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2024-05-16 19:21:10

Gene list

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COG category: Carbohydrate transport and metabolism
Genomic element: megaplasmid

Number of genes found: 32

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Silicibacter pomeroyi DSS-3, DSS-3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPOA0347 membrane protein, putativemegaplasmid CDS388947 1188 + 0.632997
NA SPOA0148 membrane protein, major facilitator transporter familymegaplasmid CDS159056 1158 - 0.684801
NA SPOA0255 sugar ABC transporter, ATP binding proteinmegaplasmid CDS279491 762 - 0.608924
NA SPOA0279 TRAP dicarboxylate transporter, DctQ subunitmegaplasmid CDS307118 510 - 0.652941
NA SPOA0238 TRAP dicarboxylate transporter, DctP subunitmegaplasmid CDS261428 1014 + 0.646943
NA SPOA0249 TRAP dicarboxylate transporter, DctP subunitmegaplasmid CDS273143 978 - 0.597137
NA SPOA0278 TRAP dicarboxylate transporter, DctM subunitmegaplasmid CDS305817 1302 - 0.631336
NA SPOA0374 TRAP dicarboxylate transporter, DctP subunitmegaplasmid CDS418331 1041 - 0.6244
NA SPOA0241 gluconolactonase, putativemegaplasmid CDS264766 924 - 0.59632
NA SPOA0256 ribose ABC transporter, periplasmic ribose-binding proteinmegaplasmid CDS280380 1047 - 0.603629
NA SPOA0372 TRAP dicarboxylate transporter, DctQ subunitmegaplasmid CDS416293 564 - 0.58156
NA SPOA0335 TRAP dicarboxylate family transporter, DctP subunitmegaplasmid CDS376203 1020 - 0.601961
NA SPOA0349 membrane protein, putativemegaplasmid CDS391276 960 - 0.678125
NA SPOA0240 TRAP transporter, DctM subunitmegaplasmid CDS263144 1401 + 0.657388
NA SPOA0108 membrane protein, putativemegaplasmid CDS108335 1215 + 0.606584
NA SPOA0210 integral membrane proteinmegaplasmid CDS231416 840 - 0.671429
NA SPOA0373 TRAP dicarboxylate transporter, DctM subunitmegaplasmid CDS416936 1290 - 0.613953
NA SPOA0161 TRAP dicarboxylate transporter, DctQ subunitmegaplasmid CDS177386 492 - 0.595528
NA SPOA0253 ribose ABC transporter, periplasmic ribose-binding proteinmegaplasmid CDS277117 1131 - 0.587975
NA SPOA0332 dihydroxy-acid dehydratase, putativemegaplasmid CDS372441 1797 - 0.599889
NA SPOA0251 TRAP dicarboxylate transporter, DctQ subunitmegaplasmid CDS275421 549 - 0.57377
NA SPOA0280 TRAP dicarboxylate transporter, DctP subunit, putativemegaplasmid CDS307702 996 - 0.63755
NA SPOA0331 2-dehydro-3-deoxygluconokinase, putativemegaplasmid CDS371484 948 - 0.587553
NA SPOA0431 tetracycline resistance proteinmegaplasmid CDS478537 1200 - 0.655
NA SPOA0250 TRAP dicarboxylate transporter, DctM subunitmegaplasmid CDS274138 1281 - 0.590164
cscK SPOA0276 fructokinasemegaplasmid CDS304052 942 - 0.728238
eda-2 SPOA0330 2-dehydro-3-deoxyphosphogluconate aldolasemegaplasmid CDS370846 660 - 0.621212
mgsA SPOA0329 methylglyoxal synthasemegaplasmid CDS370463 390 - 0.546154
nirS SPOA0220 cytochrome cd1 nitrite reductasemegaplasmid CDS242141 1695 + 0.624779
rbsA SPOA0258 ribose ABC transporter, ATP-binding proteinmegaplasmid CDS282480 1506 - 0.600266
rbsC-1 SPOA0254 ribose ABC transporter, permease proteinmegaplasmid CDS278352 1128 - 0.597518
rbsC-2 SPOA0257 ribose ABC transporter, permease proteinmegaplasmid CDS281449 1020 - 0.584314