Gene list
Applied filters:
COG category: Carbohydrate transport and metabolism
Genomic element: chromosome
Number of genes found: 320
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella sonnei Ss046, Ss046 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SSO_2421 | putative tail component of prophage | chromosome | CDS | 2559065 | 396 | - | 0.532828 |
NA | SSO_0801 | putative hexuronate transporter | chromosome | CDS | 850280 | 1302 | - | 0.541475 |
NA | SSO_2306 | conserved hypothetical protein | chromosome | CDS | 2433878 | 804 | - | 0.533582 |
NA | SSO_1595 | 6-phospho-beta-glucosidase | chromosome | CDS | 1676323 | 1440 | + | 0.452083 |
NA | SSO_0800 | putative glucosidase | chromosome | CDS | 847902 | 2364 | - | 0.551607 |
NA | SSO_0854 | putative nucleotide di-P-sugar epimerase or dehydratase | chromosome | CDS | 905021 | 1050 | - | 0.53619 |
NA | SSO_1499 | putative transport protein | chromosome | CDS | 1574687 | 1170 | + | 0.539316 |
NA | SSO_2307 | putative transport protein | chromosome | CDS | 2434699 | 1329 | - | 0.523702 |
NA | SSO_0830 | putative DEOR-type transcriptional regulator | chromosome | CDS | 882931 | 1209 | - | 0.545906 |
NA | SSO_2148 | putative kinase | chromosome | CDS | 2252793 | 966 | + | 0.568323 |
NA | SSO_4051 | putative transporter | chromosome | CDS | 4284801 | 1434 | + | 0.497211 |
NA | SSO_3110 | conserved hypothetical protein | chromosome | CDS | 3270431 | 231 | + | 0.454545 |
NA | SSO_2086 | putative enzyme of sugar metabolism | chromosome | CDS | 2180926 | 825 | - | 0.52 |
NA | SSO_2454 | sucrose hydrolase | chromosome | CDS | 2589467 | 1434 | + | 0.511855 |
NA | SSO_2888 | putative transport protein | chromosome | CDS | 3028745 | 1365 | + | 0.518681 |
NA | SSO_2380 | putative transport protein | chromosome | CDS | 2510710 | 1179 | - | 0.568278 |
NA | SSO_1856 | putative DEOR-type transcriptional regulator | chromosome | CDS | 1955190 | 750 | + | 0.496 |
NA | SSO_1830 | putative transport periplasmic protein | chromosome | CDS | 1926644 | 1311 | - | 0.51106 |
NA | SSO_1289 | putative alpha-mannosidase | chromosome | CDS | 1363481 | 1653 | - | 0.399879 |
NA | SSO_2020 | conserved hypothetical protein | chromosome | CDS | 2114023 | 384 | - | 0.494792 |
NA | SSO_1810 | conserved hypothetical protein | chromosome | CDS | 1906770 | 639 | + | 0.425665 |
NA | SSO_2450 | sucrose permease | chromosome | CDS | 2581659 | 1248 | + | 0.435897 |
NA | SSO_2946 | putative transport protein | chromosome | CDS | 3090475 | 1353 | - | 0.521064 |
NA | SSO_2478 | putative transport protein | chromosome | CDS | 2620582 | 1248 | - | 0.541667 |
NA | SSO_1826 | putative transient receptor potential locus | chromosome | CDS | 1923263 | 789 | - | 0.52725 |
NA | SSO_2825 | Permease | chromosome | CDS | 2969533 | 1185 | + | 0.547679 |
NA | SSO_2802 | putative enzyme | chromosome | CDS | 2946772 | 1554 | + | 0.382239 |
NA | SSO_1287 | hypothetical protein | chromosome | CDS | 1361414 | 1296 | - | 0.378086 |
NA | SSO_2456 | D-serine permease | chromosome | CDS | 2592134 | 219 | + | 0.484018 |
NA | SSO_2145 | conserved hypothetical protein | chromosome | CDS | 2249209 | 1125 | - | 0.512 |
NA | SSO_4387 | putative dicarboxylate-binding periplasmic protein | chromosome | CDS | 4652552 | 972 | - | 0.445473 |
NA | SSO_2319 | putative transport/receptor protein | chromosome | CDS | 2448445 | 669 | + | 0.512706 |
NA | SSO_2317 | conserved hypothetical protein | chromosome | CDS | 2445853 | 891 | + | 0.529742 |
NA | SSO_2479 | putative PTS system enzyme IIB component | chromosome | CDS | 2621851 | 327 | - | 0.501529 |
NA | SSO_1463 | putative amino acid/amine transport protein | chromosome | CDS | 1536641 | 1272 | - | 0.455189 |
NA | SSO_1432 | conserved hypothetical protein | chromosome | CDS | 1507223 | 861 | - | 0.518002 |
NA | SSO_4053 | conserved hypothetical protein | chromosome | CDS | 4287672 | 888 | + | 0.497748 |
NA | SSO_2476 | conserved hypothetical protein | chromosome | CDS | 2618445 | 1038 | - | 0.568401 |
NA | SSO_3111 | putative dicarboxylate-binding periplasmic protein | chromosome | CDS | 3270665 | 753 | + | 0.410359 |
ampG | SSO_0416 | regulates beta-lactamase synthesis | chromosome | CDS | 440867 | 1476 | - | 0.54065 |
amyA | SSO_1983 | cytoplasmic alpha-amylase | chromosome | CDS | 2082364 | 1488 | + | 0.497984 |
araA | SSO_0068 | L-arabinose isomerase | chromosome | CDS | 74663 | 1503 | - | 0.552894 |
araD | SSO_0067 | L-ribulose-5-phosphate 4-epimerase | chromosome | CDS | 73799 | 696 | - | 0.551724 |
araE | SSO_3001 | low-affinity L-arabinose transport system proton symport protein | chromosome | CDS | 3153044 | 1419 | - | 0.517266 |
araF | SSO_1217 | L-arabinose-binding periplasmic protein | chromosome | CDS | 1291221 | 990 | + | 0.514141 |
araG | SSO_1218 | ATP-binding component of high-affinity L-arabinose transport system | chromosome | CDS | 1292280 | 1515 | + | 0.521452 |
araH | SSO_1219 | ABC-type arabinose transport system, permease component | chromosome | CDS | 1293806 | 990 | + | 0.50404 |
araJ | SSO_0373 | protein involved in either transport or processing of arabinose polymers | chromosome | CDS | 396394 | 1185 | - | 0.506329 |
ascB | SSO_2860 | 6-phospho-beta-glucosidase, cryptic | chromosome | CDS | 3002227 | 1425 | + | 0.521403 |
ascF | SSO_2859 | PTS system enzyme II ABC (asc), cryptic | chromosome | CDS | 3000761 | 1458 | + | 0.563786 |
bglA | SSO_3054 | 6-phospho-beta-glucosidase A, cryptic | chromosome | CDS | 3213468 | 1440 | + | 0.513194 |
bglF | SSO_3912 | PTS system beta-glucoside-specific, enzyme II, cryptic | chromosome | CDS | 4129458 | 1878 | + | 0.514377 |
bglX | SSO_2189 | beta-D-glucoside glucohydrolase, periplasmic | chromosome | CDS | 2292624 | 2298 | - | 0.5396 |
celA | SSO_1420 | PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin | chromosome | CDS | 1494250 | 321 | + | 0.439252 |
celB | SSO_1421 | PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin | chromosome | CDS | 1494655 | 1359 | + | 0.494481 |
celC | SSO_1422 | PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin | chromosome | CDS | 1496064 | 351 | + | 0.492877 |
celF | SSO_1424 | cryptic phospho-beta-glucosidase | chromosome | CDS | 1497369 | 1353 | + | 0.467849 |
citE | SSO_0568 | citrate lyase beta chain; acyl lyase subunit | chromosome | CDS | 608585 | 924 | - | 0.575758 |
cmtB | SSO_3088 | PTS system, mannitol-specific enzyme II component, cryptic | chromosome | CDS | 3250661 | 444 | - | 0.427928 |
cpsB | SSO_2102 | mannose-1-phosphate guanyltransferase | chromosome | CDS | 2195528 | 1437 | - | 0.555324 |
cpsG | SSO_2101 | phosphomannomutase | chromosome | CDS | 2194053 | 1371 | - | 0.545587 |
crr | SSO_2506 | PTS system, glucose-specific IIA component | chromosome | CDS | 2644427 | 510 | + | 0.470588 |
deoB | SSO_4534 | phosphopentomutase | chromosome | CDS | 4804290 | 1224 | + | 0.540033 |
deoR | SSO_0825 | transcriptional repressor for deo operon, tsx, nupG | chromosome | CDS | 878781 | 759 | - | 0.504611 |
dgoK | SSO_3644 | 2-oxo-3-deoxygalactonate kinase | chromosome | CDS | 3814840 | 879 | - | 0.536974 |
dgoT | SSO_3642 | D-galactonate transport | chromosome | CDS | 3811682 | 1338 | - | 0.528401 |
ebgA | SSO_3215 | evolved beta-D-galactosidase, alpha subunit; cryptic gene | chromosome | CDS | 3379694 | 2826 | + | 0.541401 |
ebgC | SSO_3216 | evolved beta-D-galactosidase, beta subunit; cryptic gene | chromosome | CDS | 3382783 | 450 | + | 0.455556 |
eda | SSO_1298 | 2-keto-3-deoxygluconate 6-phosphate aldolase/2-keto-4-hydroxyglutarate aldolase | chromosome | CDS | 1375543 | 642 | + | 0.55919 |
edd | SSO_1297 | 6-phosphogluconate dehydratase | chromosome | CDS | 1373695 | 1812 | + | 0.537528 |
emrB | SSO_2830 | probably membrane translocase | chromosome | CDS | 2973840 | 1539 | + | 0.564652 |
emrD | SSO_3627 | 2-module integral membrane pump | chromosome | CDS | 3796932 | 1191 | + | 0.565071 |
emrY | SSO_2458 | multidrug resistance protein Y | chromosome | CDS | 2593806 | 1539 | - | 0.416504 |
eno | SSO_2936 | enolase | chromosome | CDS | 3076370 | 1299 | - | 0.505004 |
epd | SSO_3079 | D-erythrose 4-phosphate dehydrogenase | chromosome | CDS | 3243643 | 1020 | - | 0.514706 |
fba | SSO_3077 | fructose-bisphosphate aldolase, class II | chromosome | CDS | 3241136 | 1080 | - | 0.511111 |
fbp | SSO_4413 | fructose-bisphosphatase | chromosome | CDS | 4681111 | 999 | - | 0.513514 |
fruA | SSO_2223 | PTS system, fructose-specific transport protein | chromosome | CDS | 2332516 | 1692 | - | 0.549054 |
fruB | SSO_2225 | PTS system, fructose-specific IIA/fpr component | chromosome | CDS | 2335162 | 1131 | - | 0.556145 |
fruK | SSO_2224 | fructose-1-phosphate kinase | chromosome | CDS | 2334224 | 939 | - | 0.531416 |
frvA | SSO_4070 | PTS system, fructose-specific IIA component | chromosome | CDS | 4306628 | 447 | - | 0.50783 |
frvB | SSO_4069 | PTS system, fructose-like enzyme IIBC component | chromosome | CDS | 4305166 | 1458 | - | 0.557613 |
frvR | SSO_4067 | putative frv operon regulatory protein | chromosome | CDS | 4302358 | 1749 | - | 0.498571 |
frvX | SSO_4068 | frv operon protein | chromosome | CDS | 4304106 | 1071 | - | 0.527544 |
frwC | SSO_4122 | PTS system, fructose-like enzyme II component | chromosome | CDS | 4362171 | 1080 | + | 0.537963 |
frwD | SSO_4126 | PTS system fructose-like IIB component 2 | chromosome | CDS | 4366778 | 342 | + | 0.564327 |
fsr | SSO_0468 | fosmidomycin resistance protein | chromosome | CDS | 496905 | 1143 | - | 0.530184 |
fucA | SSO_2957 | L-fuculose-1-phosphate aldolase | chromosome | CDS | 3102817 | 648 | - | 0.493827 |
fucK | SSO_2960 | L-fuculokinase | chromosome | CDS | 3107214 | 1449 | + | 0.506556 |
fucP | SSO_2958 | fucose permease | chromosome | CDS | 3104011 | 1317 | + | 0.474563 |
fucR | SSO_2962 | positive regulator of the fuc operon | chromosome | CDS | 3109144 | 732 | + | 0.48224 |
fucU | SSO_2961 | protein of fucose operon | chromosome | CDS | 3108664 | 423 | + | 0.486998 |
galK | SSO_0709 | galactokinase | chromosome | CDS | 750849 | 1149 | - | 0.528285 |
galM | SSO_0708 | galactose-1-epimerase | chromosome | CDS | 749815 | 1041 | - | 0.555235 |
galP | SSO_3097 | galactose-proton symport of transport system | chromosome | CDS | 3260007 | 1395 | + | 0.532616 |
gapA | SSO_1384 | glyceraldehyde-3-phosphate dehydrogenase A | chromosome | CDS | 1458786 | 996 | - | 0.502008 |
gapC | SSO_1725 | Glyceraldehyde-3-phosphate dehydrogenase | chromosome | CDS | 1827111 | 1002 | + | 0.479042 |
gatB | SSO_2140 | galactitol-specific enzyme IIB of phosphotransferase system | chromosome | CDS | 2245197 | 285 | - | 0.424561 |
gatC | SSO_2139 | PTS system galactitol-specific enzyme IIC | chromosome | CDS | 2243838 | 1356 | - | 0.509587 |
gatR | SSO_2137 | Galactitol utilization operon repressor | chromosome | CDS | 2241871 | 780 | - | 0.465385 |
gatY | SSO_2144 | tagatose-bisphosphate aldolase 1 | chromosome | CDS | 2248036 | 861 | - | 0.524971 |
gcd | SSO_0132 | glucose dehydrogenase | chromosome | CDS | 147811 | 2391 | - | 0.554161 |
gip | SSO_0503 | glyoxylate-induced protein | chromosome | CDS | 531529 | 852 | - | 0.462441 |
glgA | SSO_3669 | glycogen synthase | chromosome | CDS | 3843140 | 1434 | - | 0.548117 |
glgB | SSO_3672 | 1,4-alpha-glucan branching enzyme | chromosome | CDS | 3847856 | 2187 | - | 0.530407 |
glgC | SSO_3670 | glucose-1-phosphate adenylyltransferase | chromosome | CDS | 3844573 | 1296 | - | 0.52392 |
glgP | SSO_3668 | glycogen phosphorylase | chromosome | CDS | 3840674 | 2448 | - | 0.510212 |
glgX | SSO_3671 | part of glycogen operon, a glycosyl hydrolase, debranching enzyme | chromosome | CDS | 3845886 | 1974 | - | 0.544073 |
glk | SSO_2480 | glucokinase | chromosome | CDS | 2622397 | 966 | - | 0.506211 |
glpF | SSO_4096 | facilitated diffusion of glycerol | chromosome | CDS | 4331284 | 846 | - | 0.508274 |
glpR | SSO_3660 | repressor of the glp operon | chromosome | CDS | 3831775 | 759 | - | 0.538867 |
glpT | SSO_2301 | sn-glycerol-3-phosphate permease | chromosome | CDS | 2427047 | 1359 | - | 0.526122 |
glpX | SSO_4094 | unknown function in glycerol metabolism | chromosome | CDS | 4328610 | 1011 | - | 0.562809 |
glvC | SSO_3634 | Phosphotransferase system enzyme IIBC component | chromosome | CDS | 3803231 | 1878 | - | 0.51278 |
gmhA | SSO_0264 | phosphoheptose isomerase | chromosome | CDS | 293690 | 579 | + | 0.507772 |
gnd | SSO_2100 | gluconate-6-phosphate dehydrogenase, decarboxylating | chromosome | CDS | 2192483 | 1407 | - | 0.508173 |
gntK | SSO_3679 | gluconokinase 2 | chromosome | CDS | 3857683 | 489 | - | 0.507157 |
gntT | SSO_3547 | high-affinity transport permease for gluconate | chromosome | CDS | 3710012 | 1317 | + | 0.536067 |
gntU | SSO_3678 | H+/gluconate symporter | chromosome | CDS | 3856339 | 1341 | - | 0.551827 |
gpmA | SSO_0707 | phosphoglyceromutase 1 | chromosome | CDS | 748860 | 753 | - | 0.512616 |
gpmB | SSO_4545 | phosphoglyceromutase 2 | chromosome | CDS | 4817410 | 648 | + | 0.561728 |
gsk | SSO_0464 | inosine-guanosine kinase | chromosome | CDS | 492209 | 1305 | + | 0.521073 |
hcaT | SSO_2618 | MFS (major facilitator superfamily) transporter | chromosome | CDS | 2769899 | 1140 | - | 0.564035 |
hpaI | SSO_4494 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (HHED aldolase) | chromosome | CDS | 4767956 | 789 | - | 0.60583 |
hpaX | SSO_4493 | putative 4-hydroxyphenylacetate permease | chromosome | CDS | 4766405 | 1377 | - | 0.541031 |
hrsA | SSO_0682 | protein modification enzyme, induction of ompC | chromosome | CDS | 726492 | 1977 | + | 0.543753 |
idnK | SSO_4453 | gluconate kinase | chromosome | CDS | 4725086 | 564 | + | 0.439716 |
idnT | SSO_4450 | L-idonate transporter | chromosome | CDS | 4721666 | 1320 | - | 0.505303 |
ilvD | SSO_3942 | dihydroxyacid dehydratase | chromosome | CDS | 4162833 | 1851 | + | 0.562939 |
imm | SSO_3600 | putative membrane transport protein | chromosome | CDS | 3766221 | 1194 | - | 0.567002 |
kdgK | SSO_3865 | ketodeoxygluconokinase | chromosome | CDS | 4070724 | 1149 | - | 0.545692 |
kduI | SSO_3003 | pectin degrading enzyme 5-keto 4-deoxyuronate isomerase-like protein | chromosome | CDS | 3155605 | 837 | - | 0.493429 |
kgtP | SSO_2713 | alpha-ketoglutarate permease | chromosome | CDS | 2870781 | 1299 | - | 0.488838 |
lacZ | SSO_0299 | beta-D-galactosidase | chromosome | CDS | 328041 | 3075 | + | 0.560976 |
lamB | SSO_4214 | phage lambda receptor protein | chromosome | CDS | 4469524 | 1341 | + | 0.51827 |
malE | SSO_4212 | periplasmic maltose-binding protein | chromosome | CDS | 4466782 | 1191 | - | 0.509656 |
malF | SSO_4211 | part of maltose permease, periplasmic | chromosome | CDS | 4465084 | 1545 | - | 0.525566 |
malG | SSO_4210 | part of maltose permease, inner membrane | chromosome | CDS | 4464179 | 891 | - | 0.545455 |
malK | SSO_4213 | ATP-binding component of transport system for maltose | chromosome | CDS | 4468337 | 1116 | + | 0.551075 |
malP | SSO_3549 | maltodextrin phosphorylase | chromosome | CDS | 3713467 | 2394 | - | 0.521303 |
malQ | SSO_3548 | 4-alpha-glucanotransferase | chromosome | CDS | 3711373 | 2085 | - | 0.549161 |
malX | SSO_1537 | PTS system, maltose and glucose-specific II ABC | chromosome | CDS | 1612398 | 1593 | - | 0.531701 |
malZ | SSO_0380 | maltodextrin glucosidase | chromosome | CDS | 407609 | 1818 | + | 0.544004 |
manA | SSO_1547 | mannose-6-phosphate isomerase | chromosome | CDS | 1624922 | 1176 | - | 0.508503 |
manX | SSO_1343 | PTS enzyme IIAB, mannose-specific | chromosome | CDS | 1416321 | 972 | - | 0.502058 |
manY | SSO_1342 | PTS enzyme IIC, mannose-specific | chromosome | CDS | 1415458 | 801 | - | 0.515606 |
manZ | SSO_1341 | PTS enzyme IID, mannose-specific | chromosome | CDS | 1414594 | 861 | - | 0.528455 |
melA | SSO_4294 | alpha-galactosidase | chromosome | CDS | 4560223 | 1356 | + | 0.519912 |
mglA | SSO_2205 | ATP-binding component of methyl-galactoside transport and galactose taxis | chromosome | CDS | 2310587 | 1521 | - | 0.453649 |
mglB | SSO_2206 | galactose-binding transport protein | chromosome | CDS | 2312168 | 999 | - | 0.510511 |
mglC | SSO_2204 | methyl-galactoside transport and galactose taxis | chromosome | CDS | 2309561 | 1011 | - | 0.503462 |
mgsA | SSO_0967 | methylglyoxal synthase | chromosome | CDS | 1044648 | 468 | - | 0.519231 |
mhpT | SSO_0332 | putative transport protein | chromosome | CDS | 359500 | 1257 | + | 0.564041 |
mipB | SSO_0807 | putative transaldolase | chromosome | CDS | 858720 | 735 | + | 0.52381 |
mlc | SSO_1570 | putative NAGC-like transcriptional regulator | chromosome | CDS | 1649579 | 1221 | + | 0.523342 |
mrsA | SSO_3324 | MrsA | chromosome | CDS | 3501806 | 1338 | - | 0.539611 |
mtlA | SSO_3809 | PTS system, mannitol-specific enzyme IIABC components | chromosome | CDS | 3997377 | 1914 | - | 0.536573 |
mtlD | SSO_3808 | mannitol-1-phosphate dehydrogenase | chromosome | CDS | 3996000 | 1149 | - | 0.526545 |
nagA | SSO_0631 | N-acetylglucosamine-6-phosphate deacetylase | chromosome | CDS | 664484 | 1149 | - | 0.522193 |
nagB | SSO_0632 | glucosamine-6-phosphate deaminase | chromosome | CDS | 665692 | 801 | - | 0.483146 |
nagC | SSO_0630 | transcriptional repressor of nag (N-acetylglucosamine) operon | chromosome | CDS | 663255 | 1221 | - | 0.530713 |
nagD | SSO_0629 | N-acetylglucosamine metabolism | chromosome | CDS | 662455 | 753 | - | 0.535193 |
nagE | SSO_0633 | PTS system, N-acetylglucosamine-specific enzyme IIABC | chromosome | CDS | 666825 | 1947 | + | 0.544427 |
nanT | SSO_3365 | sialic acid transporter | chromosome | CDS | 3542821 | 1521 | - | 0.553583 |
nupG | SSO_3232 | transport of nucleosides, permease protein | chromosome | CDS | 3408152 | 1305 | - | 0.495019 |
otsA | SSO_1221 | trehalose-6-phosphate synthase | chromosome | CDS | 1295737 | 1425 | + | 0.492632 |
otsB | SSO_1220 | trehalose-6-phosphate phophatase, biosynthetic | chromosome | CDS | 1294962 | 801 | + | 0.505618 |
pduF | SSO_2057 | propanediol diffusion facilitator | chromosome | CDS | 2155699 | 810 | - | 0.476543 |
pfkA | SSO_4085 | 6-phosphofructokinase I | chromosome | CDS | 4321593 | 963 | + | 0.536864 |
pfkB | SSO_1434 | 6-phosphofructokinase II | chromosome | CDS | 1508580 | 930 | - | 0.539785 |
pgi | SSO_4203 | glucosephosphate isomerase | chromosome | CDS | 4455348 | 1650 | + | 0.51697 |
pgk | SSO_3078 | phosphoglycerate kinase | chromosome | CDS | 3242430 | 1164 | - | 0.521478 |
pgm | SSO_0642 | phosphoglucomutase | chromosome | CDS | 676497 | 1641 | + | 0.553321 |
phpB | SSO_0592 | PhpB | chromosome | CDS | 630666 | 525 | - | 0.506667 |
ppsA | SSO_1457 | phosphoenolpyruvate synthase | chromosome | CDS | 1530699 | 2379 | + | 0.54855 |
proP | SSO_4286 | low-affinity transport system | chromosome | CDS | 4548814 | 1503 | + | 0.502329 |
ptsA | SSO_4121 | PEP-protein phosphotransferase system enzyme I | chromosome | CDS | 4359361 | 2136 | - | 0.549625 |
ptsG | SSO_1121 | PTS system, glucose-specific IIBC component | chromosome | CDS | 1199160 | 1434 | + | 0.525105 |
ptsH | SSO_2504 | PTS system protein HPr | chromosome | CDS | 2642357 | 258 | + | 0.507752 |
ptsI | SSO_2505 | PEP-protein phosphotransferase system enzyme I | chromosome | CDS | 2642659 | 1728 | + | 0.496528 |
ptsN | SSO_3352 | phosphotransferase system enzyme IIA, regulates N metabolism | chromosome | CDS | 3525652 | 492 | + | 0.520325 |
ptsO | SSO_3354 | phosphocarrier protein HPr-like NPr | chromosome | CDS | 3527040 | 273 | + | 0.501832 |
ptxA | SSO_4377 | putative PTS system enzyme II A component | chromosome | CDS | 4646958 | 465 | + | 0.554839 |
pykA | SSO_1294 | glucose-stimulated pyruvate kinase II | chromosome | CDS | 1369208 | 1443 | - | 0.525295 |
pykF | SSO_1480 | pyruvate kinase I | chromosome | CDS | 1554860 | 1413 | - | 0.501062 |
rbsA | SSO_3919 | ATP-binding component of D-ribose high-affinity transport system | chromosome | CDS | 4140223 | 1506 | + | 0.512616 |
rbsC | SSO_3920 | D-ribose high-affinity transport system | chromosome | CDS | 4141733 | 966 | + | 0.533126 |
rbsD | SSO_3918 | D-ribose high-affinity transport system | chromosome | CDS | 4139760 | 456 | + | 0.471491 |
rbsK | SSO_3922 | ribokinase | chromosome | CDS | 4143735 | 930 | + | 0.521505 |
rhaA | SSO_4073 | L-rhamnose isomerase | chromosome | CDS | 4308765 | 1260 | - | 0.561905 |
rhaB | SSO_4074 | rhamnulokinase | chromosome | CDS | 4310021 | 1470 | - | 0.555782 |
rhaD | SSO_4072 | rhamnulose-phosphate aldolase | chromosome | CDS | 4307699 | 825 | - | 0.549091 |
rpe | SSO_3517 | D-ribulose-5-phosphate 3-epimerase | chromosome | CDS | 3677029 | 678 | - | 0.50885 |
rpiA | SSO_3066 | ribosephosphate isomerase, constitutive | chromosome | CDS | 3228860 | 660 | - | 0.524242 |
rpiB | SSO_4266 | ribose 5-phosphate isomerase B | chromosome | CDS | 4532282 | 318 | + | 0.512579 |
sgaB | SSO_4376 | putative PTS system enzyme IIB protein | chromosome | CDS | 4646643 | 306 | + | 0.513072 |
sgaE | SSO_4380 | putative epimerase/aldolase | chromosome | CDS | 4648950 | 687 | + | 0.569141 |
sgaH | SSO_4378 | putative hexulose-6-phosphate synthase | chromosome | CDS | 4647436 | 651 | + | 0.560676 |
sgaU | SSO_4379 | putative hexulose-6-phosphate isomerase | chromosome | CDS | 4648096 | 855 | + | 0.578947 |
shiA | SSO_4052 | putative transport protein shikimate | chromosome | CDS | 4286333 | 1350 | + | 0.465926 |
sorA | SSO_4195 | putative sorbose-permease PTS system IIC component | chromosome | CDS | 4448110 | 798 | - | 0.531328 |
sorF | SSO_4197 | putative sorbose-permease PTS system IIA component | chromosome | CDS | 4449467 | 408 | - | 0.52451 |
sorM | SSO_4194 | putative sorbose-permease PTS system IID component | chromosome | CDS | 4447275 | 825 | - | 0.546667 |
srlA | SSO_2846 | PTS system, glucitol/sorbitol-specific IIC component, one of two | chromosome | CDS | 2987081 | 564 | + | 0.501773 |
srlB | SSO_2848 | PTS system, glucitol/sorbitol-specific enzyme IIA component | chromosome | CDS | 2988611 | 372 | + | 0.556452 |
srlE | SSO_2847 | PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components | chromosome | CDS | 2987641 | 960 | + | 0.546875 |
srlR | SSO_2851 | regulator for gut (srl), glucitol operon | chromosome | CDS | 2990285 | 774 | + | 0.479328 |
suhB | SSO_2615 | SuhB | chromosome | CDS | 2766634 | 804 | + | 0.542289 |
talA | SSO_2544 | transaldolase A | chromosome | CDS | 2680732 | 951 | + | 0.50368 |
talB | SSO_0009 | transaldolase B | chromosome | CDS | 9014 | 954 | + | 0.513627 |
talC | SSO_4120 | putative transaldolase | chromosome | CDS | 4358687 | 663 | - | 0.542986 |
tktA | SSO_3089 | transketolase 1 isozyme | chromosome | CDS | 3251418 | 1992 | - | 0.559739 |
tktB | SSO_2545 | transketolase 2 isozyme | chromosome | CDS | 2681702 | 2004 | + | 0.547405 |
torT | SSO_1002 | TorT | chromosome | CDS | 1075909 | 1029 | + | 0.527697 |
tpiA | SSO_4088 | triosephosphate isomerase | chromosome | CDS | 4324781 | 768 | - | 0.53125 |
treB | SSO_4421 | PTS system enzyme II | chromosome | CDS | 4691212 | 1422 | - | 0.547117 |
treC | SSO_4420 | trehalase 6-P hydrolase | chromosome | CDS | 4689507 | 1656 | - | 0.531401 |
treF | SSO_3567 | cytoplasmic trehalase | chromosome | CDS | 3733993 | 1650 | - | 0.538788 |
ugpA | SSO_3690 | sn-glycerol 3-phosphate transport system integral membrane protein | chromosome | CDS | 3867646 | 888 | - | 0.560811 |
ugpC | SSO_3688 | ATP-binding component of sn-glycerol 3-phosphate transport system | chromosome | CDS | 3865732 | 1110 | - | 0.576577 |
ugpE | SSO_3689 | sn-glycerol 3-phosphate transport protein | chromosome | CDS | 3866804 | 846 | - | 0.535461 |
uhpC | SSO_3621 | regulator of uhpT | chromosome | CDS | 3790322 | 1323 | - | 0.549509 |
uhpT | SSO_3620 | hexose phosphate transport protein | chromosome | CDS | 3788793 | 1392 | - | 0.530891 |
uidA | SSO_1543 | beta-D-glucuronidase | chromosome | CDS | 1618602 | 1812 | + | 0.523731 |
uidB | SSO_1544 | glucuronide permease | chromosome | CDS | 1620410 | 1374 | + | 0.513828 |
uxaA | SSO_3244 | altronate hydrolase | chromosome | CDS | 3419244 | 1488 | - | 0.541667 |
uxaB | SSO_1607 | altronate oxidoreductase | chromosome | CDS | 1688152 | 1449 | + | 0.522429 |
uxaC | SSO_3245 | uronate isomerase | chromosome | CDS | 3420746 | 1413 | - | 0.539986 |
uxuA | SSO_4477 | mannonate hydrolase | chromosome | CDS | 4749389 | 1185 | + | 0.546835 |
uxuB | SSO_4478 | D-mannonate oxidoreductase | chromosome | CDS | 4750654 | 1461 | + | 0.572211 |
waaD | SSO_3786 | ADP-L-glycero-D-mannoheptose-6-epimerase | chromosome | CDS | 3970989 | 933 | - | 0.513398 |
wcaG | SSO_2105 | putative nucleotide di-P-sugar epimerase or dehydratase | chromosome | CDS | 2198669 | 966 | - | 0.563147 |
xylA | SSO_3820 | D-xylose isomerase | chromosome | CDS | 4014034 | 1323 | + | 0.506425 |
xylB | SSO_3821 | xylulokinase | chromosome | CDS | 4015428 | 1332 | + | 0.542042 |
xylE | SSO_4209 | xylose-proton symport | chromosome | CDS | 4462332 | 1476 | - | 0.489837 |
yabM | SSO_0076 | putative transport protein | chromosome | CDS | 85405 | 1116 | + | 0.491935 |
yadE | SSO_0138 | conserved hypothetical protein | chromosome | CDS | 154057 | 1230 | + | 0.497561 |
yadI | SSO_0137 | putative PTS system enzyme IIB component | chromosome | CDS | 153553 | 441 | + | 0.496599 |
yajF | SSO_0371 | possible NAGC-like transcriptional regulator | chromosome | CDS | 395205 | 1047 | + | 0.541547 |
yajR | SSO_0404 | putative transport protein | chromosome | CDS | 430271 | 1371 | - | 0.528811 |
ybdA | SSO_0542 | putative transport | chromosome | CDS | 581745 | 1251 | + | 0.577938 |
ybhC | SSO_0745 | putative pectinesterase | chromosome | CDS | 788737 | 1284 | - | 0.534268 |
ybhE | SSO_0741 | putative isomerase | chromosome | CDS | 783379 | 996 | + | 0.545181 |
ybjM | SSO_0833 | conserved hypothetical protein | chromosome | CDS | 886889 | 378 | + | 0.489418 |
ybjT | SSO_0855 | putative dTDP-glucose enzyme | chromosome | CDS | 906133 | 1431 | - | 0.548567 |
ycaD | SSO_0899 | putative transport | chromosome | CDS | 959766 | 1149 | + | 0.518712 |
yceE | SSO_1067 | putative transport protein | chromosome | CDS | 1147017 | 1050 | - | 0.52 |
yceL | SSO_1085 | conserved hypothetical protein | chromosome | CDS | 1165423 | 1239 | - | 0.550444 |
ycfF | SSO_1123 | conserved hypothetical protein | chromosome | CDS | 1203176 | 360 | + | 0.505556 |
ycfO | SSO_1127 | conserved hypothetical protein | chromosome | CDS | 1205386 | 1026 | + | 0.52729 |
ycfX | SSO_1139 | putative NAGC-like transcriptional regulator | chromosome | CDS | 1219903 | 912 | + | 0.526316 |
yciM | SSO_1860 | putative heat shock protein | chromosome | CDS | 1957808 | 1170 | - | 0.519658 |
ycjO | SSO_1829 | putative binding-protein dependent transport protein | chromosome | CDS | 1925742 | 882 | - | 0.537415 |
ycjT | SSO_1824 | conserved hypothetical protein | chromosome | CDS | 1919934 | 2268 | - | 0.537919 |
yddG | SSO_1651 | conserved hypothetical protein | chromosome | CDS | 1744397 | 882 | + | 0.5 |
ydeA | SSO_1600 | putative resistance/regulatory protein | chromosome | CDS | 1679808 | 1191 | - | 0.514694 |
ydfI | SSO_1586 | putative oxidoreductase | chromosome | CDS | 1667336 | 1461 | + | 0.495551 |
ydhC | SSO_1496 | putative transport protein | chromosome | CDS | 1570855 | 1212 | - | 0.533003 |
yeaD | SSO_1382 | conserved hypothetical protein | chromosome | CDS | 1456380 | 906 | - | 0.496689 |
yegB | SSO_2129 | putative transport protein | chromosome | CDS | 2233495 | 1416 | + | 0.555085 |
yegT | SSO_2146 | putative nucleoside permease protein | chromosome | CDS | 2250518 | 1278 | + | 0.500782 |
yeiC | SSO_2222 | putative kinase | chromosome | CDS | 2331117 | 942 | - | 0.457537 |
yeiI | SSO_2216 | putative kinase | chromosome | CDS | 2324517 | 1089 | + | 0.473829 |
yeiO | SSO_2226 | putative transport | chromosome | CDS | 2336660 | 1182 | + | 0.527073 |
yeiQ | SSO_2228 | putative oxidoreductase | chromosome | CDS | 2339042 | 1467 | + | 0.513974 |
yfjB | SSO_2771 | conserved hypothetical protein | chromosome | CDS | 2923169 | 879 | + | 0.499431 |
ygaH | SSO_2827 | conserved hypothetical protein | chromosome | CDS | 2971568 | 336 | + | 0.553571 |
ygbI | SSO_2883 | putative DEOR-type transcriptional regulator | chromosome | CDS | 3024110 | 798 | - | 0.515038 |
ygbL | SSO_2886 | putative epimerase/aldolase | chromosome | CDS | 3027237 | 639 | + | 0.535211 |
ygbM | SSO_2887 | conserved hypothetical protein | chromosome | CDS | 3027880 | 777 | + | 0.513514 |
ygcS | SSO_2924 | putative transport protein | chromosome | CDS | 3062371 | 1410 | - | 0.531915 |
ygeD | SSO_2995 | putative resistance proteins | chromosome | CDS | 3144991 | 1194 | - | 0.555276 |
ygjK | SSO_3125 | putative isomerase | chromosome | CDS | 3283664 | 2352 | - | 0.545918 |
ygjV | SSO_3243 | conserved hypothetical protein | chromosome | CDS | 3418610 | 552 | - | 0.498188 |
yhaD | SSO_3279 | conserved hypothetical protein | chromosome | CDS | 3455089 | 1227 | - | 0.534637 |
yhaF | SSO_3281 | conserved hypothetical protein | chromosome | CDS | 3457251 | 771 | - | 0.520104 |
yhaG | SSO_3283 | putative hydrolase | chromosome | CDS | 3459746 | 1572 | + | 0.53626 |
yhaU | SSO_3282 | putative transport protein | chromosome | CDS | 3458037 | 1335 | - | 0.510112 |
yhbE | SSO_3332 | conserved hypothetical protein | chromosome | CDS | 3510843 | 966 | - | 0.52795 |
yhcH | SSO_3362 | conserved hypothetical protein | chromosome | CDS | 3540751 | 465 | - | 0.486022 |
yhcI | SSO_3363 | putative NAGC-like transcriptional regulator | chromosome | CDS | 3541212 | 909 | - | 0.576458 |
yhcJ | SSO_3364 | putative enzyme | chromosome | CDS | 3542084 | 690 | - | 0.576812 |
yhfC | SSO_3495 | putative transport | chromosome | CDS | 3654567 | 1182 | + | 0.513536 |
yhfP | SSO_3504 | conserved hypothetical protein | chromosome | CDS | 3665116 | 711 | + | 0.537271 |
yhfQ | SSO_3505 | putative kinase | chromosome | CDS | 3665944 | 786 | + | 0.573791 |
yhfU | SSO_3509 | conserved hypothetical protein | chromosome | CDS | 3670125 | 393 | - | 0.465649 |
yhhS | SSO_3711 | putative transport | chromosome | CDS | 3887785 | 1260 | - | 0.55873 |
yhiM | SSO_3726 | conserved hypothetical protein | chromosome | CDS | 3906269 | 975 | + | 0.477949 |
yhjE | SSO_3868 | putative transport protein | chromosome | CDS | 4074964 | 1323 | - | 0.560091 |
yhjM | SSO_3860 | putative endoglucanase | chromosome | CDS | 4060793 | 1107 | + | 0.545619 |
yhjX | SSO_3843 | putative resistance protein | chromosome | CDS | 4035245 | 1209 | + | 0.512821 |
yibO | SSO_3793 | putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | chromosome | CDS | 3978659 | 1545 | - | 0.531392 |
yicJ | SSO_3746 | putative permease | chromosome | CDS | 3928958 | 1224 | + | 0.498366 |
yicM | SSO_3615 | putative transport protein | chromosome | CDS | 3783260 | 1263 | - | 0.526524 |
yidG | SSO_3629 | conserved hypothetical protein | chromosome | CDS | 3798624 | 363 | - | 0.504132 |
yidY | SSO_3554 | putative transport protein | chromosome | CDS | 3722402 | 1176 | + | 0.526361 |
yieC | SSO_3915 | putative receptor protein | chromosome | CDS | 4134352 | 1617 | + | 0.450216 |
yieO | SSO_3924 | putative transport protein | chromosome | CDS | 4145626 | 1428 | - | 0.492997 |
yigM | SSO_4001 | conserved hypothetical protein | chromosome | CDS | 4225166 | 900 | + | 0.553333 |
yihT | SSO_4049 | putative aldolase | chromosome | CDS | 4282801 | 888 | + | 0.51464 |
yihV | SSO_4047 | putative kinase | chromosome | CDS | 4280922 | 804 | - | 0.506219 |
yihW | SSO_4045 | putative DEOR-type transcriptional regulator | chromosome | CDS | 4278563 | 789 | - | 0.499366 |
yijE | SSO_4117 | conserved hypothetical protein | chromosome | CDS | 4355717 | 939 | + | 0.539936 |
yjfF | SSO_4412 | putative transport system permease protein | chromosome | CDS | 4680107 | 972 | + | 0.530864 |
yjfQ | SSO_4373 | putative DEOR-type transcriptional regulator | chromosome | CDS | 4642947 | 756 | - | 0.506614 |
yliI | SSO_0820 | putative dehydrogenase | chromosome | CDS | 874280 | 1116 | + | 0.518817 |
ynfM | SSO_1568 | putative transport protein | chromosome | CDS | 1647191 | 1254 | - | 0.5311 |
yphB | SSO_2627 | conserved hypothetical protein | chromosome | CDS | 2777794 | 873 | - | 0.549828 |
yphD | SSO_2629 | putative transport system permease protein | chromosome | CDS | 2779805 | 999 | - | 0.556557 |
yphE | SSO_2630 | putative ATP-binding component of a transport system | chromosome | CDS | 2780828 | 1512 | - | 0.554894 |
yphF | SSO_2631 | putative LACI-type transcriptional regulator | chromosome | CDS | 2782362 | 984 | - | 0.455285 |
yqcE | SSO_2927 | putative transport protein | chromosome | CDS | 3066460 | 1278 | + | 0.495305 |
yraO | SSO_3295 | conserved hypothetical protein | chromosome | CDS | 3472622 | 591 | + | 0.50423 |
yraR | SSO_3298 | conserved hypothetical protein | chromosome | CDS | 3475024 | 681 | - | 0.552129 |
ytfF | SSO_4395 | putative transmembrane subunit | chromosome | CDS | 4659109 | 975 | - | 0.553846 |
ytfG | SSO_4397 | putative oxidoreductase | chromosome | CDS | 4660182 | 861 | - | 0.538908 |
ytfQ | SSO_4409 | putative LACI-type transcriptional regulator | chromosome | CDS | 4676462 | 957 | + | 0.501567 |
ytfR | SSO_4410 | putative ATP-binding component of a transport system | chromosome | CDS | 4677558 | 1503 | + | 0.55489 |
ytfT | SSO_4411 | putative transport system permease protein | chromosome | CDS | 4679071 | 1026 | + | 0.573099 |
zwf | SSO_1296 | glucose-6-phosphate dehydrogenase | chromosome | CDS | 1371985 | 1476 | + | 0.515583 |