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2024-05-03 20:07:02

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Nocardia farcinica IFM 10152, IFM 10152

Number of genes found: 173

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Nocardia farcinica IFM 10152, IFM 10152
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA nfa49300 hypothetical proteinchromosome CDS5150680 1470 - 0.637415
NA nfa50210 putative methyltransferasechromosome CDS5235798 765 - 0.712418
NA nfa31650 putative oxidoreductasechromosome CDS3360273 1047 - 0.723018
NA nfa54680 putative isochorismate synthasechromosome CDS5786936 1167 + 0.748072
NA nfa10900 hypothetical proteinchromosome CDS1207542 288 + 0.708333
NA nfa41890 putative cytidylyltransferasechromosome CDS4336156 486 - 0.652263
NA nfa25190 putative iron transporter ATP-binding proteinchromosome CDS2683849 840 - 0.715476
NA nfa1790 putative polyprenyltransferasechromosome CDS172203 1008 + 0.673611
NA nfa22280 putative phenol hydroxylasechromosome CDS2405177 1029 - 0.703596
NA nfa52200 putative monooxygenasechromosome CDS5513501 1134 - 0.746914
NA nfa50000 hypothetical proteinchromosome CDS5218232 678 - 0.713864
NA nfa11980 hypothetical proteinchromosome CDS1327302 927 + 0.7411
NA nfa45430 hypothetical proteinchromosome CDS4719973 1770 + 0.774576
NA nfa17390 putative polyprenyl synthasechromosome CDS1891162 1152 - 0.730035
NA nfa43050 hypothetical proteinchromosome CDS4462579 615 + 0.744715
NA nfa14210 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS1599746 1275 + 0.758431
NA nfa35380 putative rifampin monooxygenasechromosome CDS3747377 1422 + 0.732068
NA nfa34860 hypothetical proteinchromosome CDS3697080 936 + 0.737179
NA nfa49610 putative molybdopterin biosynthesis proteinchromosome CDS5176999 609 - 0.712644
NA nfa40880 putative cobyric acid synthasechromosome CDS4239984 1563 - 0.740243
NA nfa22030 polyprenyl synthasechromosome CDS2377074 1158 + 0.721071
NA nfa37030 putative amidotransferasechromosome CDS3918354 747 - 0.72423
NA nfa20620 hypothetical proteinchromosome CDS2243141 381 - 0.627297
NA nfa50340 putative methyltransferasechromosome CDS5288618 756 - 0.708995
NA nfa36380 putative monooxygenasechromosome CDS3849487 1224 - 0.715686
NA nfa13640 putative dehydrogenasechromosome CDS1529560 981 - 0.723751
NA nfa37950 putative aminotransferasechromosome CDS4015484 1224 - 0.716503
NA nfa19310 putative monooxygenasechromosome CDS2108588 1092 + 0.745421
NA nfa33050 putative monooxygenasechromosome CDS3505404 1137 + 0.706245
NA nfa33100 putative riboflavin-specific deaminasechromosome CDS3511485 687 + 0.685589
NA nfa21670 hypothetical proteinchromosome CDS2337574 417 - 0.71223
NA nfa16270 putative cobalamin biosynthesis proteinchromosome CDS1778692 918 + 0.761438
NA nfa37320 putative deaminase/reductasechromosome CDS3950414 780 + 0.734615
NA nfa2760 hypothetical proteinchromosome CDS284199 849 - 0.71967
NA nfa54340 putative monooxygenasechromosome CDS5753497 1347 - 0.7268
NA nfa31370 putative magnesium chelatasechromosome CDS3331762 3627 - 0.723739
NA nfa52340 hypothetical proteinchromosome CDS5530778 786 - 0.673028
NA nfa54040 putative oxidoreductasechromosome CDS5708818 777 + 0.712999
NA nfa4010 putative dihydroneopterin aldolasechromosome CDS421736 429 + 0.727273
NA nfa6190 putative hydroxybenzoate synthasechromosome CDS640308 1317 + 0.719818
NA nfa46130 putative S-adenosyl-L-homocysteine hydrolasechromosome CDS4801020 1485 - 0.666667
NA nfa11030 putative monooxygenasechromosome CDS1217941 1206 + 0.733831
NA nfa13760 hypothetical proteinchromosome CDS1541723 669 + 0.654709
NA nfa51220 putative polyprenyl diphosphate synthasechromosome CDS5423497 1038 - 0.705202
NA nfa33930 putative ATP sulfurylase small subunitchromosome CDS3594849 927 - 0.641855
NA nfa14660 hypothetical proteinchromosome CDS1647138 573 - 0.677138
NA nfa49540 hypothetical proteinchromosome CDS5172591 603 + 0.762852
NA nfa32020 hypothetical proteinchromosome CDS3404779 678 + 0.674041
NA nfa44000 putative polyprenyl synthasechromosome CDS4560086 1110 - 0.754054
NA pnf1220 hypothetical proteinpNF1 CDS20286 708 + 0.659605
NA nfa41580 hypothetical proteinchromosome CDS4304799 555 - 0.69009
NA nfa21970 putative oxidoreductasechromosome CDS2370467 1581 + 0.72549
NA nfa3690 hypothetical proteinchromosome CDS384454 552 - 0.666667
NA nfa37050 putative pyridoxine biosynthesis proteinchromosome CDS3919966 921 - 0.688382
NA nfa18990 putative dephospho-CoA kinasechromosome CDS2073320 1152 + 0.74566
NA nfa12530 hypothetical proteinchromosome CDS1394422 549 - 0.714025
NA nfa6600 putative pyridoxamine 5'-phosphate oxidasechromosome CDS680889 825 - 0.718788
NA nfa47520 hypothetical proteinchromosome CDS4962947 2598 - 0.715935
NA nfa43230 putative 2-amino-3-ketobutyrate CoA ligasechromosome CDS4481163 1422 - 0.730661
NA nfa27510 putative pterin-4-alpha-carbinolamine dehydratasechromosome CDS2914005 342 + 0.643275
NA nfa33110 putative pyrimidine deaminasechromosome CDS3512168 450 + 0.691111
NA nfa21660 putative phenylacetate-CoA synthetasechromosome CDS2336202 1311 + 0.695652
NA nfa52160 hypothetical proteinchromosome CDS5510386 699 + 0.708154
NA nfa47610 putative molybdopterin biosynthesis proteinchromosome CDS4973559 288 + 0.708333
NA nfa3160 hypothetical proteinchromosome CDS332898 573 + 0.705061
NA nfa37370 putative protoporphyrinogen oxidasechromosome CDS3955521 1347 - 0.765405
NA nfa6270 hypothetical proteinchromosome CDS648562 555 + 0.702703
NA nfa29130 putative GTP cyclohydrolase IIchromosome CDS3096353 771 - 0.745785
NA nfa53510 hypothetical proteinchromosome CDS5657664 576 - 0.666667
NA nfa40800 hypothetical proteinchromosome CDS4231075 348 - 0.793103
NA nfa20330 hypothetical proteinchromosome CDS2214318 567 + 0.710758
NA nfa16970 putative branched-chain amino acid aminotransferasechromosome CDS1848993 1101 + 0.71208
NA nfa40830 putative magnesium chelatase subunitchromosome CDS4233874 1914 - 0.76489
NA nfa45160 hypothetical proteinchromosome CDS4683969 741 - 0.74224
NA nfa36760 hypothetical proteinchromosome CDS3893549 618 - 0.739482
NA nfa49170 hypothetical proteinchromosome CDS5134640 2142 - 0.726424
NA nfa44120 putative magnesium chelatasechromosome CDS4571757 1398 - 0.724607
NA nfa18230 putative ABC transporter ATP-binding proteinchromosome CDS1995198 801 - 0.746567
NA nfa12810 putative aminotransferasechromosome CDS1434260 1290 + 0.687597
NA nfa20780 putative monooxygenasechromosome CDS2251558 1191 - 0.744752
NA nfa27810 putative monooxygenasechromosome CDS2951230 1902 + 0.698212
NA nfa5840 putative aminotransferasechromosome CDS604285 918 + 0.6939
NA nfa27440 hypothetical proteinchromosome CDS2909184 738 - 0.669377
NA nfa3220 putative branched-chain amino acid aminotransferasechromosome CDS337038 915 + 0.693989
NA nfa47820 hypothetical proteinchromosome CDS4992430 564 - 0.657801
NA nfa780 putative reductase/deaminasechromosome CDS59452 1122 + 0.736185
NA nfa43150 hypothetical proteinchromosome CDS4473251 243 - 0.711934
NA nfa32760 putative monooxygenasechromosome CDS3474611 1449 - 0.732919
NA nfa54030 putative oxidoreductasechromosome CDS5707617 1158 + 0.658895
NA nfa20240 putative thiamin biosynthesis proteinchromosome CDS2205525 1233 + 0.725061
NA nfa30580 putative phenol hydroxylasechromosome CDS3244171 1026 - 0.726121
NA nfa41820 hypothetical proteinchromosome CDS4331332 582 - 0.675258
NA nfa54050 putative flavohemoproteinchromosome CDS5709599 1173 - 0.676044
NA nfa14400 putative aminotransferasechromosome CDS1620413 2622 + 0.684211
bioA nfa18180 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS1984692 1284 + 0.720405
bioB nfa18320 putative biotin synthasechromosome CDS2004564 1014 + 0.693294
bioD nfa18200 putative dethiobiotin synthetasechromosome CDS1987153 732 + 0.736339
bioF nfa18190 putative 8-amino-7-oxononanoate synthasechromosome CDS1986002 1155 + 0.751515
birA nfa9950 putative biotin-[acetyl-CoA carboxylase] holoenzyme synthetase/biotin operon repressorchromosome CDS1102153 822 + 0.740876
btuR nfa40820 putative cob(I)alamin adenolsyltransferasechromosome CDS4232923 615 - 0.700813
coaA nfa48170 putative pantothenate kinasechromosome CDS5031554 933 + 0.640943
cobB nfa40810 putative cobyrinic acid a,c-diamide synthasechromosome CDS4231502 1425 - 0.759298
cobH nfa31510 putative precorrin 8X methylmutasechromosome CDS3346279 636 + 0.740566
cobIJ nfa31520 putative precorrin 2 methyltransferase/precorrin 3B methyltransferasechromosome CDS3346911 1611 + 0.739292
cobK nfa31540 putative precorrin 6X reductasechromosome CDS3349085 663 - 0.770739
cobL nfa31560 putative precorrin 6B methyltransferasechromosome CDS3350507 1248 - 0.755609
cobS nfa16990 putative cobalamin 5'-phosphate synthasechromosome CDS1850966 780 - 0.774359
cobT nfa17000 putativenicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferasechromosome CDS1851742 1080 - 0.751852
cobU nfa17010 putative cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome CDS1852978 531 + 0.753296
cysD nfa14170 putative sulfate adenylyltransferase subunit 2chromosome CDS1595481 945 - 0.698413
cysD2 nfa24550 putative sulfate adenylyltransferase subunit 2chromosome CDS2617966 933 - 0.693462
cysG nfa40770 putative uroporphyrinogen III methylasechromosome CDS4227230 1272 - 0.748428
cysH nfa14180 putative phosphoadenosine phosphosulfate reductasechromosome CDS1596422 720 - 0.690278
dfp nfa36140 putative pantothenate metabolism flavoproteinchromosome CDS3826109 1227 - 0.720456
dfrA nfa50230 putative dihydrofolate reductasechromosome CDS5237421 516 + 0.703488
dxs nfa37410 putative 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS3960138 1896 - 0.717827
folC nfa13490 putative folylpolyglutamate synthetasechromosome CDS1513039 1482 + 0.719298
folD nfa34300 putative methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolasechromosome CDS3634547 852 - 0.730047
folE nfa3990 putative GTP cyclohydrolase Ichromosome CDS420166 687 + 0.713246
folE2 nfa31470 putative GTP cyclohydrolase Ichromosome CDS3343730 594 - 0.698653
folK nfa4020 putative2-amino-4-hydroxy-6-hydroxymethyldihydro pteridinepyrophosphokinasechromosome CDS422161 546 + 0.739927
folP nfa4000 putative dihydropteroate synthasechromosome CDS420849 891 + 0.740741
folP2 nfa47370 putative dihydropteroate synthasechromosome CDS4947722 942 - 0.721868
hemA nfa51700 putative glutamyl-tRNA reductasechromosome CDS5468598 1434 - 0.730823
hemB nfa51660 putative 5-aminolevulinic acid dehydratasechromosome CDS5464402 978 - 0.710634
hemC nfa51690 putative porphobilinogen deaminasechromosome CDS5467534 1041 - 0.755043
hemDX nfa51680 putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthasechromosome CDS5465975 1563 - 0.727447
hemE nfa37380 putative uroporphyrinogen decarboxylasechromosome CDS3957074 1065 - 0.721127
hemH nfa34750 putative ferrochelatasechromosome CDS3684375 1059 - 0.729934
hemL nfa51600 putative glutamate-1-semialdehyde aminotransferasechromosome CDS5460382 1338 - 0.731689
ilvB nfa42320 putative acetolactate synthase large subunitchromosome CDS4378985 1944 - 0.70216
ilvB2 nfa30060 putative acetolactate synthase large subunitchromosome CDS3186911 1866 - 0.735798
ilvB3 nfa50590 putative acetolactate synthase large subunitchromosome CDS5315163 1677 + 0.710197
ilvB4 nfa55170 putative acetolactate synthase large subunitchromosome CDS5843562 1791 + 0.738693
ilvC nfa42300 putative ketol-acid reductoisomerasechromosome CDS4377375 1014 - 0.663708
lipA nfa16860 putative lipoic acid synthetasechromosome CDS1838121 1059 - 0.707271
lipB nfa16870 putative lipoate-protein ligasechromosome CDS1839176 753 - 0.710491
menA nfa51470 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS5450656 870 + 0.71954
menB nfa51380 putative dihydroxynaphtoic acid synthetasechromosome CDS5440000 894 + 0.685682
menD nfa51330 putative 2-oxoglutarate decarboxylase/2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthasechromosome CDS5435269 1638 - 0.741758
menG nfa1040 putativeS-adenosylmethionine:2-demethylmenaquino nemethyltransferasechromosome CDS97629 498 + 0.698795
metK nfa36130 putative S-adenosylmethionine synthetasechromosome CDS3824678 1215 - 0.69465
moaA nfa43160 putative molybdopterin biosynthesis proteinchromosome CDS4473486 1044 - 0.722222
moaC nfa43180 putative molybdopterin biosynthesis proteinchromosome CDS4475917 1050 + 0.740952
moaE nfa43190 putative molybdopterin biosynthesis proteinchromosome CDS4476956 438 + 0.721461
moeA nfa43170 putative molybdopterin biosynthesis proteinchromosome CDS4474668 1203 + 0.746467
moeA2 nfa49520 putative molybdopterin biosynthesis proteinchromosome CDS5170198 1257 - 0.724741
nadA nfa18370 putative quinolinate synthetasechromosome CDS2007904 1044 + 0.693487
nadB nfa18380 putative L-aspartate oxidasechromosome CDS2008981 1677 + 0.763864
nadC nfa18390 putative quinolinate phosphoribosyltransferasechromosome CDS2010687 861 + 0.722416
nadE nfa43120 putative NAD synthetasechromosome CDS4470360 825 + 0.706667
pabA nfa770 putative para-aminobenzoate synthasechromosome CDS58811 645 + 0.702326
pabB nfa16010 putative para-aminobenzoate synthasechromosome CDS1752087 2073 - 0.720695
panB nfa16500 putative 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS1799649 852 - 0.710094
panC nfa4060 putative pantothenate synthetasechromosome CDS425973 957 + 0.723093
panD nfa4070 putative aspartate 1-decarboxylasechromosome CDS426946 420 + 0.67381
pncB nfa10850 putative nicotinate phosphoribosyltransferasechromosome CDS1203507 1317 - 0.725892
poxB nfa1510 putative pyruvate oxidasechromosome CDS139777 1782 - 0.690797
ribBA nfa36000 putative 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase IIchromosome CDS3811546 1245 - 0.699598
ribE nfa36010 putative riboflavin synthase alpha subunitchromosome CDS3812958 624 - 0.695513
ribF nfa38900 putative riboflavin kinasechromosome CDS4103286 960 - 0.704167
ribH nfa35990 putative riboflavin synthase beta subunitchromosome CDS3811038 480 - 0.741667
ribH2 nfa16640 putative riboflavin synthase beta subunitchromosome CDS1815361 465 - 0.705376
serA nfa42210 putative D-3-phosphoglycerate dehydrogenasechromosome CDS4371255 1599 - 0.713571
serC nfa6550 putative phosphoserine aminotransferasechromosome CDS676624 1131 - 0.693192
thiC nfa53160 putative thiamine biosynthesis proteinchromosome CDS5617123 1644 + 0.681874
thiD nfa53190 putative phosphomethylpyrimidine kinasechromosome CDS5620987 846 + 0.741135
thiE nfa53400 putative thiamine monophosphate synthasechromosome CDS5644849 699 + 0.725322
thiG nfa53370 putative thiamin-thiazole moiety synthesischromosome CDS5642700 771 - 0.728923
thiL nfa42010 putative thiamin-monophosphate kinasechromosome CDS4350653 1002 - 0.756487
thiS nfa53380 putative sulfur transfer proteinchromosome CDS5643463 219 - 0.703196
trpE nfa18580 putative anthranilate synthase component Ichromosome CDS2028357 1551 + 0.716957
ubiE nfa51290 putative ubiquinone/menaquinone methyltransferasechromosome CDS5429102 714 + 0.703081