Gene list
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COG category: Coenzyme transport and metabolism
Organism: Yersinia pestis CO92, CO92
Number of genes found: 140
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pestis CO92, CO92 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
YPO0082 | possible transferase | chromosome | CDS | 93119 | 714 | - | 0.540616 | ||
YPO0286 | putative coproporphyrinogen III oxidase | chromosome | CDS | 286662 | 1314 | - | 0.509893 | ||
YPO0293 | conserved hypothetical protein | chromosome | CDS | 294300 | 1062 | - | 0.490584 | ||
YPO0522 | thiamine-binding periplasmic protein | chromosome | CDS | 565994 | 993 | - | 0.498489 | ||
YPO0913 | putative 5-formyltetrahydrofolate cyclo-ligase-family protein | chromosome | CDS | 1002301 | 597 | + | 0.517588 | ||
YPO0946 | putative oxygen-independent coproporphyrinogen III oxidase | chromosome | CDS | 1036159 | 1131 | + | 0.489832 | ||
YPO1008 | putative integral membrane efflux protein | chromosome | CDS | 1137111 | 1557 | + | 0.48298 | ||
YPO1026 | conserved hypothetical protein | chromosome | CDS | 1166617 | 828 | + | 0.4843 | ||
YPO1083 | putative permease | chromosome | CDS | 1230242 | 1485 | - | 0.486869 | ||
YPO1288 | putative D-isomer specific 2-hydroxyacid dehydrogenase family protein | chromosome | CDS | 1445988 | 966 | - | 0.600414 | ||
YPO1312 | putative siderophore ABC transporter, ATP-binding subunit | chromosome | CDS | 1474955 | 789 | + | 0.504436 | ||
YPO1345 | putative transport ATP-binding protein | chromosome | CDS | 1509457 | 786 | + | 0.521628 | ||
YPO1533 | putative iron-siderophore transport system, ATP-binding component | chromosome | CDS | 1744711 | 849 | - | 0.485277 | ||
YPO1603 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1826766 | 807 | + | 0.488228 | ||
YPO1773 | para-aminobenzoate synthase component I | chromosome | CDS | 2019159 | 1377 | - | 0.511256 | ||
YPO1976 | hypothetical protein | chromosome | CDS | 2243988 | 1977 | - | 0.468892 | ||
YPO1981 | putative coenzyme synthetase | chromosome | CDS | 2249435 | 1287 | + | 0.520591 | ||
YPO2293 | putative acetolactate synthase large subunit | chromosome | CDS | 2578383 | 1683 | + | 0.498515 | ||
YPO2536 | putative D-isomer specific 2-hydroxyacid dehydrogenase family protein | chromosome | CDS | 2846500 | 951 | - | 0.480547 | ||
YPO3373 | putative 6-pyruvoyl tetrahydrobiopterin synthase family protein | chromosome | CDS | 3762094 | 360 | + | 0.475 | ||
YPO3430 | conserved hypothetical protein | chromosome | CDS | 3834478 | 621 | + | 0.470209 | ||
YPO3518 | putative exported protein | chromosome | CDS | 3927040 | 264 | + | 0.409091 | ||
YPO3769 | conserved hypothetical protein | chromosome | CDS | 4233103 | 1497 | - | 0.485638 | ||
YPO3910 | putative vitamin B12 receptor protein | chromosome | CDS | 4391024 | 1878 | - | 0.468584 | ||
YPO4078 | putative D-isomer specific 2-hydroxyacid dehydrogenase | chromosome | CDS | 4597877 | 981 | + | 0.511723 | ||
apbA | 2-dehydropantoate 2-reductase | chromosome | CDS | 3535121 | 912 | + | 0.464912 | ||
apbE | thiamine biosynthesis lipoprotein | chromosome | CDS | 3599594 | 1023 | - | 0.479961 | ||
bioA | adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase | chromosome | CDS | 1295706 | 1269 | - | 0.531127 | ||
bioB | biotin synthase | chromosome | CDS | 1297073 | 1038 | + | 0.510597 | ||
bioD | putative dethiobiotin synthetase | chromosome | CDS | 2551894 | 669 | + | 0.431988 | ||
bioD | dethiobiotin synthetase | chromosome | CDS | 1300041 | 723 | + | 0.542185 | ||
bioF | 8-amino-7-oxononanoate synthase | chromosome | CDS | 1298110 | 1152 | + | 0.580729 | ||
birA | bifunctional protein BirA | chromosome | CDS | 4215668 | 960 | - | 0.40625 | ||
btuC | puative vitamin B12 transport system permease protein | chromosome | CDS | 2725750 | 1008 | - | 0.484127 | ||
btuD | putative vitamin B12 transport ATP-binding protein | chromosome | CDS | 2724343 | 762 | - | 0.469816 | ||
btuR | cob(I)alamin adenosyltransferase | chromosome | CDS | 2487649 | 591 | - | 0.497462 | ||
coaA | pantothenate kinase | chromosome | CDS | 4214683 | 951 | + | 0.398528 | ||
coaD | phosphopantetheine adenylyltransferase | chromosome | CDS | 63993 | 480 | - | 0.4625 | ||
cysD | sulfate adenylyltransferase subunit 2 | chromosome | CDS | 3753475 | 909 | - | 0.491749 | ||
cysG | siroheme synthase | chromosome | CDS | 3754394 | 1419 | - | 0.55673 | ||
cysG | siroheme synthase | chromosome | CDS | 172153 | 1413 | - | 0.530078 | ||
ddhD | cdp-6-deoxy-delta-3,4-glucoseen reductase | chromosome | CDS | 3472384 | 990 | - | 0.374747 | ||
dfp | DNA/pantothenate metabolism flavoprotein | chromosome | CDS | 60338 | 1218 | - | 0.481117 | ||
dxs | 1-deoxy-D-xylulose 5-phosphate synthase | chromosome | CDS | 3539789 | 1860 | + | 0.489247 | ||
fadI | NAD(P)H-flavin reductase | chromosome | CDS | 4232347 | 702 | - | 0.487179 | ||
fhuC | ferrichrome transport ATP-binding protein FhuC | chromosome | CDS | 3787285 | 795 | - | 0.543396 | ||
folA | dihydrofolate reductase | chromosome | CDS | 519099 | 483 | + | 0.486542 | ||
folB | putative dihydroneopterin aldolase | chromosome | CDS | 705730 | 360 | + | 0.5 | ||
folC | putative FolC bifunctional protein | chromosome | CDS | 3103256 | 1305 | + | 0.531034 | ||
folD | putative FolD bifunctional protein | chromosome | CDS | 3151967 | 867 | + | 0.514418 | ||
folE | GTP cyclohydrolase I | chromosome | CDS | 1708674 | 663 | + | 0.453997 | ||
folK | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase | chromosome | CDS | 3798453 | 480 | + | 0.529167 | ||
folP | dihydropteroate synthase | chromosome | CDS | 3911226 | 834 | - | 0.476019 | ||
gshA | glutamate--cysteine ligase | chromosome | CDS | 3679377 | 1560 | - | 0.482051 | ||
gshB | glutathione synthetase | chromosome | CDS | 1027196 | 960 | + | 0.491667 | ||
hemA | glutamyl-tRNA reductase | chromosome | CDS | 2287940 | 1263 | + | 0.502771 | ||
hemB | delta-aminolevulinic acid dehydratase | chromosome | CDS | 4235445 | 1023 | - | 0.477028 | ||
hemC | porphobilinogen deaminase | chromosome | CDS | 4319664 | 942 | + | 0.547771 | ||
hemD | uroporphyrinogen-III synthase | chromosome | CDS | 4320602 | 750 | + | 0.512 | ||
hemE | uroporphyrinogen decarboxylase | chromosome | CDS | 4186774 | 1068 | - | 0.512172 | ||
hemF | coproporphyrinogen III oxidase, aerobic HemF | chromosome | CDS | 3385073 | 930 | + | 0.533333 | ||
hemG | protoporphyrinogen oxidase | chromosome | CDS | 4223798 | 534 | - | 0.428839 | ||
hemH | ferrochelatase | chromosome | CDS | 3473971 | 963 | - | 0.457944 | ||
hemL | glutamate-1-semialdehyde 2,1-aminomutase | chromosome | CDS | 3782549 | 1281 | + | 0.508977 | ||
hemN | oxygen-independent coproporphyrinogen III oxidase | chromosome | CDS | 28982 | 1374 | + | 0.477438 | ||
hemX | putative uroporphyrin-III C-methyltransferase | chromosome | CDS | 4321382 | 1125 | + | 0.506667 | ||
hemY | putative protoheme IX biogenesis protein | chromosome | CDS | 4322509 | 1221 | + | 0.525798 | ||
ilvC | ketol-acid reductoisomerase | chromosome | CDS | 4362378 | 1479 | - | 0.503043 | ||
ilvE | branched-chain amino acid aminotransferase | chromosome | CDS | 4372226 | 927 | - | 0.515642 | ||
ilvG | acetolactate synthase isozyme II large subunit | chromosome | CDS | 4373429 | 1647 | - | 0.532483 | ||
ilvI | acetolactate synthase isozyme III large subunit | chromosome | CDS | 584017 | 1728 | + | 0.497685 | ||
ispA | geranyltranstransferase | chromosome | CDS | 3538713 | 921 | + | 0.505972 | ||
ispB | octaprenyl-diphosphate synthase | chromosome | CDS | 3922471 | 972 | + | 0.489712 | ||
kbl | 2-amino-3-ketobutyrate coenzyme A ligase | chromosome | CDS | 70187 | 1212 | + | 0.50165 | ||
ldhA | D-lactate dehydrogenase | chromosome | CDS | 2620043 | 993 | + | 0.460222 | ||
lipA | lipoic acid synthetase | chromosome | CDS | 2919074 | 966 | - | 0.501035 | ||
lipB | lipoate-protein ligase B | chromosome | CDS | 2920232 | 702 | - | 0.490029 | ||
lplA | putative lipoate-protein ligase A | chromosome | CDS | 2714697 | 1017 | - | 0.450344 | ||
menA | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | chromosome | CDS | 112060 | 918 | - | 0.490196 | ||
menB | naphthoate synthase | chromosome | CDS | 2834267 | 858 | - | 0.519814 | ||
menC | putative O-succinylbenzoate-CoA synthase | chromosome | CDS | 2833296 | 972 | - | 0.569959 | ||
menD | menaquinone biosynthesis protein | chromosome | CDS | 2835953 | 1704 | - | 0.569836 | ||
menF | menaquinone-specific isochorismate synthase | chromosome | CDS | 2837884 | 1368 | - | 0.512427 | ||
menG | S-adenosylmethionine:2-demethylmenaquinonemethyl transferase | chromosome | CDS | 111433 | 486 | - | 0.475309 | ||
metK | S-adenosylmethionine synthetase | chromosome | CDS | 1023523 | 1155 | + | 0.497835 | ||
moaA | molybdenum cofactor biosynthesis protein A | chromosome | CDS | 1306853 | 981 | + | 0.492355 | ||
moaC | molybdenum cofactor biosynthesis protein C | chromosome | CDS | 1307934 | 480 | + | 0.533333 | ||
moaD | molybdopterin [mpt] converting factor, subunit 1 | chromosome | CDS | 1308410 | 246 | + | 0.528455 | ||
moaE | molybdopterin [mpt] converting factor, subunit 2 | chromosome | CDS | 1308655 | 456 | + | 0.541667 | ||
mobA | molybdopterin-guanine dinucleotide biosynthesis protein A | chromosome | CDS | 19702 | 642 | - | 0.433022 | ||
mobB | probable molybdopterin-guanine dinucleotide biosynthesis protein B | chromosome | CDS | 19172 | 531 | - | 0.40678 | ||
moeA | molybdopterin biosynthesis protein | chromosome | CDS | 1696082 | 1275 | - | 0.499608 | ||
moeB | molybdopterin biosynthesis protein | chromosome | CDS | 1695310 | 768 | - | 0.497396 | ||
mogA | molybdopterin biosynthesis protein | chromosome | CDS | 491445 | 588 | + | 0.45068 | ||
nadA | quinolinate synthetase A | chromosome | CDS | 1273693 | 1062 | + | 0.507533 | ||
nadB | L-aspartate oxidase | chromosome | CDS | 3037547 | 1638 | - | 0.484127 | ||
nadC | nicotinate-nucleotide pyrophosphorylase [carboxylating] | chromosome | CDS | 3828410 | 909 | + | 0.488449 | ||
nadD | putative nicotinate-nucleotide adenylyltransferase | chromosome | CDS | 2928592 | 663 | - | 0.490196 | ||
nadR | transcriptional regulator NadR | chromosome | CDS | 465364 | 1272 | + | 0.488208 | ||
pabA | para-aminobenzoate synthase glutamine amidotransferase component II | chromosome | CDS | 188810 | 576 | + | 0.520833 | ||
panB | 3-methyl-2-oxobutanoate hydroxymethyltransferase | chromosome | CDS | 3799198 | 801 | + | 0.521848 | ||
panC | pantoate--beta-alanine ligase | chromosome | CDS | 3800086 | 855 | + | 0.530994 | ||
panD | aspartate 1-decarboxylase precursor | chromosome | CDS | 3801351 | 381 | + | 0.47769 | ||
panF | sodium/pantothenate symporter | chromosome | CDS | 4075981 | 1455 | - | 0.527835 | ||
pdxA | pyridoxal phosphate biosynthetic protein | chromosome | CDS | 523776 | 996 | - | 0.501004 | ||
pdxB | putative D-isomer specific 2-hydroxyacid dehydrogenase | chromosome | CDS | 3097144 | 1128 | + | 0.54078 | ||
pdxH | pyridoxamine 5'-phosphate oxidase | chromosome | CDS | 2663279 | 654 | - | 0.490826 | ||
pdxJ | pyridoxal phosphate biosynthetic protein PdxJ | chromosome | CDS | 3274232 | 732 | - | 0.495902 | ||
pdxY | pyridoxamine kinase | chromosome | CDS | 2660808 | 861 | - | 0.502904 | ||
pncB | putative nicotinate phosphoribosyltransferase | chromosome | CDS | 1602424 | 1206 | - | 0.472637 | ||
pnuC | intergral membrane NMN transport protein PnuC | chromosome | CDS | 1274876 | 726 | + | 0.461433 | ||
poxB | pyruvate dehydrogenase [cytochrome] | chromosome | CDS | 1521957 | 1722 | - | 0.522648 | ||
ribA | GTP cyclohydrolase II | chromosome | CDS | 2499403 | 591 | - | 0.470389 | ||
ribB | 3,4-dihydroxy-2-butanone 4-phosphate synthase | chromosome | CDS | 718102 | 654 | + | 0.524465 | ||
ribD | riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reducta | chromosome | CDS | 3545250 | 1110 | - | 0.527928 | ||
ribE | riboflavin synthase alpha chain | chromosome | CDS | 2686255 | 657 | - | 0.450533 | ||
ribF | riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase) | chromosome | CDS | 503765 | 939 | + | 0.500533 | ||
ribH | 6,7-dimethyl-8-ribityllumazine synthase | chromosome | CDS | 3544644 | 471 | - | 0.475584 | ||
serA | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 1003162 | 1242 | - | 0.488728 | ||
serC | phosphoserine aminotransferase | chromosome | CDS | 1568497 | 1086 | + | 0.474217 | ||
thiC | thiamine biosynthesis protein ThiC | chromosome | CDS | 4190602 | 2046 | + | 0.518084 | ||
thiD | putative phosphomethylpyrimidine kinase | chromosome | CDS | 3196123 | 801 | - | 0.556804 | ||
thiE | thiamine-phosphate pyrophosphorylase | chromosome | CDS | 4192661 | 648 | + | 0.533951 | ||
thiF | thiamine biosynthesis protein ThiF | chromosome | CDS | 4193298 | 798 | + | 0.5401 | ||
thiG | thiamine biosynthesis protein ThiG | chromosome | CDS | 4194123 | 1002 | + | 0.535928 | ||
thiH | thiamine biosynthesis protein ThiH | chromosome | CDS | 4195117 | 1131 | + | 0.501326 | ||
thiL | thiamine-monophosphate kinase | chromosome | CDS | 3542977 | 990 | - | 0.489899 | ||
thiQ | thiamine transport ATP-binding protein | chromosome | CDS | 563714 | 684 | - | 0.548246 | ||
trpE | anthranilate synthase component I | chromosome | CDS | 2482592 | 1566 | - | 0.505109 | ||
trpG | anthranilate synthase component II | chromosome | CDS | 2482014 | 579 | - | 0.519862 | ||
ubiA | 4-hydroxybenzoate octaprenyltransferase | chromosome | CDS | 317386 | 867 | + | 0.484429 | ||
ubiC | putative chorismate--pyruvate lyase | chromosome | CDS | 316696 | 525 | + | 0.508571 | ||
ubiE | ubiquinone/menaquinone biosynthesis methyltransferase | chromosome | CDS | 4243465 | 756 | - | 0.448413 | ||
ubiF | putative2-octaprenyl-3-methyl-6-methoxy-1,4-benz oquinolhydroxylase | chromosome | CDS | 2944454 | 1182 | + | 0.534687 | ||
ubiG | 3-demethylubiquinone-9 3-methyltransferase | chromosome | CDS | 1369739 | 729 | - | 0.499314 | ||
ubiH | 2-octaprenyl-6-methoxyphenol hydroxylase | chromosome | CDS | 998045 | 1179 | - | 0.550466 | ||
ubiX | probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | chromosome | CDS | 3108000 | 573 | + | 0.467714 | ||
visC | putative monooxygenase | chromosome | CDS | 996652 | 1221 | - | 0.54955 | ||
wbyH | putative exported protein | chromosome | CDS | 3466984 | 1284 | - | 0.352804 | ||
ybtS | putative salicylate synthetase | chromosome | CDS | 2168365 | 1305 | + | 0.55249 |