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2024-05-17 13:13:45

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Helicobacter pylori 26695, 26695

Number of genes found: 72

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Helicobacter pylori 26695, 26695
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
HP0002 riboflavin synthase beta chain (ribE)RecName: Full=6,7-dimethyl-8-ribityllumazine synthase; Short=DMRL synthase; Short=LS; Short=Lumazine synthase; EC=2.5.1.78; chromosome CDS635 471 - 0.456476
HP0006 pantoate-beta-alanine ligase (panC)RecName: Full=Pantothenate synthetase; Short=PS; EC=6.3.2.1; AltName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; chromosome CDS3403 831 + 0.410349
HP0029 dethiobiotin synthetase (bioD)RecName: Full=ATP-dependent dethiobiotin synthetase BioD; EC=6.3.3.3; AltName: Full=DTB synthetase; Short=DTBS; AltName: Full=Dethiobiotin synthase; chromosome CDS29411 657 - 0.400304
HP0034 aspartate 1-decarboxylase (panD)RecName: Full=Aspartate 1-decarboxylase; EC=4.1.1.11; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Precursor; chromosome CDS34895 354 + 0.429379
HP0096 phosphoglycerate dehydrogenaseSubName: Full=2-hydroxyacid dehydrogenase; EC=1.1.1.272; SubName: Full=Phosphoglycerate dehydrogenase; chromosome CDS100542 945 + 0.401058
HP0163 delta-aminolevulinic acid dehydratase (hemB)RecName: Full=Delta-aminolevulinic acid dehydratase; Short=ALAD; Short=ALADH; EC=4.2.1.24; AltName: Full=Porphobilinogen synthase; chromosome CDS171427 972 - 0.399177
HP0172 molybdopterin biosynthesis protein (moeA)SubName: Full=Molybdopterin biosynthesis protein; SubName: Full=Molybdopterin biosynthesis protein (MoeA); chromosome CDS178712 1176 - 0.379252
HP0197 S-adenosylmethionine synthetase 2 (metX)RecName: Full=S-adenosylmethionine synthase; Short=AdoMet synthase; EC=2.5.1.6; AltName: Full=MAT; AltName: Full=Methionine adenosyltransferase; chromosome CDS203618 1158 + 0.443869
HP0237 porphobilinogen deaminase (hemC)RecName: Full=Porphobilinogen deaminase; Short=PBG; EC=2.5.1.61; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; chromosome CDS246629 921 - 0.431053
HP0239 glutamyl-tRNA reductase (hemA)RecName: Full=Glutamyl-tRNA reductase; Short=GluTR; EC=1.2.1.70; chromosome CDS249297 1350 - 0.372593
HP0240 octaprenyl-diphosphate synthase (ispB)SubName: Full=Octaprenyl-diphosphate synthase (IspB); chromosome CDS250646 924 - 0.361472
HP0293 para-aminobenzoate synthetase (pabB)SubName: Full=Para-amino benzoate synthetase; SubName: Full=Para-aminobenzoate synthetase (PabB); chromosome CDS309151 1680 + 0.361905
HP0306 glutamate-1-semialdehyde 2,1-aminomutase (hemL)RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase; Short=GSA; EC=5.4.3.8; AltName: Full=Glutamate-1-semialdehyde aminotransferase; Short=GSA-AT; chromosome CDS323725 1293 + 0.435421
HP0329 NH(3)-dependent NAD+ synthetase (nadE)RecName: Full=NH(3)-dependent NAD(+) synthetase; EC=6.3.1.5; chromosome CDS344523 783 - 0.393359
HP0330 ketol-acid reductoisomerase (ilvC)RecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; chromosome CDS345554 993 + 0.417925
HP0354 deoxyxylulose-5-phosphate synthase, putative (dxs)RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS362550 1857 + 0.431879
HP0376 ferrochelatase (hemH)RecName: Full=Ferrochelatase; EC=4.99.1.1; AltName: Full=Heme synthase; AltName: Full=Protoheme ferro-lyase; chromosome CDS384259 1005 + 0.38209
HP0396 conserved hypothetical proteinRecName: Full=Uncharacterized protein HP_0396; chromosome CDS405404 1851 - 0.404106
HP0397 phosphoglycerate dehydrogenase (serA)SubName: Full=D-3-phosphoglycerate dehydrogenase; SubName: Full=Phosphoglycerate dehydrogenase (SerA); chromosome CDS407264 1575 - 0.413968
HP0577 methylene-tetrahydrofolate dehydrogenase (folD)RecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; EC=1.5.1.5; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase; EC=3.5.4.9; chromosome CDS607348 879 - 0.422071
HP0598 8-amino-7-oxononanoate synthase (bioF)RecName: Full=8-amino-7-oxononanoate synthase; Short=AONS; EC=2.3.1.47; AltName: Full=7-keto-8-amino-pelargonic acid synthase; Short=7-KAP synthase; Short=KAPA synthase; AltName: Full=8-amino-7-ketopelargonate synthase; AltName: Full=Alpha-oxoamine synthase; chromosome CDS632820 1122 - 0.382353
HP0604 uroporphyrinogen decarboxylase (hemE)RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD; Short=URO-D; EC=4.1.1.37; chromosome CDS640268 1023 + 0.408602
HP0654 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS699570 1083 + 0.385042
HP0656 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS703397 1152 + 0.414931
HP0665 oxygen-independent coproporphyrinogen III oxidase (hemN)RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase; Short=CPO; EC=1.3.99.22; AltName: Full=Coproporphyrinogen III dehydrogenase; Short=CPDH; chromosome CDS712342 1374 + 0.396652
HP0755 molybdopterin biosynthesis protein (moeB)SubName: Full=Molybdopterin biosynthesis protein (MoeB); chromosome CDS809635 633 + 0.399684
HP0761 H. pylori predicted coding region HP0761SubName: Full=Uncharacterized protein; chromosome CDS815545 603 - 0.39801
HP0768 molybdenum cofactor biosynthesis protein A (moaA)RecName: Full=Cyclic pyranopterin monophosphate synthase; EC=4.1.99.18; AltName: Full=Molybdenum cofactor biosynthesis protein A; chromosome CDS820477 966 - 0.355072
HP0769 molybdopterin-guanine dinucleotide biosynthesis protein A (mobA)RecName: Full=Molybdenum cofactor guanylyltransferase; Short=MoCo guanylyltransferase; EC=2.7.7.77; AltName: Full=GTP:molybdopterin guanylyltransferase; AltName: Full=Mo-MPT guanylyltransferase; AltName: Full=Molybdopterin guanylyltransferase; AltName: Full=Molybdopterin-guanine dinucleotide synthase; Short=MGD synthase; chromosome CDS821530 606 + 0.354785
HP0798 molybdenum cofactor biosynthesis protein C (moaC)RecName: Full=Cyclic pyranopterin monophosphate synthase accessory protein; AltName: Full=Molybdenum cofactor biosynthesis protein C; chromosome CDS854858 477 - 0.406709
HP0799 molybdopterin biosynthesis protein (mog)RecName: Full=Molybdopterin adenylyltransferase; Short=MPT adenylyltransferase; EC=2.7.7.75; chromosome CDS855343 531 - 0.399247
HP0800 molybdopterin converting factor, subunit 2 (moaE)RecName: Full=Molybdopterin synthase catalytic subunit; EC=2.8.1.12; AltName: Full=MPT synthase subunit 2; AltName: Full=Molybdenum cofactor biosynthesis protein E; AltName: Full=Molybdopterin-converting factor large subunit; AltName: Full=Molybdopterin-converting factor subunit 2; chromosome CDS855886 438 - 0.372146
HP0801 molybdopterin converting factor, subunit 1 (moaD)SubName: Full=Molybdopterin converting factor, subunit 1 (MoaD); chromosome CDS856324 225 - 0.377778
HP0802 GTP cyclohydrolase II (ribA)RecName: Full=GTP cyclohydrolase-2; EC=3.5.4.25; AltName: Full=GTP cyclohydrolase II; chromosome CDS856621 579 - 0.402418
HP0804 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (ribA, ribB)RecName: Full=3,4-dihydroxy-2-butanone 4-phosphate synthase; Short=DHBP synthase; EC=4.1.99.12; chromosome CDS858216 1035 - 0.405797
HP0814 thiamin biosynthesis protein (thiF)SubName: Full=Thiamin biosynthesis protein (ThiF); chromosome CDS867598 768 + 0.404948
HP0831 conserved hypothetical ATP binding proteinRecName: Full=Dephospho-CoA kinase; EC=2.7.1.24; AltName: Full=Dephosphocoenzyme A kinase; chromosome CDS883640 591 - 0.370558
HP0841 pantothenate metabolism flavoprotein (dfp)SubName: Full=Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; EC=6.3.2.5; SubName: Full=Pantothenate metabolism flavoprotein (Dfp); chromosome CDS892480 1278 + 0.395149
HP0843 thiamin phosphate pyrophosphorylase/hyroxyethylthiazole kinase (thiB)RecName: Full=Thiamine-phosphate synthase; Short=TP synthase; Short=TPS; EC=2.5.1.3; AltName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP pyrophosphorylase; Short=TMP-PPase; chromosome CDS894519 660 - 0.421212
HP0844 thiamine biosynthesis protein (thi)RecName: Full=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; EC=2.7.1.49; EC=2.7.4.7; AltName: Full=Hydroxymethylpyrimidine kinase; Short=HMP kinase; AltName: Full=Hydroxymethylpyrimidine phosphate kinase; Short=HMP-P kinase; Short=HMP-phosphate kinase; Short=HMPP kinase; chromosome CDS895171 813 - 0.448954
HP0845 thiamin phosphate pyrophosphorylase/hyroxyethylthiazole kinase (thiM)RecName: Full=Hydroxyethylthiazole kinase; EC=2.7.1.50; AltName: Full=4-methyl-5-beta-hydroxyethylthiazole kinase; Short=TH kinase; Short=Thz kinase; chromosome CDS895977 822 - 0.42944
HP0888 iron(III) dicitrate ABC transporter, ATP-binding protein (fecE)RecName: Full=Probable iron chelatin transport ATP-binding protein HP_0888; chromosome CDS942347 768 - 0.390625
HP0928 GTP cyclohydrolase I (folE)RecName: Full=GTP cyclohydrolase 1; EC=3.5.4.16; AltName: Full=GTP cyclohydrolase I; Short=GTP-CH-I; chromosome CDS991247 543 + 0.388582
HP0929 geranyltranstransferase (ispA)SubName: Full=Geranyltranstransferase; SubName: Full=Geranyltranstransferase (IspA); chromosome CDS991805 912 + 0.377193
HP0933 H. pylori predicted coding region HP0933RecName: Full=6-carboxy-5,6,7,8-tetrahydropterin synthase; Short=CPH4 synthase; EC=4.1.2.50; AltName: Full=Queuosine biosynthesis protein QueD; chromosome CDS994173 603 + 0.378109
HP0976 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA)RecName: Full=Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; EC=2.6.1.62; AltName: Full=7,8-diamino-pelargonic acid aminotransferase; Short=DAPA AT; Short=DAPA aminotransferase; AltName: Full=7,8-diaminononanoate synthase; Short=DANS; AltName: Full=Diaminopelargonic acid synthase; chromosome CDS1037710 1311 - 0.395881
HP1036 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (folK)RecName: Full=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; EC=2.7.6.3; AltName: Full=6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; Short=PPPK; AltName: Full=7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; Short=HPPK; chromosome CDS1096987 492 - 0.353659
HP1058 3-methyl-2-oxobutanoate hydroxymethyltransferase (panB)RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; EC=2.1.2.11; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT; chromosome CDS1119911 813 + 0.409594
HP1087 riboflavin biosynthesis regulatory protein (ribC)SubName: Full=Bifunctional riboflavin kinase/FMN adenylyltransferase; EC=2.7.7.2; SubName: Full=Riboflavin biosynthesis regulatory protein (RibC); chromosome CDS1145705 843 + 0.366548
HP1140 biotin operon repressor/biotin acetyl coenzyme A carboxylase synthetase (birA)SubName: Full=Biotin operon repressor/biotin acetyl coenzyme A carboxylase synthetase (BirA); SubName: Full=Biotin--protein ligase; EC=6.3.4.15; chromosome CDS1201436 639 - 0.394366
HP1224 uroporphyrinogen III cosynthase (hemD)SubName: Full=Uroporphyrinogen III cosynthase (HemD); SubName: Full=Uroporphyrinogen-III synthase; EC=4.2.1.75; chromosome CDS1300376 681 + 0.378855
HP1226 oxygen-independent coproporphyrinogen III oxidase (hemN)SubName: Full=Oxygen-independent coproporphyrinogen III oxidase (HemN); chromosome CDS1301547 1059 - 0.387158
HP1232 dihydropteroate synthase (folP)RecName: Full=Bifunctional dihydropteroate synthase/dihydropteroate reductase; Includes: RecName: Full=Dihydropteroate synthase; Short=DHPS; EC=2.5.1.15; AltName: Full=Dihydropteroate pyrophosphorylase; Includes: RecName: Full=Dihydropteroate reductase; EC=1.5.1.-; chromosome CDS1305995 1143 + 0.406824
HP1281 anthranilate synthase component II (trpD)RecName: Full=Anthranilate synthase component 2; Short=AS; Short=ASII; EC=4.1.3.27; AltName: Full=Anthranilate synthase, GATase component; AltName: Full=Anthranilate synthase, glutamine amidotransferase component; chromosome CDS1356686 585 - 0.381197
HP1282 anthranilate synthase component I (trpE)RecName: Full=Anthranilate synthase component 1; Short=AS; Short=ASI; EC=4.1.3.27; chromosome CDS1357267 1503 - 0.413174
HP1290 nicotinamide mononucleotide transporter (pnuC)SubName: Full=Nicotinamide mononucleotide transporter (PnuC); chromosome CDS1365401 663 + 0.363499
HP1291 conserved hypothetical proteinSubName: Full=Thiamine pyrophosphokinase; SubName: Full=Uncharacterized protein; chromosome CDS1366051 615 + 0.373984
HP1337 conserved hypothetical proteinRecName: Full=Probable nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18; AltName: Full=Deamido-NAD(+) diphosphorylase; AltName: Full=Deamido-NAD(+) pyrophosphorylase; AltName: Full=Nicotinate mononucleotide adenylyltransferase; Short=NaMN adenylyltransferase; chromosome CDS1397819 525 - 0.398095
HP1355 nicotinate-nucleotide pyrophosphorylase (nadC)RecName: Full=Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]; EC=2.4.2.19; AltName: Full=Quinolinate phosphoribosyltransferase [decarboxylating]; Short=QAPRTase; chromosome CDS1417068 822 - 0.416058
HP1356 quinolinate synthetase A (nadA)RecName: Full=Quinolinate synthase A; EC=2.5.1.72; chromosome CDS1417889 1011 - 0.399604
HP1360 4-hydroxybenzoate octaprenyltransferase (ubiA)SubName: Full=4-hydroxybenzoate octaprenyltransferase (UbiA); SubName: Full=Prenyltransferase; EC=2.5.1.-; chromosome CDS1420692 885 - 0.411299
HP1406 biotin synthetase (bioB)RecName: Full=Biotin synthase; EC=2.8.1.6; chromosome CDS1471119 849 + 0.438163
HP1468 branched-chain-amino-acid aminotransferase (ilvE)RecName: Full=Branched-chain-amino-acid aminotransferase; Short=BCAT; EC=2.6.1.42; chromosome CDS1538762 1023 - 0.454545
HP1475 lipopolysaccharide core biosynthesis protein (kdtB)RecName: Full=Phosphopantetheine adenylyltransferase; EC=2.7.7.3; AltName: Full=Dephospho-CoA pyrophosphorylase; AltName: Full=Pantetheine-phosphate adenylyltransferase; Short=PPAT; chromosome CDS1547912 474 - 0.409283
HP1476 phenylacrylic acid decarboxylaseRecName: Full=Probable aromatic acid decarboxylase; EC=4.1.1.-; chromosome CDS1548385 564 - 0.437943
HP1483 gerC2 protein (gerC2)SubName: Full=GerC2 protein (GerC2); SubName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase; EC=2.1.1.-; chromosome CDS1556519 741 - 0.392713
HP1505 riboflavin biosynthesis protein (ribG)SubName: Full=Riboflavin biosynthesis protein (RibG); chromosome CDS1577937 1035 - 0.401932
HP1510 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1583630 354 + 0.367232
HP1545 folylpolyglutamate synthase (folC)SubName: Full=Bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC; SubName: Full=Folylpolyglutamate synthase (FolC); chromosome CDS1623814 1185 - 0.374684
HP1574 riboflavin synthase alpha subunit (ribC)SubName: Full=Riboflavin synthase alpha subunit (RibC); SubName: Full=Riboflavin synthase subunit alpha; EC=2.5.1.9; chromosome CDS1654696 621 + 0.397746
HP1582 pyridoxal phosphate biosynthetic protein J (pdxJ)RecName: Full=Pyridoxine 5-phosphate synthase; Short=PNP synthase; EC=2.6.99.2; chromosome CDS1660610 789 + 0.382763
HP1583 pyridoxal phosphate biosynthetic protein A (pdxA)RecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase; EC=1.1.1.262; AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase; chromosome CDS1661400 924 + 0.433983