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2024-05-08 08:04:09

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Yersinia pestis CO92, CO92

Number of genes found: 140

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Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
YPO0082 possible transferasechromosome CDS93119 714 - 0.540616
YPO0286 putative coproporphyrinogen III oxidasechromosome CDS286662 1314 - 0.509893
YPO0293 conserved hypothetical proteinchromosome CDS294300 1062 - 0.490584
YPO0522 thiamine-binding periplasmic proteinchromosome CDS565994 993 - 0.498489
YPO0913 putative 5-formyltetrahydrofolate cyclo-ligase-family proteinchromosome CDS1002301 597 + 0.517588
YPO0946 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS1036159 1131 + 0.489832
YPO1008 putative integral membrane efflux proteinchromosome CDS1137111 1557 + 0.48298
YPO1026 conserved hypothetical proteinchromosome CDS1166617 828 + 0.4843
YPO1083 putative permeasechromosome CDS1230242 1485 - 0.486869
YPO1288 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1445988 966 - 0.600414
YPO1312 putative siderophore ABC transporter, ATP-binding subunitchromosome CDS1474955 789 + 0.504436
YPO1345 putative transport ATP-binding proteinchromosome CDS1509457 786 + 0.521628
YPO1533 putative iron-siderophore transport system, ATP-binding componentchromosome CDS1744711 849 - 0.485277
YPO1603 4-amino-4-deoxychorismate lyasechromosome CDS1826766 807 + 0.488228
YPO1773 para-aminobenzoate synthase component Ichromosome CDS2019159 1377 - 0.511256
YPO1976 hypothetical proteinchromosome CDS2243988 1977 - 0.468892
YPO1981 putative coenzyme synthetasechromosome CDS2249435 1287 + 0.520591
YPO2293 putative acetolactate synthase large subunitchromosome CDS2578383 1683 + 0.498515
YPO2536 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2846500 951 - 0.480547
YPO3373 putative 6-pyruvoyl tetrahydrobiopterin synthase family proteinchromosome CDS3762094 360 + 0.475
YPO3430 conserved hypothetical proteinchromosome CDS3834478 621 + 0.470209
YPO3518 putative exported proteinchromosome CDS3927040 264 + 0.409091
YPO3769 conserved hypothetical proteinchromosome CDS4233103 1497 - 0.485638
YPO3910 putative vitamin B12 receptor proteinchromosome CDS4391024 1878 - 0.468584
YPO4078 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS4597877 981 + 0.511723
apbA 2-dehydropantoate 2-reductasechromosome CDS3535121 912 + 0.464912
apbE thiamine biosynthesis lipoproteinchromosome CDS3599594 1023 - 0.479961
bioA adenosylmethionine-8-amino-7-oxononanoateaminotr ansferasechromosome CDS1295706 1269 - 0.531127
bioB biotin synthasechromosome CDS1297073 1038 + 0.510597
bioD dethiobiotin synthetasechromosome CDS1300041 723 + 0.542185
bioD putative dethiobiotin synthetasechromosome CDS2551894 669 + 0.431988
bioF 8-amino-7-oxononanoate synthasechromosome CDS1298110 1152 + 0.580729
birA bifunctional protein BirAchromosome CDS4215668 960 - 0.40625
btuC puative vitamin B12 transport system permease proteinchromosome CDS2725750 1008 - 0.484127
btuD putative vitamin B12 transport ATP-binding proteinchromosome CDS2724343 762 - 0.469816
btuR cob(I)alamin adenosyltransferasechromosome CDS2487649 591 - 0.497462
coaA pantothenate kinasechromosome CDS4214683 951 + 0.398528
coaD phosphopantetheine adenylyltransferasechromosome CDS63993 480 - 0.4625
cysD sulfate adenylyltransferase subunit 2chromosome CDS3753475 909 - 0.491749
cysG siroheme synthasechromosome CDS3754394 1419 - 0.55673
cysG siroheme synthasechromosome CDS172153 1413 - 0.530078
ddhD cdp-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS3472384 990 - 0.374747
dfp DNA/pantothenate metabolism flavoproteinchromosome CDS60338 1218 - 0.481117
dxs 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS3539789 1860 + 0.489247
fadI NAD(P)H-flavin reductasechromosome CDS4232347 702 - 0.487179
fhuC ferrichrome transport ATP-binding protein FhuCchromosome CDS3787285 795 - 0.543396
folA dihydrofolate reductasechromosome CDS519099 483 + 0.486542
folB putative dihydroneopterin aldolasechromosome CDS705730 360 + 0.5
folC putative FolC bifunctional proteinchromosome CDS3103256 1305 + 0.531034
folD putative FolD bifunctional proteinchromosome CDS3151967 867 + 0.514418
folE GTP cyclohydrolase Ichromosome CDS1708674 663 + 0.453997
folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS3798453 480 + 0.529167
folP dihydropteroate synthasechromosome CDS3911226 834 - 0.476019
gshA glutamate--cysteine ligasechromosome CDS3679377 1560 - 0.482051
gshB glutathione synthetasechromosome CDS1027196 960 + 0.491667
hemA glutamyl-tRNA reductasechromosome CDS2287940 1263 + 0.502771
hemB delta-aminolevulinic acid dehydratasechromosome CDS4235445 1023 - 0.477028
hemC porphobilinogen deaminasechromosome CDS4319664 942 + 0.547771
hemD uroporphyrinogen-III synthasechromosome CDS4320602 750 + 0.512
hemE uroporphyrinogen decarboxylasechromosome CDS4186774 1068 - 0.512172
hemF coproporphyrinogen III oxidase, aerobic HemFchromosome CDS3385073 930 + 0.533333
hemG protoporphyrinogen oxidasechromosome CDS4223798 534 - 0.428839
hemH ferrochelatasechromosome CDS3473971 963 - 0.457944
hemL glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS3782549 1281 + 0.508977
hemN oxygen-independent coproporphyrinogen III oxidasechromosome CDS28982 1374 + 0.477438
hemX putative uroporphyrin-III C-methyltransferasechromosome CDS4321382 1125 + 0.506667
hemY putative protoheme IX biogenesis proteinchromosome CDS4322509 1221 + 0.525798
ilvC ketol-acid reductoisomerasechromosome CDS4362378 1479 - 0.503043
ilvE branched-chain amino acid aminotransferasechromosome CDS4372226 927 - 0.515642
ilvG acetolactate synthase isozyme II large subunitchromosome CDS4373429 1647 - 0.532483
ilvI acetolactate synthase isozyme III large subunitchromosome CDS584017 1728 + 0.497685
ispA geranyltranstransferasechromosome CDS3538713 921 + 0.505972
ispB octaprenyl-diphosphate synthasechromosome CDS3922471 972 + 0.489712
kbl 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS70187 1212 + 0.50165
ldhA D-lactate dehydrogenasechromosome CDS2620043 993 + 0.460222
lipA lipoic acid synthetasechromosome CDS2919074 966 - 0.501035
lipB lipoate-protein ligase Bchromosome CDS2920232 702 - 0.490029
lplA putative lipoate-protein ligase Achromosome CDS2714697 1017 - 0.450344
menA 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS112060 918 - 0.490196
menB naphthoate synthasechromosome CDS2834267 858 - 0.519814
menC putative O-succinylbenzoate-CoA synthasechromosome CDS2833296 972 - 0.569959
menD menaquinone biosynthesis proteinchromosome CDS2835953 1704 - 0.569836
menF menaquinone-specific isochorismate synthasechromosome CDS2837884 1368 - 0.512427
menG S-adenosylmethionine:2-demethylmenaquinonemethyl transferasechromosome CDS111433 486 - 0.475309
metK S-adenosylmethionine synthetasechromosome CDS1023523 1155 + 0.497835
moaA molybdenum cofactor biosynthesis protein Achromosome CDS1306853 981 + 0.492355
moaC molybdenum cofactor biosynthesis protein Cchromosome CDS1307934 480 + 0.533333
moaD molybdopterin [mpt] converting factor, subunit 1chromosome CDS1308410 246 + 0.528455
moaE molybdopterin [mpt] converting factor, subunit 2chromosome CDS1308655 456 + 0.541667
mobA molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS19702 642 - 0.433022
mobB probable molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS19172 531 - 0.40678
moeA molybdopterin biosynthesis proteinchromosome CDS1696082 1275 - 0.499608
moeB molybdopterin biosynthesis proteinchromosome CDS1695310 768 - 0.497396
mogA molybdopterin biosynthesis proteinchromosome CDS491445 588 + 0.45068
nadA quinolinate synthetase Achromosome CDS1273693 1062 + 0.507533
nadB L-aspartate oxidasechromosome CDS3037547 1638 - 0.484127
nadC nicotinate-nucleotide pyrophosphorylase [carboxylating]chromosome CDS3828410 909 + 0.488449
nadD putative nicotinate-nucleotide adenylyltransferasechromosome CDS2928592 663 - 0.490196
nadR transcriptional regulator NadRchromosome CDS465364 1272 + 0.488208
pabA para-aminobenzoate synthase glutamine amidotransferase component IIchromosome CDS188810 576 + 0.520833
panB 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS3799198 801 + 0.521848
panC pantoate--beta-alanine ligasechromosome CDS3800086 855 + 0.530994
panD aspartate 1-decarboxylase precursorchromosome CDS3801351 381 + 0.47769
panF sodium/pantothenate symporterchromosome CDS4075981 1455 - 0.527835
pdxA pyridoxal phosphate biosynthetic proteinchromosome CDS523776 996 - 0.501004
pdxB putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS3097144 1128 + 0.54078
pdxH pyridoxamine 5'-phosphate oxidasechromosome CDS2663279 654 - 0.490826
pdxJ pyridoxal phosphate biosynthetic protein PdxJchromosome CDS3274232 732 - 0.495902
pdxY pyridoxamine kinasechromosome CDS2660808 861 - 0.502904
pncB putative nicotinate phosphoribosyltransferasechromosome CDS1602424 1206 - 0.472637
pnuC intergral membrane NMN transport protein PnuCchromosome CDS1274876 726 + 0.461433
poxB pyruvate dehydrogenase [cytochrome]chromosome CDS1521957 1722 - 0.522648
ribA GTP cyclohydrolase IIchromosome CDS2499403 591 - 0.470389
ribB 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS718102 654 + 0.524465
ribD riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductachromosome CDS3545250 1110 - 0.527928
ribE riboflavin synthase alpha chainchromosome CDS2686255 657 - 0.450533
ribF riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase)chromosome CDS503765 939 + 0.500533
ribH 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS3544644 471 - 0.475584
serA D-3-phosphoglycerate dehydrogenasechromosome CDS1003162 1242 - 0.488728
serC phosphoserine aminotransferasechromosome CDS1568497 1086 + 0.474217
thiC thiamine biosynthesis protein ThiCchromosome CDS4190602 2046 + 0.518084
thiD putative phosphomethylpyrimidine kinasechromosome CDS3196123 801 - 0.556804
thiE thiamine-phosphate pyrophosphorylasechromosome CDS4192661 648 + 0.533951
thiF thiamine biosynthesis protein ThiFchromosome CDS4193298 798 + 0.5401
thiG thiamine biosynthesis protein ThiGchromosome CDS4194123 1002 + 0.535928
thiH thiamine biosynthesis protein ThiHchromosome CDS4195117 1131 + 0.501326
thiL thiamine-monophosphate kinasechromosome CDS3542977 990 - 0.489899
thiQ thiamine transport ATP-binding proteinchromosome CDS563714 684 - 0.548246
trpE anthranilate synthase component Ichromosome CDS2482592 1566 - 0.505109
trpG anthranilate synthase component IIchromosome CDS2482014 579 - 0.519862
ubiA 4-hydroxybenzoate octaprenyltransferasechromosome CDS317386 867 + 0.484429
ubiC putative chorismate--pyruvate lyasechromosome CDS316696 525 + 0.508571
ubiE ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4243465 756 - 0.448413
ubiF putative2-octaprenyl-3-methyl-6-methoxy-1,4-benz oquinolhydroxylasechromosome CDS2944454 1182 + 0.534687
ubiG 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1369739 729 - 0.499314
ubiH 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS998045 1179 - 0.550466
ubiX probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3108000 573 + 0.467714
visC putative monooxygenasechromosome CDS996652 1221 - 0.54955
wbyH putative exported proteinchromosome CDS3466984 1284 - 0.352804
ybtS putative salicylate synthetasechromosome CDS2168365 1305 + 0.55249