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2024-05-14 07:43:51

Gene list

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COG category: Carbohydrate transport and metabolism
Genomic element: chromosome

Number of genes found: 200

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Saccharophagus degradans 2-40, 2-40
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Sde_0560 putative pullulanase precursorchromosome CDS687240 4299 + 0.45685
NA Sde_1302 Methylglyoxal synthasechromosome CDS1691995 465 - 0.496774
NA Sde_3026 transcriptional regulator, GntR familychromosome CDS3866544 372 + 0.451613
NA Sde_1025 Ribosomal protein S18chromosome CDS1308169 2265 + 0.508168
NA Sde_2672 Ribosomal protein S15chromosome CDS3388246 1503 - 0.526281
NA Sde_0774 putative transcriptional regulator, Fis familychromosome CDS998716 1503 + 0.463739
NA Sde_0618 Oligopeptide transporter OPTchromosome CDS780820 1008 - 0.47619
NA Sde_3061 xylanase/chitin deacetylase-likechromosome CDS3914031 2304 + 0.484809
NA Sde_1268 Carbon storage regulatorchromosome CDS1625446 984 - 0.473577
NA Sde_1278 fructose-1,6-bisphosphatasechromosome CDS1637948 969 + 0.446852
NA Sde_0819 Cell division protein FtsAchromosome CDS1066453 987 - 0.507599
NA Sde_0941 putative D-mannonate oxidoreductase proteinchromosome CDS1215435 1479 + 0.498986
NA Sde_2675 Initiation factor 2chromosome CDS3393854 1236 - 0.472492
NA Sde_1410 Inositol-1(or 4)-monophosphatasechromosome CDS1828658 804 - 0.481343
NA Sde_3023 Endoglucanase-likechromosome CDS3860209 2610 - 0.508812
NA Sde_0245 Beta-glucosidasechromosome CDS307565 2589 - 0.483971
NA Sde_0766 putative LACI-type transcriptional regulatorchromosome CDS989835 948 + 0.46097
NA Sde_1988 DNA polymerase 3, epsilon subunitchromosome CDS2497816 2613 - 0.432836
NA Sde_1710 conserved hypothetical proteinchromosome CDS2185402 1113 + 0.485175
NA Sde_1487 Beta-glucosidasechromosome CDS1913511 2682 + 0.454884
NA Sde_0472 transketolasechromosome CDS575670 2004 + 0.500998
NA Sde_1277 Fructose-bisphosphate aldolasechromosome CDS1636840 1080 + 0.460185
NA Sde_0986 4-alpha-glucanotransferasechromosome CDS1258888 2175 + 0.473563
NA Sde_1656 conserved hypothetical proteinchromosome CDS2124585 1083 - 0.463527
NA Sde_1850 sensor protein GLPSchromosome CDS2340399 909 + 0.487349
NA Sde_1177 Threonine synthasechromosome CDS1516378 2580 + 0.460853
NA Sde_1382 FeS assembly ATPase SufCchromosome CDS1787579 630 + 0.45873
NA Sde_2284 putative cation symporterchromosome CDS2904952 1386 - 0.434343
NA Sde_2116 putative nucleotide di-P-sugar epimerase or dehydratasechromosome CDS2705111 960 - 0.423958
NA Sde_1032 putative transmembrane sugar transporterchromosome CDS1320352 678 - 0.467552
NA Sde_1006 Conserved hypothetical phage tail region proteinchromosome CDS1287278 1644 - 0.506083
NA Sde_1572 3-hydroxyacyl-CoA dehydrogenasechromosome CDS2019046 1098 - 0.470856
NA Sde_3121 Glucan endo-1,3-beta-D-glucosidasechromosome CDS3992562 2229 - 0.476447
NA Sde_2718 Prevent-host-death proteinchromosome CDS3445133 1341 - 0.494407
NA Sde_1269 Methylglyoxal synthasechromosome CDS1626453 891 - 0.484848
NA Sde_1485 Transaldolasechromosome CDS1911176 933 - 0.468382
NA Sde_0049 hypothetical proteinchromosome CDS53230 495 + 0.389899
NA Sde_0612 sugar-phosphate isomerasechromosome CDS774234 639 + 0.488263
NA Sde_0939 carbohydrate kinase, PfkBchromosome CDS1212570 957 - 0.502612
NA Sde_2878 histidine kinasechromosome CDS3645279 2907 + 0.477812
NA Sde_3605 Holliday junction resolvase YqgFchromosome CDS4567796 2379 + 0.541824
NA Sde_0692 hypothetical proteinchromosome CDS894577 1200 + 0.4325
NA Sde_0652 Beta-glucanase/Beta-glucan synthetase-likechromosome CDS825854 1710 - 0.515789
NA Sde_1380 Glucose-6-phosphate 1-dehydrogenasechromosome CDS1784154 1476 + 0.436314
NA Sde_3964 transporter, putativechromosome CDS4996300 1224 + 0.430556
NA Sde_3003 hypothetical proteinchromosome CDS3828980 3504 + 0.502568
NA Sde_0932 Ribosomal protein L22chromosome CDS1205133 996 + 0.472892
NA Sde_1394 Beta-glucosidasechromosome CDS1805639 1335 - 0.450936
NA Sde_0169 mannosidasechromosome CDS207182 2466 + 0.451338
NA Sde_0156 hypothetical proteinchromosome CDS193465 1017 - 0.444444
NA Sde_0987 1,4-alpha-glucan branching enzymechromosome CDS1261070 2190 + 0.461187
NA Sde_3371 sugar fermentation stimulation proteinchromosome CDS4297950 702 - 0.498576
NA Sde_0988 glycogen operon proteinchromosome CDS1263294 2151 + 0.466295
NA Sde_3279 Fructose-bisphosphate aldolasechromosome CDS4188375 1098 - 0.467213
NA Sde_2501 DNA recombination protein, RuvAchromosome CDS3165702 1710 - 0.460234
NA Sde_3603 TonB-likechromosome CDS4563392 1386 + 0.497114
NA Sde_3239 Cellulasechromosome CDS4130713 1917 + 0.474178
NA Sde_3277 DNA polymerase III, delta subunitchromosome CDS4185784 756 - 0.503968
NA Sde_2936 beta-galactosidasechromosome CDS3729047 930 - 0.511828
NA Sde_0494 Protein of unknown function UPF0047chromosome CDS606837 1551 - 0.522888
NA Sde_0475 Beta-glucosidase-related glycosidases-likechromosome CDS580566 4746 + 0.483776
NA Sde_3271 Apolipoprotein N-acyltransferasechromosome CDS4172806 2670 - 0.472285
NA Sde_2490 2-isopropylmalate synthasechromosome CDS3145429 1701 - 0.4903
NA Sde_0991 Starch (glycogen) synthasechromosome CDS1269298 1551 + 0.479691
NA Sde_2634 Host factor Hfqchromosome CDS3332885 1413 + 0.476999
NA Sde_3676 Phosphomannomutasechromosome CDS4658557 2493 - 0.45728
NA Sde_0358 methyl-accepting chemotaxis sensory transducerchromosome CDS442112 1845 - 0.511111
NA Sde_2656 2-dehydro-3-deoxygluconokinasechromosome CDS3370836 939 + 0.513312
NA Sde_0508 conserved hypothetical proteinchromosome CDS621821 1233 + 0.454988
NA Sde_1187 Aldose 1-epimerasechromosome CDS1532766 1065 + 0.482629
NA Sde_1444 extracellular solute-binding protein, family 3chromosome CDS1865168 3555 + 0.476512
NA Sde_0775 Dihydrouridine synthase TIM-barrel protein nifR3chromosome CDS1000437 957 + 0.456635
NA Sde_1704 Peptidase M, neutral zinc metallopeptidases, zinc-binding sitechromosome CDS2177107 1632 - 0.496936
NA Sde_0635 6-phosphogluconate dehydrogenase, decarboxylatingchromosome CDS801714 1455 - 0.493471
NA Sde_0632 phosphoglycerate mutasechromosome CDS797760 534 + 0.458802
NA Sde_2935 beta-galactosidasechromosome CDS3727209 1815 - 0.483747
NA Sde_0990 glucose-1-phosphate adenylyltransferasechromosome CDS1268019 1278 + 0.449922
NA Sde_0910 Pectate lyase/Amb allergenchromosome CDS1175627 468 + 0.478632
NA Sde_2636 DNA mismatch repair proteinchromosome CDS3335102 1866 - 0.469453
NA Sde_0907 Na+/melibiose symporter and related transporters-likechromosome CDS1171148 1617 - 0.474335
NA Sde_3882 truncated beta-galactosidasechromosome CDS4897212 2886 - 0.523562
NA Sde_2090 transporter, putativechromosome CDS2674116 1143 - 0.452318
NA Sde_1308 Pyruvate kinasechromosome CDS1700097 1443 + 0.474705
NA Sde_1468 transglycolase; epimerasechromosome CDS1891598 846 - 0.48818
NA Sde_2773 membrane protein, putativechromosome CDS3505203 951 - 0.537329
NA Sde_1271 D-mannonate oxidoreductasechromosome CDS1628441 1473 - 0.453496
NA Sde_3870 Chitinasechromosome CDS4875936 3816 - 0.468816
NA Sde_2062 Phosphoglycerate mutasechromosome CDS2640831 690 - 0.482609
NA Sde_0573 alpha-amylase G-6 precursorchromosome CDS707513 1701 + 0.433862
NA Sde_3040 N-acetylglucosamine-6-phosphate deacetylasechromosome CDS3886922 1185 - 0.477637
NA Sde_3038 Multiple antibiotic resistance (MarC)-related proteinschromosome CDS3884170 1332 + 0.441441
NA Sde_1001 Phosphomannomutasechromosome CDS1283148 1362 + 0.483113
NA Sde_0995 DNA polymerase III, alpha subunitchromosome CDS1276856 1416 + 0.507768
NA Sde_1707 conserved hypothetical protein SC3F9.06 SC3F9.06chromosome CDS2181538 1056 - 0.482008
NA Sde_1018 Pectic acid lyasechromosome CDS1301478 966 + 0.467909
NA Sde_0589 Glycosidases-likechromosome CDS731243 2118 - 0.475449
NA Sde_1026 Ribosomal protein L9chromosome CDS1310734 1569 + 0.455704
NA Sde_2938 ATPasechromosome CDS3732199 1692 + 0.470449
NA Sde_1706 conserved hypothetical protein-signal peptide and transmembrane predictionchromosome CDS2180262 1203 - 0.448878
NA Sde_0935 phosphofructokinasechromosome CDS1208089 1290 + 0.451163
NA Sde_0955 Glycogen debranching enzyme GlgXchromosome CDS1239717 1527 + 0.487885
NA Sde_0773 AICARFT/IMPCHase bienzymechromosome CDS997927 693 + 0.460317
NA Sde_1272 Sodium pump decarboxylase, gamma subunitchromosome CDS1629913 1416 - 0.476695
NA Sde_3834 sugar efflux transporterchromosome CDS4833852 1116 + 0.508961
NA Sde_0601 alpha-glucosidasechromosome CDS753692 1623 + 0.492914
NA Sde_1892 high-affinity H+/gluconate symporterchromosome CDS2387582 1314 - 0.460426
NA Sde_3982 Protein of unknown function DUF37chromosome CDS5012464 3441 + 0.526882
NA Sde_0788 Aldose 1-epimerasechromosome CDS1017392 1074 + 0.457169
NA Sde_3727 Cold shock proteinchromosome CDS4724878 1242 + 0.443639
NA Sde_0776 MJ0042 finger-like regionchromosome CDS1001495 1344 + 0.451637
NA Sde_2138 Flagellar biosynthesis protein FliQchromosome CDS2729319 1206 - 0.5
NA Sde_3147 phosphoheptose isomerasechromosome CDS4022877 585 + 0.487179
NA Sde_2375 Glucose/sorbosone dehydrogenases-likechromosome CDS3006520 6519 - 0.468017
NA Sde_3980 tRNA modification GTPase TrmEchromosome CDS5010796 771 - 0.428016
NA Sde_0767 putative sugar uptake ABC transporter ATP-binding proteinchromosome CDS990871 1506 + 0.468792
NA Sde_2504 Xylose isomerasechromosome CDS3173716 1332 - 0.454955
NA Sde_0653 regulatory protein, LacIchromosome CDS827992 1092 + 0.46978
NA Sde_0940 Glucuronate isomerasechromosome CDS1213937 1416 + 0.512006
NA Sde_2993 Endoglucanase-likechromosome CDS3808643 2592 - 0.47608
NA Sde_2674 Ribosome-binding factor Achromosome CDS3391161 2601 + 0.473664
NA Sde_2497 TonB-likechromosome CDS3155564 3219 - 0.48338
NA Sde_0677 chitooligosaccharide deacetylase-likechromosome CDS862360 804 + 0.517413
NA Sde_0989 Phosphorylasechromosome CDS1265504 2451 + 0.436557
NA Sde_3949 Chitinase IIchromosome CDS4978444 768 - 0.539062
NA Sde_3496 hypothetical proteinchromosome CDS4451978 921 + 0.436482
NA Sde_1017 glucose/galactose transporterchromosome CDS1299887 1287 - 0.451437
NA Sde_2545 putative mRNA-binding proteinchromosome CDS3227738 984 + 0.488821
NA Sde_0139 FkbHchromosome CDS171293 888 - 0.417793
NA Sde_0325 Dihydroxy-acid dehydratasechromosome CDS404856 1356 + 0.479351
NA Sde_3976 ParB-like partition proteinchromosome CDS5007720 753 - 0.432935
NA Sde_1891 Mannonate dehydratasechromosome CDS2386337 1188 - 0.473064
NA Sde_3490 drug resistance transporter, EmrB/QacA familychromosome CDS4444620 1566 - 0.476373
NA Sde_1379 Iron-sulphur cluster assembly transcription factor IscRchromosome CDS1782369 1008 - 0.483135
NA Sde_2633 Endo-1,4-beta-xylanasechromosome CDS3331475 1125 - 0.504889
NA Sde_0473 Phosphoglycerate kinasechromosome CDS577947 1176 + 0.481293
NA Sde_1889 putative transmembrane proteinchromosome CDS2384794 867 + 0.472895
NA Sde_1381 FeS assembly protein SufBchromosome CDS1785704 1830 + 0.487432
NA Sde_0556 Alpha amylase, catalytic subdomainchromosome CDS676857 1875 + 0.465067
NA Sde_2505 CDP-diacylglycerol--serineO-phosphatidyltransferasechromosome CDS3175100 1485 - 0.481481
NA Sde_1298 Thioredoxinchromosome CDS1686771 357 + 0.448179
NA Sde_0685 Na+/melibiose symporter and related transporters-likechromosome CDS872934 1368 + 0.489035
NA Sde_0203 conserved hypothetical proteinchromosome CDS261704 1077 + 0.414113
NA Sde_1024 Ribosomal protein S6chromosome CDS1307097 882 - 0.481859
NA Sde_1285 Beta-galactosidase/beta-glucuronidase-likechromosome CDS1648241 2475 + 0.455758
NA Sde_1273 Oxaloacetate decarboxylase, alpha subunitchromosome CDS1631473 1194 - 0.466499
NA Sde_1446 conserved hypothetical proteinchromosome CDS1870866 1119 + 0.505809
NA Sde_0693 Triosephosphate isomerasechromosome CDS895885 774 - 0.46124
NA Sde_0505 Mannose-6-phosphate isomerasechromosome CDS618130 1158 + 0.521589
NA Sde_0599 transporter, putativechromosome CDS749375 1506 - 0.468792
NA Sde_3280 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS4189686 939 - 0.452609
NA Sde_3037 Beta-N-acetylhexosaminidasechromosome CDS3881762 2388 + 0.459799
NA Sde_3763 conserved hypothetical extracellular solute-binding protein,family 7chromosome CDS4761939 1137 - 0.48197
NA Sde_3719 Phosphate transport system permease protein 1chromosome CDS4706520 891 + 0.526375
NA Sde_0722 transcriptional regulator, Crp/Fnr familychromosome CDS934653 2403 + 0.488972
NA Sde_2452 conserved hypothetical ebiP983chromosome CDS3099529 1227 - 0.447433
NA Sde_3481 conserved hypothetical drug transport transmembrane proteinchromosome CDS4435150 1182 + 0.481387
NA Sde_2632 HflKchromosome CDS3329473 1824 - 0.460526
NA Sde_1922 Heavy metal efflux pump CzcAchromosome CDS2423218 846 + 0.453901
NA Sde_0906 NdvB proteinchromosome CDS1168671 2367 - 0.492607
NA Sde_1546 Ribosomal protein L35chromosome CDS1991873 903 - 0.429679
NA Sde_3503 hypothetical proteinchromosome CDS4458598 924 + 0.457792
NA Sde_0684 DNA primasechromosome CDS870285 2358 + 0.452926
NA Sde_3021 Beta-glucanase/Beta-glucan synthetase-likechromosome CDS3855380 2169 - 0.473029
NA Sde_3182 HNH nucleasechromosome CDS4057348 270 + 0.455556
NA Sde_2927 beta-1,3-glucanase precursorchromosome CDS3712588 4326 - 0.484743
NA Sde_0769 Helix-turn-helix, AraC typechromosome CDS993440 963 + 0.443406
NA Sde_0064 putative secreted beta-mannosidasechromosome CDS78862 1686 + 0.483393
NA Sde_1897 Secretion protein HlyDchromosome CDS2395595 1458 - 0.466392
NA Sde_2996 Endoglucanase-likechromosome CDS3815747 2562 - 0.473458
NA Sde_0323 TonB-likechromosome CDS401230 2013 + 0.486339
NA Sde_1245 Phosphopyruvate hydratasechromosome CDS1596174 1287 + 0.461538
NA Sde_3872 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-likechromosome CDS4880764 1971 + 0.486048
NA Sde_3036 conserved hypothetical proteinchromosome CDS3880638 912 + 0.516447
NA Sde_3282 putative hexuronate transporterchromosome CDS4191571 1275 - 0.465098
NA Sde_3387 Ribose 5-phosphate epimerasechromosome CDS4321711 681 + 0.502203
NA Sde_1254 CinA-likechromosome CDS1604544 1641 + 0.487508
NA Sde_1348 6-phosphogluconate dehydratasechromosome CDS1745344 576 + 0.404514
NA Sde_3210 sucrose phosphorylasechromosome CDS4086377 1791 + 0.45952
NA Sde_2309 hypothetical proteinchromosome CDS2934045 420 - 0.42619
NA Sde_1318 cellobiose-phosphorylasechromosome CDS1710240 2436 - 0.460181
NA Sde_1790 Beta-N-acetylhexosaminidasechromosome CDS2281377 1035 + 0.468599
NA Sde_2934 Endo-1,4-beta-xylanasechromosome CDS3724831 1860 - 0.470968
NA Sde_1767 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunitchromosome CDS2254858 1605 - 0.461059
NA Sde_1395 putative membrane proteinchromosome CDS1807300 1332 + 0.463213
NA Sde_0879 hypothetical proteinchromosome CDS1137764 1587 - 0.504096
NA Sde_3214 conserved hypothetical proteinchromosome CDS4092408 873 - 0.460481
NA Sde_2649 Glutamate synthase, NADH/NADPH, small subunit 2chromosome CDS3350602 1611 - 0.47424
NA Sde_3394 GGDEFchromosome CDS4325861 1266 - 0.472354
NA Sde_2717 Triosephosphate isomerasechromosome CDS3444195 741 - 0.500675
NA Sde_1031 putative metabolite transport protein CsbCchromosome CDS1319480 756 - 0.431217
NA Sde_1516 response regulator receiver domain protein (CheY-like)chromosome CDS1955429 906 - 0.398455
NA Sde_0728 membrane protein, putativechromosome CDS941175 921 + 0.453855
NA Sde_0563 Alpha-amylasechromosome CDS695508 1824 + 0.492325
NA Sde_0768 conserved hypothetical ABC transporter permease protein ytfTchromosome CDS992414 1023 + 0.463343
NA Sde_0746 Ribulose-phosphate 3-epimerasechromosome CDS962024 687 + 0.50655
NA Sde_2500 Holliday junction DNA helicase RuvBchromosome CDS3162714 2922 - 0.46783
NA Sde_3180 response regulator receiver sensor signal transduction histidine kinasechromosome CDS4055864 453 + 0.492274
NA Sde_1097 RNA methyltransferase TrmH, group 2chromosome CDS1407158 1158 - 0.478411
NA Sde_0120 transporter, MFS superfamilychromosome CDS150915 1194 + 0.463149
NA Sde_0181 Beta-1 4-xylanase-likechromosome CDS225639 1725 + 0.496812