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2024-05-14 13:35:02

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Dehalococcoides sp. CBDB1, CBDB1

Number of genes found: 69

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Dehalococcoides sp. CBDB1, CBDB1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA cbdbA350 putative ubiquinone/menaquinone biosynthesis methlytransferase UbiESubName: Full=Putative ubiquinone/menaquinone biosynthesis methlytransferase UbiE; chromosome CDS298668 768 + 0.466146
NA cbdbA45 PyrK family proteinSubName: Full=PyrK family protein; chromosome CDS32606 849 + 0.507656
NA cbdbA840 oxygen-independent coproporphyrinogen III oxidaseSubName: Full=Oxygen-independent coproporphyrinogen III oxidase; chromosome CDS684571 1137 + 0.452946
NA cbdbA579 SNO glutamine amidotransferase family proteinRecName: Full=Glutamine amidotransferase subunit PdxT; EC=2.6.-.-; AltName: Full=Glutamine amidotransferase glutaminase subunit PdxT; chromosome CDS470272 588 - 0.506803
NA cbdbA247 precorrin methylaseSubName: Full=Precorrin methylase; chromosome CDS218670 714 + 0.485994
NA cbdbA364 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS309457 552 + 0.467391
NA cbdbA349 putative ubiquinone/menaquinone biosynthesis methlytransferase UbiESubName: Full=Putative ubiquinone/menaquinone biosynthesis methlytransferase UbiE; EC=2.1.1.-; chromosome CDS297890 777 + 0.455598
NA cbdbA327 pyridoxine biosynthesis proteinRecName: Full=Pyridoxal biosynthesis lyase PdxS; EC=4.-.-.-; chromosome CDS283166 882 - 0.52381
NA cbdbA988 acyl-CoA synthetase (AMP-forming) / AMP-acid ligaseSubName: Full=Acyl-CoA synthetase (AMP-forming) / AMP-acid ligase; EC=6.2.1.30; chromosome CDS796559 1320 - 0.472727
NA cbdbA894 acyl-CoA synthetase (AMP-forming) / AMP-acid ligaseSubName: Full=Acyl-CoA synthetase (AMP-forming) / AMP-acid ligase; chromosome CDS730948 1290 - 0.455039
NA cbdbA1686 ApbESubName: Full=ApbE; chromosome CDS1357007 1062 - 0.484934
NA cbdbA353 SAM-dependent methyltransferase UbiE/COQ5 familySubName: Full=SAM-dependent methyltransferase UbiE/COQ5 family; chromosome CDS301435 603 + 0.456053
ahcY cbdbA477 adenosylhomocysteinaseRecName: Full=Adenosylhomocysteinase; EC=3.3.1.1; AltName: Full=S-adenosyl-L-homocysteine hydrolase; chromosome CDS387274 1257 - 0.505171
birA cbdbA832 biotin-acetyl-CoA-carboxylase ligaseSubName: Full=Biotin-acetyl-CoA-carboxylase ligase; chromosome CDS678004 801 - 0.456929
cbiB cbdbA638 cobalamin biosynthesis proteinRecName: Full=Cobalamin biosynthesis protein CobD; chromosome CDS525007 927 + 0.480043
coaBC cbdbA383 phosphopantothenoylcysteinesynthetase/decarboxyl aseSubName: Full=Phosphopantothenoylcysteine synthetase/decarboxylase; chromosome CDS322268 1182 + 0.5
coaD cbdbA197 pantetheine-phosphate adenylyltransferaseRecName: Full=Phosphopantetheine adenylyltransferase; EC=2.7.7.3; AltName: Full=Dephospho-CoA pyrophosphorylase; AltName: Full=Pantetheine-phosphate adenylyltransferase; Short=PPAT; chromosome CDS181553 480 + 0.495833
coaE cbdbA1268 dephospho-CoA kinaseRecName: Full=Dephospho-CoA kinase; EC=2.7.1.24; AltName: Full=Dephosphocoenzyme A kinase; chromosome CDS1012441 597 + 0.480737
cobA cbdbA1069 cob(I)alamin adenosyltransferaseSubName: Full=Cob(I)alamin adenosyltransferase; EC=2.5.1.17; chromosome CDS867310 549 + 0.482696
cobA cbdbA1141 cob(I)alamin adenosyltransferaseSubName: Full=Cob(I)alamin adenosyltransferase; EC=2.5.1.17; chromosome CDS931418 546 + 0.489011
cobA cbdbA253 cob(I)alamin adenosyltransferaseSubName: Full=Cob(I)alamin adenosyltransferase; EC=2.5.1.17; chromosome CDS223546 540 + 0.475926
cobB cbdbA149 cobyrinic acid a,c-diamide synthaseRecName: Full=Cobyrinic acid A,C-diamide synthase; chromosome CDS143100 1392 - 0.484195
cobD cbdbA1067 cobalamin biosynthesis proteinRecName: Full=Cobalamin biosynthesis protein CobD; chromosome CDS866351 924 + 0.484848
cobD cbdbA254 cobalamin biosynthesis proteinRecName: Full=Cobalamin biosynthesis protein CobD; chromosome CDS224102 957 + 0.505747
cobQ cbdbA890 cobyric acid synthase CobQRecName: Full=Cobyric acid synthase; chromosome CDS727929 1512 + 0.473545
cobS cbdbA642 cobalamin 5'-phosphate synthaseRecName: Full=Cobalamin synthase; EC=2.-.-.-; chromosome CDS528494 765 + 0.486275
cobT cbdbA641 nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferaseRecName: Full=Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Short=NN:DBI PRT; EC=2.4.2.21; AltName: Full=N(1)-alpha-phosphoribosyltransferase; chromosome CDS527396 1059 + 0.493862
cobU cbdbA644 cobinamide kinaseSubName: Full=Cobinamide kinase; chromosome CDS529933 567 + 0.474427
dxs cbdbA720 deoxyxylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS585979 1944 - 0.455761
fepC cbdbA636 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase componentSubName: Full=ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component; chromosome CDS523417 828 + 0.496377
folC cbdbA18 putative folylpolyglutamate synthetaseSubName: Full=Putative folylpolyglutamate synthetase; EC=6.3.2.17; chromosome CDS16438 1317 + 0.519362
folD cbdbA656 methylenetetrahydrofolate dehydrogenaseRecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; EC=1.5.1.5; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase; EC=3.5.4.9; chromosome CDS538255 891 - 0.503928
folE cbdbA1120 GTP cyclohydrolase IRecName: Full=GTP cyclohydrolase 1; EC=3.5.4.16; AltName: Full=GTP cyclohydrolase I; Short=GTP-CH-I; chromosome CDS909750 570 - 0.5
folK cbdbA1698 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinaseSubName: Full=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; EC=2.7.6.3; chromosome CDS1363707 531 + 0.491525
folP cbdbA1696 dihydropteroate synthaseSubName: Full=Dihydropteroate synthase; EC=2.5.1.15; chromosome CDS1362868 849 + 0.519435
hepT cbdbA335 heptaprenyl diphosphate synthase component IISubName: Full=Heptaprenyl diphosphate synthase component II; EC=2.5.1.30; chromosome CDS289817 981 + 0.475025
ilvB cbdbA813 acetolactate synthase, large subunitRecName: Full=Acetolactate synthase; EC=2.2.1.6; chromosome CDS660681 1710 - 0.490643
ilvC cbdbA811 ketol-acid reductoisomeraseRecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; chromosome CDS659152 999 - 0.494494
ilvE cbdbA11 branched-chain amino acid aminotransferaseSubName: Full=Branched-chain amino acid aminotransferase; EC=2.6.1.42; chromosome CDS11400 921 - 0.491857
menA cbdbA352 putative1,4-dihydroxy-2-naphthoateoctaprenyltran sferaseSubName: Full=Putative 1,4-dihydroxy-2-naphthoateoctaprenyltransferase; chromosome CDS300515 921 + 0.48317
metK cbdbA476 S-adenosylmethionine synthetaseRecName: Full=S-adenosylmethionine synthase; Short=AdoMet synthase; EC=2.5.1.6; AltName: Full=MAT; AltName: Full=Methionine adenosyltransferase; chromosome CDS386044 1221 - 0.501229
mobA cbdbA115 putative molybdopterin-guanine dinucleotide biosynthesis protein ASubName: Full=Putative molybdopterin-guanine dinucleotide biosynthesis protein A; chromosome CDS108539 1146 - 0.468586
nabD cbdbA1338 L-aspartate oxidaseSubName: Full=L-aspartate oxidase; chromosome CDS1061512 1548 - 0.507752
nadA cbdbA1681 quinolinate synthetase complex, subunit ARecName: Full=Quinolinate synthase A; EC=2.5.1.72; chromosome CDS1353392 909 - 0.493949
nadC cbdbA1336 nicotinate-nucleotide pyrophosphorylaseSubName: Full=Nicotinate-nucleotide pyrophosphorylase; EC=2.4.2.19; chromosome CDS1060650 861 - 0.454123
nadD cbdbA3 nicotinate (nicotinamide) nucleotideadenylyltransferaseRecName: Full=Probable nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18; AltName: Full=Deamido-NAD(+) diphosphorylase; AltName: Full=Deamido-NAD(+) pyrophosphorylase; AltName: Full=Nicotinate mononucleotide adenylyltransferase; Short=NaMN adenylyltransferase; chromosome CDS3188 615 + 0.492683
panB cbdbA781 3-methyl-2-oxobutanoate hydroxymethyltransferaseRecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; EC=2.1.2.11; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT; chromosome CDS637053 840 + 0.460714
panC cbdbA782 pantoate-beta-alanine ligaseRecName: Full=Pantothenate synthetase; Short=PS; EC=6.3.2.1; AltName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; chromosome CDS637907 807 + 0.447336
panD cbdbA780 aspartate 1-decarboxylaseRecName: Full=Aspartate 1-decarboxylase; EC=4.1.1.11; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Precursor; chromosome CDS636676 375 + 0.464
pncB cbdbA1382 putative nicotinate-nucleotide pyrophosphorylaseSubName: Full=Putative nicotinate-nucleotide pyrophosphorylase; chromosome CDS1100738 1002 + 0.546906
ptpS cbdbA1699 6-pyruvoyl tetrahydrobiopterin synthaseRecName: Full=6-carboxy-5,6,7,8-tetrahydropterin synthase; EC=4.-.-.-; chromosome CDS1364237 372 + 0.473118
pyrK cbdbA1119 dihydroorotate dehydrogenase, electron transfersubunitSubName: Full=Dihydroorotate dehydrogenase, electron transfersubunit; chromosome CDS908883 786 + 0.535623
rdhI cbdbA606 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS495989 750 + 0.42
rdhI cbdbA1066 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS865479 822 + 0.476886
rdhI cbdbA246 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS217919 747 + 0.472557
rdhI cbdbA1557 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS1244208 759 - 0.395257
rdhI cbdbA248 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS219395 837 + 0.504182
rdhI cbdbA1556 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS1243354 858 - 0.441725
ribA cbdbA1103 3,4-dihydroxy-2-butanone 4-phosphatesynthaseRecName: Full=Riboflavin biosynthesis protein RibBA; chromosome CDS891658 1212 - 0.478548
ribD cbdbA1105 riboflavin biosynthesis protein RibDRecName: Full=Riboflavin biosynthesis protein RibD; chromosome CDS893522 1098 - 0.494536
ribE cbdbA1104 riboflavin synthase, alpha subunitSubName: Full=Riboflavin synthase, alpha subunit; EC=2.5.1.9; chromosome CDS892902 618 - 0.475728
ribF cbdbA584 riboflavin biosynthesis protein RibFSubName: Full=Riboflavin biosynthesis protein RibF; chromosome CDS474861 918 - 0.488017
ribH cbdbA1102 6,7-dimethyl-8-ribityllumazine synthaseRecName: Full=6,7-dimethyl-8-ribityllumazine synthase; Short=DMRL synthase; Short=LS; Short=Lumazine synthase; EC=2.5.1.78; chromosome CDS891162 468 - 0.504274
serA cbdbA580 D-3-phosphoglycerate dehydrogenaseSubName: Full=D-3-phosphoglycerate dehydrogenase; EC=1.1.1.95; chromosome CDS470934 1581 - 0.510436
thiC cbdbA749 thiamine biosynthesis protein ThiCRecName: Full=Phosphomethylpyrimidine synthase; EC=4.1.99.17; AltName: Full=Hydroxymethylpyrimidine phosphate synthase; Short=HMP-P synthase; Short=HMP-phosphate synthase; Short=HMPP synthase; AltName: Full=Thiamine biosynthesis protein ThiC; chromosome CDS611744 1296 - 0.527006
thiE cbdbA758 putative thiamine-phosphate pyrophosphorylaseRecName: Full=Thiamine-phosphate synthase; Short=TP synthase; Short=TPS; EC=2.5.1.3; AltName: Full=Thiamine-phosphate pyrophosphorylase; chromosome CDS618448 1059 + 0.484419
thiL cbdbA347 thiamine-monophosphate kinaseRecName: Full=Thiamine-monophosphate kinase; Short=TMP kinase; Short=Thiamine-phosphate kinase; EC=2.7.4.16; chromosome CDS296588 1011 - 0.48368
trpE cbdbA1441 anthranilate synthase component ISubName: Full=Anthranilate synthase component I; EC=4.1.3.27; chromosome CDS1138150 1458 + 0.498628
trpG cbdbA1442 anthranilate synthase component IISubName: Full=Anthranilate synthase component II; EC=4.1.3.27; chromosome CDS1139591 591 + 0.472081