Gene list
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COG category: Coenzyme transport and metabolism
Organism: Xylella fastidiosa 9a5c
Number of genes found: 89
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Xylella fastidiosa 9a5c | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | XF1888 | thiamine biosynthesis protein | RecName: Full=Phosphomethylpyrimidine synthase; EC=4.1.99.17; AltName: Full=Hydroxymethylpyrimidine phosphate synthase; Short=HMP-P synthase; Short=HMP-phosphate synthase; Short=HMPP synthase; AltName: Full=Thiamine biosynthesis protein ThiC; | chromosome | CDS | 1794839 | 1890 | + | 0.527513 |
NA | XF0017 | coproporphyrinogen III oxidase, aerobic | RecName: Full=Oxygen-dependent coproporphyrinogen-III oxidase; Short=CPO; Short=Coprogen oxidase; Short=Coproporphyrinogenase; EC=1.3.3.3; | chromosome | CDS | 17000 | 960 | + | 0.533333 |
NA | XF1821 | acetolactate synthase isozyme II, large subunit | RecName: Full=Acetolactate synthase; EC=2.2.1.6; | chromosome | CDS | 1735598 | 1752 | - | 0.547945 |
NA | XF0950 | riboflavin-specific deaminase | RecName: Full=Riboflavin biosynthesis protein RibD; | chromosome | CDS | 912455 | 1095 | + | 0.587215 |
NA | XF1822 | ketol-acid reductoisomerase | RecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; | chromosome | CDS | 1737396 | 1101 | - | 0.497729 |
NA | XF2302 | glutamate-1-semialdehyde 2,1-aminomutase | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase; Short=GSA; EC=5.4.3.8; AltName: Full=Glutamate-1-semialdehyde aminotransferase; Short=GSA-AT; | chromosome | CDS | 2187092 | 1335 | - | 0.579775 |
NA | XF2477 | dethiobiotin synthetase | RecName: Full=ATP-dependent dethiobiotin synthetase BioD; EC=6.3.3.3; AltName: Full=DTB synthetase; Short=DTBS; AltName: Full=Dethiobiotin synthase; | chromosome | CDS | 2360408 | 681 | + | 0.597651 |
NA | XF1914 | anthranilate synthase component I | SubName: Full=Anthranilate synthase component I; | chromosome | CDS | 1819904 | 1497 | + | 0.386106 |
NA | XF2013 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1922283 | 612 | + | 0.566993 |
NA | XF0436 | dihydroneopterin aldolase | SubName: Full=Dihydroneopterin aldolase; | chromosome | CDS | 446104 | 363 | + | 0.484848 |
NA | XF0594 | thiamine biosynthesis lipoprotein ApbE precursor | SubName: Full=Thiamine biosynthesis lipoprotein ApbE; | chromosome | CDS | 572810 | 936 | - | 0.556624 |
NA | XF0324 | periplasmic iron-binding protein | SubName: Full=Periplasmic iron-binding protein; | chromosome | CDS | 340558 | 972 | + | 0.567901 |
NA | XF2326 | phosphoserine aminotransferase | RecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; Short=PSAT; | chromosome | CDS | 2205578 | 1089 | - | 0.512397 |
NA | XF0060 | pyridoxal phosphate biosynthetic protein | RecName: Full=Pyridoxine 5-phosphate synthase; Short=PNP synthase; EC=2.6.99.2; | chromosome | CDS | 53904 | 783 | + | 0.518519 |
NA | XF0952 | riboflavin synthase alpha chain | SubName: Full=Riboflavin synthase alpha chain; | chromosome | CDS | 914136 | 603 | + | 0.555556 |
NA | XF2536 | conserved hypothetical protein | RecName: Full=Dephospho-CoA kinase; EC=2.7.1.24; AltName: Full=Dephosphocoenzyme A kinase; | chromosome | CDS | 2409818 | 639 | - | 0.539906 |
NA | XF1337 | pyridoxamine 5'-phosphate oxidase | RecName: Full=Pyridoxine/pyridoxamine 5-phosphate oxidase; EC=1.4.3.5; AltName: Full=PNP/PMP oxidase; Short=PNPOx; AltName: Full=Pyridoxal 5-phosphate synthase; | chromosome | CDS | 1286542 | 627 | + | 0.551834 |
NA | XF2249 | deoxyxylulose-5-phosphate synthase | RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; | chromosome | CDS | 2139060 | 2013 | - | 0.527074 |
NA | XF0954 | 6,7-dimethyl-8-ribityllumazine synthase | RecName: Full=6,7-dimethyl-8-ribityllumazine synthase; Short=DMRL synthase; Short=LS; Short=Lumazine synthase; EC=2.5.1.78; | chromosome | CDS | 915898 | 465 | + | 0.554839 |
NA | XF1497 | 3'-phosphoadenosine 5'-phosphosulfate reductase | RecName: Full=Phosphoadenosine phosphosulfate reductase; EC=1.8.4.8; AltName: Full=3-phosphoadenylylsulfate reductase; AltName: Full=PAPS reductase, thioredoxin dependent; AltName: Full=PAPS sulfotransferase; AltName: Full=PAdoPS reductase; | chromosome | CDS | 1446343 | 714 | - | 0.551821 |
NA | XF1956 | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; | chromosome | CDS | 1864428 | 945 | + | 0.537566 |
NA | XF2206 | D-3-phosphoglycerate dehydrogenase | SubName: Full=D-3-phosphoglycerate dehydrogenase; | chromosome | CDS | 2092565 | 1242 | + | 0.544283 |
NA | XF1332 | uroporphyrinogen decarboxylase | RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD; Short=URO-D; EC=4.1.1.37; | chromosome | CDS | 1283186 | 1065 | - | 0.586854 |
NA | XF0230 | pantoate--beta-alanine ligase | RecName: Full=Pantothenate synthetase; Short=PS; EC=6.3.2.1; AltName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; | chromosome | CDS | 238826 | 846 | + | 0.531915 |
NA | XF1925 | nicotinate-mononucleotide pyrophosphorylase | SubName: Full=Nicotinate-mononucleotide pyrophosphorylase; | chromosome | CDS | 1829772 | 870 | + | 0.501149 |
NA | XF2604 | pterin-4-alpha-carbinolamine dehydratase | RecName: Full=Putative pterin-4-alpha-carbinolamine dehydratase; Short=PHS; EC=4.2.1.96; AltName: Full=4-alpha-hydroxy-tetrahydropterin dehydratase; AltName: Full=Pterin carbinolamine dehydratase; Short=PCD; | chromosome | CDS | 2484156 | 351 | + | 0.509971 |
NA | XF1797 | porphyrin biosynthesis protein | SubName: Full=Porphyrin biosynthesis protein; | chromosome | CDS | 1710469 | 1170 | - | 0.5 |
NA | XF0832 | siroheme synthase | RecName: Full=Siroheme synthase; Includes: RecName: Full=Uroporphyrinogen-III C-methyltransferase; Short=Urogen III methylase; EC=2.1.1.107; AltName: Full=SUMT; AltName: Full=Uroporphyrinogen III methylase; Short=UROM; Includes: RecName: Full=Precorrin-2 dehydrogenase; EC=1.3.1.76; Includes: RecName: Full=Sirohydrochlorin ferrochelatase; EC=4.99.1.4; | chromosome | CDS | 784408 | 1431 | - | 0.617051 |
NA | XF0595 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 573856 | 804 | - | 0.534826 |
NA | XF1748 | 5-amino-6-(5-phosphoribosylamino)uracilreductase | SubName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; | chromosome | CDS | 1666809 | 714 | - | 0.654062 |
NA | XF1916 | coenzyme F390 synthetase | SubName: Full=Coenzyme F390 synthetase; | chromosome | CDS | 1821986 | 1437 | + | 0.373695 |
NA | XF1934 | HetI protein | SubName: Full=HetI protein; | chromosome | CDS | 1837176 | 594 | + | 0.579125 |
NA | XF1097 | nicotinate phosphoribosyltransferase | RecName: Full=Nicotinate phosphoribosyltransferase; Short=NAPRTase; EC=6.3.4.21; | chromosome | CDS | 1049206 | 1185 | + | 0.508017 |
NA | XF0566 | ferrochelatase | RecName: Full=Ferrochelatase; EC=4.99.1.1; AltName: Full=Heme synthase; AltName: Full=Protoheme ferro-lyase; | chromosome | CDS | 551674 | 1014 | + | 0.555227 |
NA | XF1538 | ubiquinone biosynthesis protein | RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; EC=1.14.13.-; AltName: Full=5-demethoxyubiquinone hydroxylase; Short=DMQ hydroxylase; | chromosome | CDS | 1495531 | 480 | + | 0.539583 |
NA | XF1992 | riboflavin biosynthesis protein | RecName: Full=GTP cyclohydrolase-2; EC=3.5.4.25; AltName: Full=GTP cyclohydrolase II; | chromosome | CDS | 1905284 | 1197 | + | 0.570593 |
NA | XF0621 | phosphomethylpyrimidine kinase | SubName: Full=Phosphomethylpyrimidine kinase; | chromosome | CDS | 600068 | 825 | - | 0.544242 |
NA | XF0193 | 6-pyruvoyl tetrahydrobiopterin synthase | RecName: Full=6-carboxy-5,6,7,8-tetrahydropterin synthase; EC=4.-.-.-; | chromosome | CDS | 203079 | 372 | + | 0.486559 |
NA | XF0068 | hydroxybenzoate octaprenyltransferase | RecName: Full=4-hydroxybenzoate octaprenyltransferase; EC=2.5.1.-; AltName: Full=4-HB polyprenyltransferase; | chromosome | CDS | 61395 | 1002 | - | 0.52994 |
NA | XF0210 | anthranilate synthase component I | SubName: Full=Anthranilate synthase component I; | chromosome | CDS | 217584 | 1464 | + | 0.517076 |
NA | XF1923 | quinolinate synthetase A | RecName: Full=Quinolinate synthase A; EC=2.5.1.72; | chromosome | CDS | 1827173 | 1047 | + | 0.493792 |
NA | XF1357 | 8-amino-7-oxononanoate synthase | RecName: Full=8-amino-7-oxononanoate synthase; Short=AONS; EC=2.3.1.47; AltName: Full=7-keto-8-amino-pelargonic acid synthase; Short=7-KAP synthase; Short=KAPA synthase; AltName: Full=8-amino-7-ketopelargonate synthase; | chromosome | CDS | 1303957 | 1206 | - | 0.588723 |
NA | XF1999 | branched-chain amino acid aminotransferase | RecName: Full=Branched-chain-amino-acid aminotransferase; EC=2.6.1.42; | chromosome | CDS | 1912154 | 1089 | - | 0.550964 |
NA | XF1269 | lipoic acid synthetase | RecName: Full=Lipoyl synthase; EC=2.8.1.8; AltName: Full=Lip-syn; Short=LS; AltName: Full=Lipoate synthase; AltName: Full=Lipoic acid synthase; AltName: Full=Sulfur insertion protein LipA; | chromosome | CDS | 1225694 | 1122 | - | 0.532977 |
NA | XF2419 | riboflavin biosynthesis protein | SubName: Full=Riboflavin biosynthesis protein; | chromosome | CDS | 2300198 | 948 | - | 0.580169 |
NA | XF0064 | biotin synthase | RecName: Full=Biotin synthase; EC=2.8.1.6; | chromosome | CDS | 58103 | 1026 | + | 0.513645 |
NA | XF1763 | phage-related protein | SubName: Full=Phage-related protein; | chromosome | CDS | 1679422 | 843 | - | 0.673784 |
NA | XF0228 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase | SubName: Full=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; | chromosome | CDS | 237460 | 519 | + | 0.554913 |
NA | XF1507 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1457756 | 1152 | + | 0.528646 |
NA | XF0231 | aspartate 1-decarboxylase precursor | RecName: Full=Aspartate 1-decarboxylase; EC=4.1.1.11; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Precursor; | chromosome | CDS | 239706 | 429 | + | 0.494172 |
NA | XF0835 | 2-octaprenyl-6-methoxyphenol hydroxylase | SubName: Full=2-octaprenyl-6-methoxyphenol hydroxylase; | chromosome | CDS | 788343 | 1209 | - | 0.616212 |
NA | XF1545 | molybdopterin biosynthesis protein | SubName: Full=Molybdopterin biosynthesis protein; | chromosome | CDS | 1499121 | 831 | - | 0.494585 |
NA | XF1270 | lipoate biosynthesis protein B | RecName: Full=Octanoyltransferase; EC=2.3.1.181; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase; | chromosome | CDS | 1226852 | 690 | - | 0.581159 |
NA | XF0091 | dihydropteroate synthase | SubName: Full=Dihydropteroate synthase; | chromosome | CDS | 91047 | 897 | - | 0.54738 |
NA | XF0674 | anthranilate synthase component I | SubName: Full=Anthranilate synthase component I; | chromosome | CDS | 645178 | 1359 | + | 0.543046 |
NA | XF0782 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 734156 | 228 | + | 0.508772 |
NA | XF0953 | GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase | SubName: Full=GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; | chromosome | CDS | 914735 | 1134 | + | 0.573192 |
NA | XF1915 | anthranilate synthase component II | SubName: Full=Anthranilate synthase component II; | chromosome | CDS | 1821376 | 627 | + | 0.376396 |
NA | XF1391 | octaprenyl-diphosphate synthase | SubName: Full=Octaprenyl-diphosphate synthase; | chromosome | CDS | 1344942 | 999 | - | 0.544545 |
NA | XF0189 | adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase | SubName: Full=Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; | chromosome | CDS | 197922 | 1461 | + | 0.558522 |
NA | XF2471 | 3-demethylubiquinone-9 3-methyltransferase | RecName: Full=Ubiquinone biosynthesis O-methyltransferase; AltName: Full=2-polyprenyl-6-hydroxyphenol methylase; EC=2.1.1.222; AltName: Full=3-demethylubiquinone 3-O-methyltransferase; EC=2.1.1.64; | chromosome | CDS | 2354455 | 741 | - | 0.5722 |
NA | XF1500 | ATP sulfurylase, small subunit | RecName: Full=Sulfate adenylyltransferase subunit 2; EC=2.7.7.4; AltName: Full=ATP-sulfurylase small subunit; AltName: Full=Sulfate adenylate transferase; Short=SAT; | chromosome | CDS | 1450879 | 954 | + | 0.522013 |
NA | XF1627 | hydroxymethylbilane synthase | RecName: Full=Porphobilinogen deaminase; Short=PBG; EC=2.5.1.61; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; | chromosome | CDS | 1566917 | 918 | + | 0.562092 |
NA | XF1037 | adenosylhomocysteinase | RecName: Full=Adenosylhomocysteinase; EC=3.3.1.1; AltName: Full=S-adenosyl-L-homocysteine hydrolase; Short=AdoHcyase; | chromosome | CDS | 995383 | 1341 | - | 0.512304 |
NA | XF1924 | L-aspartate oxidase | RecName: Full=L-aspartate oxidase; Short=LASPO; EC=1.4.3.16; AltName: Full=Quinolinate synthase B; | chromosome | CDS | 1828232 | 1539 | + | 0.552956 |
NA | XF0229 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; EC=2.1.2.11; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT; | chromosome | CDS | 238089 | 741 | + | 0.557355 |
NA | XF2431 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | RecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; EC=1.5.1.5; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase; EC=3.5.4.9; | chromosome | CDS | 2314545 | 888 | - | 0.545045 |
NA | XF0075 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 75779 | 804 | + | 0.552239 |
NA | XF0149 | DNA/pantothenate metabolism flavoprotein | SubName: Full=DNA/pantothenate metabolism flavoprotein; | chromosome | CDS | 151968 | 1230 | + | 0.558537 |
NA | XF1428 | glutamate-cysteine ligase precursor | SubName: Full=Glutamate-cysteine ligase; | chromosome | CDS | 1376291 | 1365 | - | 0.569231 |
NA | XF2331 | dihydrofolate reductase type III | RecName: Full=Dihydrofolate reductase; EC=1.5.1.3; | chromosome | CDS | 2212193 | 567 | - | 0.530864 |
NA | XF1456 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase | SubName: Full=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; | chromosome | CDS | 1402660 | 630 | + | 0.515873 |
NA | XF1983 | GTP cyclohydrolase I | RecName: Full=GTP cyclohydrolase 1; EC=3.5.4.16; AltName: Full=GTP cyclohydrolase I; Short=GTP-CH-I; | chromosome | CDS | 1895679 | 621 | + | 0.516908 |
NA | XF1799 | uroporphyrinogen-III synthase | SubName: Full=Uroporphyrinogen-III synthase; | chromosome | CDS | 1712663 | 918 | - | 0.525054 |
NA | XF0392 | methionine adenosyltransferase | RecName: Full=S-adenosylmethionine synthase; Short=AdoMet synthase; EC=2.5.1.6; AltName: Full=MAT; AltName: Full=Methionine adenosyltransferase; | chromosome | CDS | 404470 | 1212 | + | 0.482673 |
NA | XF0378 | thiamin-phosphate pyrophosphorylase | RecName: Full=Thiamine-phosphate synthase; Short=TP synthase; Short=TPS; EC=2.5.1.3; AltName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP pyrophosphorylase; Short=TMP-PPase; | chromosome | CDS | 389990 | 705 | - | 0.51773 |
NA | XF2179 | conserved hypothetical protein | RecName: Full=Probable nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18; AltName: Full=Deamido-NAD(+) diphosphorylase; AltName: Full=Deamido-NAD(+) pyrophosphorylase; AltName: Full=Nicotinate mononucleotide adenylyltransferase; Short=NaMN adenylyltransferase; | chromosome | CDS | 2065988 | 669 | + | 0.573991 |
NA | XF0834 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 787165 | 1197 | - | 0.614035 |
NA | XF1946 | folylpolyglutamate synthase/dihydrofolate synthase | SubName: Full=Folylpolyglutamate synthase/dihydrofolate synthase; | chromosome | CDS | 1849155 | 1326 | + | 0.524133 |
NA | XF0211 | anthranilate synthase component II | SubName: Full=Anthranilate synthase component II; | chromosome | CDS | 219202 | 585 | + | 0.494017 |
NA | XF1798 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1711635 | 1032 | - | 0.533915 |
NA | XF0956 | thiamine-monophosphate kinase | RecName: Full=Thiamine-monophosphate kinase; Short=TMP kinase; Short=Thiamine-phosphate kinase; EC=2.7.4.16; | chromosome | CDS | 916923 | 975 | + | 0.562051 |
NA | XF1487 | ubiquinone/menaquinone transferase | RecName: Full=Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; EC=2.1.1.163; EC=2.1.1.201; AltName: Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; AltName: Full=Demethylmenaquinone methyltransferase; | chromosome | CDS | 1433938 | 762 | + | 0.532808 |
NA | XF2648 | glutamyl-tRNA reductase | RecName: Full=Glutamyl-tRNA reductase; Short=GluTR; EC=1.2.1.70; | chromosome | CDS | 2532951 | 1299 | + | 0.568899 |
NA | XF2306 | delta-aminolevulinic acid dehydratase | SubName: Full=Delta-aminolevulinic acid dehydratase; | chromosome | CDS | 2190566 | 1005 | - | 0.512438 |
NA | XF0783 | thiamine biosynthesis protein | RecName: Full=Thiazole synthase; EC=2.8.1.10; | chromosome | CDS | 734399 | 828 | + | 0.53744 |
NA | XF0839 | pyridoxal phosphate biosynthetic protein | RecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase; EC=1.1.1.262; AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase; | chromosome | CDS | 793815 | 993 | + | 0.588117 |
NA | XF0661 | geranyltranstransferase (farnesyl-diphosphate synthase) | SubName: Full=Geranyltranstransferase (Farnesyl-diphosphate synthase); | chromosome | CDS | 630040 | 876 | + | 0.590183 |
NA | XF0980 | lipopolysaccharide synthesis enzyme | RecName: Full=Phosphopantetheine adenylyltransferase; EC=2.7.7.3; AltName: Full=Dephospho-CoA pyrophosphorylase; AltName: Full=Pantetheine-phosphate adenylyltransferase; Short=PPAT; | chromosome | CDS | 939954 | 489 | + | 0.543967 |