyrinogen III oxidase, aerobicchromosome I CDS50689 918 + 0.498911
VC0061 thiamin biosynthesis protein ThiCchromosome I CDS59988 1938 + 0.475748
VC0062 thiamin-phosphate pyrophosphorylasechromosome I CDS61929 1323 + 0.464097
VC0063 thiF proteinchromosome I CDS63238 777 + 0.503218
VC0064 thiS proteinchromosome I CDS63957 258 + 0.484496
VC0065 thiG proteinchromosome I CDS64220 771 + 0.50454
VC0066 thiH proteinchromosome I CDS64987 1113 + 0.477987
VC0083 ubiquinone/menaquinone biosynthesis methlytransferase UbiEchromosome I CDS81663 783 + 0.49553
VC0094 4-hydroxybenzoate octaprenyltransferasechromosome I CDS93464 855 - 0.495906
VC0095 chorismate--pyruvate lyasechromosome I CDS94319 552 - 0.467391
VC0105 delta-aminolevulinic acid dehydratasechromosome I CDS100811 1044 + 0.496169
VC0113 methyltransferase-related proteinchromosome I CDS108252 669 + 0.469357
VC0116 oxygen-independent coproporphyrinogen III oxidasechromosome I CDS110051 1443 + 0.479556
VC0117 hemY proteinchromosome I CDS111557 1197 - 0.507937
VC0118 uroporphyrin-III C-methyltransferase, putativechromosome I CDS112750 1200 - 0.52
VC0119 uroporphyrinogen-III synthasechromosome I CDS113933 783 - 0.503193
VC0120 porphobilinogen deaminasechromosome I CDS114761 954 - 0.541929
VC0156 vitamin B12 receptorchromosome I CDS145370 1836 + 0.432462
VC0162 ketol-acid reductoisomerasechromosome I CDS157441 1485 + 0.476094
VC0180 conserved hypothetical proteinchromosome I CDS181732 1755 + 0.435328
VC0201 iron(III) ABC transporter, ATP-binding proteinchromosome I CDS208648 858 + 0.52331
VC0215 DNA/pantothenate metabolism flavoproteinchromosome I CDS222087 1200 - 0.5525
VC0222 lipopolysaccharide core biosynthesis protein KdtBchromosome I CDS228271 495 - 0.490909
VC0251 acyl protein synthase/acyl-CoA reductase RfbNchromosome I CDS257292 2478 + 0.423729
VC0267 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome I CDS272562 924 - 0.532468
VC0309 conserved hypothetical proteinchromosome I CDS320728 1842 + 0.487514
VC0312 NAD(P)H-flavin reductasechromosome I CDS322851 711 + 0.488045
VC0320 pantothenate kinasechromosome I CDS333687 1128 - 0.43883
VC0332 uroporphyrinogen decarboxylasechromosome I CDS350511 1080 + 0.505556
VC0386 phosphoadenosine phosphosulfate reductasechromosome I CDS400446 762 + 0.454068
VC0434 octaprenyl-diphosphate synthasechromosome I CDS465207 1047 - 0.468959
VC0440 dihydrofolate reductasechromosome I CDS469805 498 + 0.502008
VC0444 pyridoxal phosphate biosynthetic protein PdxAchromosome I CDS472552 993 - 0.501511
VC0455 oxygen-independent coproporphyrinogen III oxidase, putativechromosome I CDS486470 1176 - 0.520408
VC0468 glutathione synthetasechromosome I CDS496898 957 - 0.493208
VC0472 S-adenosylmethionine synthasechromosome I CDS500170 1158 - 0.502591
VC0524 dihydroneopterin aldolase FolB, putativechromosome I CDS557976 390 + 0.533333
VC0525 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome I CDS558281 588 + 0.511905
VC0556 glutamate--cysteine ligasechromosome I CDS590084 1575 + 0.502857
VC0591 pantoate--beta-alanine ligasechromosome I CDS618683 882 - 0.498866
VC0592 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome I CDS619575 795 - 0.489308
VC0593 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome I CDS620372 504 - 0.519841
VC0626 glutamate-1-semialdehyde 2,1-aminomutasechromosome I CDS664265 1299 - 0.504234
VC0638 dihydropteroate synthasechromosome I CDS680126 837 + 0.458781
VC0681 riboflavin kinase/FMN adenylyltransferasechromosome I CDS727688 969 + 0.506708
VC0773 vibriobactin-specific isochorismate synthasechromosome I CDS828821 1188 - 0.518519
VC0779 ferric vibriobactin ABC transporter, ATP-binding proteinchromosome I CDS835668 840 + 0.509524
VC0800 citX proteinchromosome I CDS856992 537 + 0.538175
VC0801 citG proteinchromosome I CDS857506 942 + 0.519108
VC0863 conserved hypothetical proteinchromosome I CDS927382 1560 + 0.485256
VC0880 conserved hypothetical proteinchromosome I CDS941187 1605 + 0.497196
VC0889 1-deoxyxylulose-5-phosphate synthasechromosome I CDS947523 1881 - 0.518341
VC0890 geranyltranstransferasechromosome I CDS949423 885 - 0.514124
VC0924 capK protein, putativechromosome I CDS986597 1341 + 0.460104
VC0926 hypothetical proteinchromosome I CDS989007 1173 + 0.475703
VC0943 lipoic acid synthetasechromosome I CDS1008816 966 - 0.489648
VC0944 lipoate-protein ligase Bchromosome I CDS1009774 660 - 0.462121
VC0963 VisC-related proteinchromosome I CDS1027836 1194 + 0.504188
VC0987 ferrochelatasechromosome I CDS1051253 975 + 0.471795
VC1001 folylpolyglutamate synthase/dihydrofolate synthasechromosome I CDS1071904 1266 + 0.509479
VC1024 molybdenum cofactor biosynthesis protein Achromosome I CDS1093132 1005 + 0.477612
VC1025 molybdenum cofactor biosynthesis protein Bchromosome I CDS1094196 513 + 0.497076
VC1026 molybdenum cofactor biosynthesis protein Cchromosome I CDS1094716 483 + 0.515528
VC1027 molybdenum cofactor biosynthesis protein Dchromosome I CDS1095195 246 + 0.504065
VC1028 molybdenum cofactor biosynthesis protein Echromosome I CDS1095442 453 + 0.523179
VC1040 cob(I)alamin adenosyltransferasechromosome I CDS1108745 606 - 0.493399
VC1111 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferasechromosome I CDS1180544 1287 - 0.509713
VC1112 biotin synthasechromosome I CDS1181957 1053 + 0.510921
VC1113 8-amino-7-oxononanoate synthasechromosome I CDS1182993 1155 + 0.524675
VC1115 dethiobiotin synthetasechromosome I CDS1184923 717 + 0.479777
VC1159 phosphoserine aminotransferasechromosome I CDS1230431 1140 + 0.487719
VC1160 hypothetical proteinchromosome I CDS1231651 990 - 0.511111
VC1173 anthranilate synthase component IIchromosome I CDS1246719 612 - 0.527778
VC1174 anthranilate synthase component Ichromosome I CDS1247327 1572 - 0.513359
VC1237 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome I CDS1311451 1110 + 0.524324
VC1238 cobalamin (5`-phosphate) synthasechromosome I CDS1312560 786 + 0.5
VC1239 cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome I CDS1313354 540 + 0.522222
VC1244 vitamin B12 ABC transporter, permease protein BtuC, putativechromosome I CDS1315915 1008 + 0.526786
VC1245 vitamin B12 ABC transporter, ATP-binding protein BtuD, putativechromosome I CDS1316909 756 + 0.506614
VC1257 3-demethylubiquinone-9 3-methyltransferasechromosome I CDS1329118 738 - 0.487805
VC1263 GTP cyclohydrolase IIchromosome I CDS1337023 651 + 0.454685
VC1296 phosphomethylpyrimidine kinasechromosome I CDS1375081 849 + 0.492344
VC1299 6-pyruvoyl tetrahydrobiopterin synthase, putativechromosome I CDS1379571 369 + 0.444444
VC1303 para-aminobenzoate synthase, component Ichromosome I CDS1383845 1377 - 0.488744
VC1363 siroheme synthase component enzymechromosome I CDS1452643 939 + 0.457934
VC1388 lipoate-protein ligase Achromosome I CDS1479156 1017 + 0.509341
VC1523 conserved hypothetical proteinchromosome I CDS1638461 828 + 0.466184
VC1524 ABC transporter, permease proteinchromosome I CDS1639295 699 + 0.516452
VC1526 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome I CDS1640678 612 + 0.486928
VC1527 molybdopterin biosynthesis MoeA proteinchromosome I CDS1641286 1821 + 0.503569
VC1590 acetolactate synthasechromosome I CDS1700984 1704 + 0.521127
VC1833 quinolinate synthetase Achromosome I CDS1974555 1062 - 0.467043
VC1942 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolasechromosome I CDS2093523 936 + 0.497863
VC1945 FAD monooxygenase, PheA/TfdB familychromosome I CDS2095589 1464 + 0.482924
VC1972 o-succinylbenzoate-CoA synthasechromosome I CDS2123261 999 - 0.527528
VC1973 naphthoate synthasechromosome I CDS2124347 891 - 0.531987
VC1975 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase/2-oxoglutarate decarboxylasechromosome I CDS2126019 1713 - 0.533567
VC1976 menaquinone-specific isochorismate synthasechromosome I CDS2127728 1308 - 0.527523
VC2018 4-amino-4-deoxychorismate lyasechromosome I CDS2171894 834 - 0.476019
VC2108 erythronate-4-phosphate dehydrogenasechromosome I CDS2264806 1164 - 0.499141
VC2180 glutamyl-tRNA reductasechromosome I CDS2324888 1260 - 0.500794
VC2266 thiamin-monophosphate kinasechromosome I CDS2421243 1005 - 0.503483
VC2268 riboflavin synthase, beta subunitchromosome I CDS2422778 522 - 0.465517
VC2269 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase IIchromosome I CDS2423513 1110 - 0.514414
VC2270 riboflavin synthase, alpha subunitchromosome I CDS2424663 654 - 0.487768
VC2271 riboflavin-specific deaminasechromosome I CDS2425321 1104 - 0.519022
VC2281 ribosomal protein S6 modification proteinchromosome I CDS2436201 906 + 0.502208
VC2289 thiamin biosynthesis lipoprotein ApbEchromosome I CDS2443773 1104 - 0.460145
VC2307 2-dehydropantoate 2-reductasechromosome I CDS2458775 891 + 0.499439
VC2311 HesA/MoeB/ThiF family proteinchromosome I CDS2461974 822 - 0.492701
VC2333 ribosomal protein S6 modification protein-related proteinchromosome I CDS2482789 1452 + 0.491047
VC2366 s-adenosylmethionine:2-demethylmenaquinonemethyl transferasechromosome I CDS2523337 489 - 0.445808
VC2380 cobalamin biosynthesis protein CbiB, putativechromosome I CDS2544966 954 + 0.520964
VC2422 nicotinate-nucleotide pyrophosphorylase, carboxylatingchromosome I CDS2596058 891 + 0.54321
VC2427 conserved hypothetical proteinchromosome I CDS2601508 642 + 0.503115
VC2458 pyridoxal phosphate biosynthetic protein PdxJchromosome I CDS2640997 732 - 0.512295
VC2469 l-aspartate oxidasechromosome I CDS2650206 1653 + 0.508167
VC2474 visC proteinchromosome I CDS2654602 1230 - 0.531707
VC2475 ubiH proteinchromosome I CDS2655843 1209 - 0.531017
VC2479 conserved hypothetical proteinchromosome I CDS2658396 585 + 0.507692
VC2481 D-3-phosphoglycerate dehydrogenasechromosome I CDS2660000 1230 + 0.49187
VC2483 acetolactate synthase III, large subunitchromosome I CDS2661957 1722 - 0.479094
VC2504 2-hydroxyacid dehydrogenase family proteinchromosome I CDS2691637 978 - 0.510225
VC2537 thiamine ABC transporter, ATP-binding protein, putativechromosome I CDS2719014 735 - 0.518367
VC2539 thiamin ABC transporter, periplasmic thiamin-binding proteinchromosome I CDS2721344 993 - 0.511581
VC2541 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome I CDS2722598 636 - 0.553459
VC2560 sulfate adenylate transferase, subunit 2chromosome I CDS2741271 948 - 0.498945
VC2561 uroporphyrin-III C-methyltransferasechromosome I CDS2742282 900 - 0.547778
VC2619 para-aminobenzoate synthase glutamine amidotransferase, component IIchromosome I CDS2788137 582 - 0.491409
VC2672 s-adenosylmethionine:2-demethylmenaquinonemethyl transferasechromosome I CDS2839613 516 - 0.5
VC2673 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome I CDS2840203 918 - 0.496732
VC2755 protoporphyrinogen oxidasechromosome I CDS2939455 525 - 0.459048
VCA0098 nicotinate phosphoribosyltransferasechromosome II CDS105513 1308 + 0.477829
VCA0192 D-lactate dehydrogenasechromosome II CDS208570 996 - 0.485944
VCA0207 NH(3)-dependent NAD(+) synthetasechromosome II CDS223891 831 - 0.509025
VCA0208 conserved hypothetical proteinchromosome II CDS224824 528 + 0.486742
VCA0523 aminotransferase, class IIchromosome II CDS457023 1170 - 0.405983
VCA0616 GTP cyclohydrolasechromosome II CDS551233 693 - 0.503608
VCA0617 molybdopterin biosynthesis MoeA proteinchromosome II CDS551966 1308 + 0.53211
VCA0618 molybdopterin biosynthesis MoeB proteinchromosome II CDS553276 765 + 0.518954
VCA0630 D-3-phosphoglycerate dehydrogenase-related proteinchromosome II CDS567291 972 - 0.512346
VCA0727 cobyric acid synthasechromosome II CDS670520 1455 - 0.533333
VCA0827 pterin-4-alpha-carbinolamine dehydratasechromosome II CDS772435 330 - 0.439394
VCA0886 2-amino-3-ketobutyrate coenzyme A ligasechromosome II CDS838926 1194 - 0.505863
VCA0909 oxygen-independent coproporphyrinogen III oxidase, putativechromosome II CDS864067 1368 - 0.494883
VCA1060 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome II CDS1010684 657 - 0.515982
VCA1079 pyridoxamine 5`-phosphate oxidasechromosome II CDS1032448 636 - 0.488994