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2024-05-18 23:56:11

Gene list

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COG category: Carbohydrate transport and metabolism
Genomic element: chromosome 1

Number of genes found: 164

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA3098 hypothetical cell shape-determining proteinchromosome 1 CDS3538789 420 - 0.416667
NA PBPRA2068 hypothetical proteinchromosome 1 CDS2381528 897 - 0.358974
NA PBPRA1646 conservaed hypothetical proteinchromosome 1 CDS1875679 942 - 0.406582
NA PBPRA0632 putative phosphopentomutasechromosome 1 CDS691924 1221 + 0.447174
NA PBPRA0990 Hypothetical transporterchromosome 1 CDS1094452 936 + 0.426282
NA PBPRA0235 putative triosephosphate isomerasechromosome 1 CDS241320 789 - 0.463878
NA PBPRA2718 hypothetical proteinchromosome 1 CDS3154152 807 - 0.451053
NA PBPRA3333 hypothetical proteinchromosome 1 CDS3783453 363 - 0.292011
NA PBPRA2255 hypothetical maltoporinchromosome 1 CDS2598612 1266 + 0.464455
NA PBPRA1438 hypothetical proteinchromosome 1 CDS1613157 1188 + 0.388889
NA PBPRA2284 hypothetical glucose kinasechromosome 1 CDS2629739 879 - 0.439135
NA PBPRA3122 putative ribose-5-phosphate isomerasechromosome 1 CDS3558149 660 + 0.440909
NA PBPRA3595 Putative dihydroxy-acid dehydratasechromosome 1 CDS4063577 1899 + 0.467088
NA PBPRA0890 hypothetical proteinchromosome 1 CDS987397 465 - 0.322581
AGR_C_28 PBPRA0480 putative beta-mannosidase precursorchromosome 1 CDS506166 2439 + 0.447314
ALL3964 PBPRA0516 putative phosphoglucomutase/phosphomannomutasechromosome 1 CDS541673 1413 - 0.389243
AMPG PBPRA0815 putative ampG proteinchromosome 1 CDS903125 1389 - 0.431965
ATU1040 PBPRA2321 putative MFS transporterchromosome 1 CDS2672450 1239 + 0.447942
ATU2337 PBPRA2307 putative permease of the drug/metabolite transporter (DMT) superfamilychromosome 1 CDS2655404 906 - 0.449227
BA5448 PBPRA0496 putative Phosphotransferase system cellobiose-specific component IICchromosome 1 CDS523486 1329 + 0.448457
BLR8122 PBPRA1061 hypothetical diadenosine tetraphosphate hydrolasechromosome 1 CDS1178435 429 - 0.433566
C3062 PBPRA3400 putative transport permease proteinchromosome 1 CDS3849418 1227 - 0.458843
C3964 PBPRA3257 putative nitrogen regulatory IIA protein PtsNchromosome 1 CDS3690181 432 + 0.407407
CELA PBPRA2776 putative PTS system, cellobiose-specific IIBcomponentchromosome 1 CDS3221897 318 + 0.371069
CEPA PBPRA0517 putative N,N-diacetylchitobiose phosphorylasechromosome 1 CDS543150 2406 - 0.430175
CHB PBPRA0518 hypothetical N-acetyl-beta-hexosaminidasechromosome 1 CDS545595 1932 - 0.43323
CHIA PBPRA2199 Hypothetical protein with chitinase domainchromosome 1 CDS2529673 1380 + 0.460145
CHID PBPRA2198 putative chitinasechromosome 1 CDS2527805 1821 + 0.447007
CV2676 PBPRA1722 hypothetical endoglucanase precursorchromosome 1 CDS1970919 1110 + 0.404505
CV3709 PBPRA2022 Hypothetical proteinchromosome 1 CDS2333736 906 - 0.407285
EBGC PBPRA2085 putative evolved beta-D-galactosidase, beta subunit; cryptic genechromosome 1 CDS2404119 453 + 0.448124
ECS4002 PBPRA3190 putative glycerate kinasechromosome 1 CDS3618296 1137 + 0.473175
ECS4055 PBPRA0606 putative phosphoglucomutase/phosphomannomutasefamily protein MrsAchromosome 1 CDS663661 1104 + 0.430254
ECS4406 PBPRA1275 Hypothetical 2-dehydro-3-deoxygluconokinasechromosome 1 CDS1447013 921 + 0.428882
ENO PBPRA3079 putative enolasechromosome 1 CDS3516160 1302 - 0.454685
FRUB PBPRA1573 Putative PTS system, fructose-specific IIA/FPR componentchromosome 1 CDS1791073 1119 + 0.436104
GA2 PBPRA1879 conserved hypothetical proteinchromosome 1 CDS2164041 360 - 0.397222
GALK PBPRA2080 putative galactokinasechromosome 1 CDS2395560 1203 - 0.414796
GALM PBPRA2079 hypothetical aldose 1-epimerasechromosome 1 CDS2394450 1101 - 0.423252
GALM PBPRA0459 hypothetical proteinchromosome 1 CDS480635 1026 + 0.438596
GLPF PBPRA0249 putative glycerol uptake facilitator proteinchromosome 1 CDS255880 855 - 0.450292
GND PBPRA1444 putative 6-phosphogluconate dehydrogenase,decarboxylatingchromosome 1 CDS1620181 1500 + 0.446
HD0836 PBPRA1443 putative DevB proteinchromosome 1 CDS1619504 717 + 0.423989
HD0838 PBPRA1442 putative glucose-6-phosphate 1-dehydrogenasechromosome 1 CDS1618002 1500 + 0.412
HD1852 PBPRA2285 putative N-acetylmannosamine-6-phosphate 2-epimerasechromosome 1 CDS2630614 708 - 0.466102
MGSA PBPRA1230 putative methylglyoxal synthasechromosome 1 CDS1389668 540 - 0.392593
MLC PBPRA2332 putative transcriptional regulator, ROK familychromosome 1 CDS2684635 1215 - 0.407407
MW0197 PBPRA2348 putative sugar phosphate permeasechromosome 1 CDS2706096 1458 - 0.423868
NAGC PBPRA1029 putative N-acetylglucosamine repressorchromosome 1 CDS1142297 1215 - 0.420576
PA4034 PBPRA1295 putative aquaporin Zchromosome 1 CDS1470067 759 - 0.4361
PAB0461 PBPRA0114 conserved hypothetical proteinchromosome 1 CDS117455 903 - 0.466224
PD1041 PBPRA1465 steroid dehydrogenasechromosome 1 CDS1657324 1116 + 0.443548
PFKA PBPRA0234 putative 6-phosphofructokinasechromosome 1 CDS240156 963 + 0.466251
PGI PBPRA3328 putative Glucose-6-phosphate isomerasechromosome 1 CDS3776305 1653 - 0.411373
PGK PBPRA3131 putative phosphoglycerate kinasechromosome 1 CDS3566003 1179 - 0.444444
PLU0178 PBPRA1276 putative2-keto-3-deoxy-6-phosphogluconatealdolas echromosome 1 CDS1447947 633 + 0.42654
PLU0957 PBPRA3130 putative fructose-bisphosphate aldolase, class IIchromosome 1 CDS3564781 1077 - 0.439183
PLU1324 PBPRA1033 putative beta-N-acetylhexosaminidasechromosome 1 CDS1147302 2739 + 0.428624
PLU1392 PBPRA0861 putative PTS system, glucose-specific IIAcomponentchromosome 1 CDS948601 510 - 0.415686
PLU2275 PBPRA0457 putative D-xylose isomerasechromosome 1 CDS477500 1392 - 0.4375
PLU2317 PBPRA1669 hypothetical proteinchromosome 1 CDS1916238 1269 - 0.427896
PLU2757 PBPRA0497 putative 6-phospho-beta-glucosidasechromosome 1 CDS524884 1314 + 0.445967
PLU4045 PBPRA3259 putative phosphocarrier protein NPrchromosome 1 CDS3691497 276 + 0.423913
PMT1397 PBPRA0627 putative glycogen operon proteinchromosome 1 CDS684177 2121 + 0.442716
PPNK PBPRA0695 putative sugar kinasechromosome 1 CDS770592 882 - 0.447846
PRO1576 PBPRA2207 putative transporterchromosome 1 CDS2539619 1290 - 0.427907
PRO1577 PBPRA2208 putative glyceraldehyde 3-phosphate dehydrogenasechromosome 1 CDS2540958 1020 - 0.42549
PSPTO210 PBPRA1724 putative glyceraldehyde 3-phosphatedehydrogenasechromosome 1 CDS1975910 1440 - 0.411806
PSPTO408 PBPRA0124 putative MadN proteinchromosome 1 CDS126847 876 - 0.428082
PTS-EIIB PBPRA2052 hypothetical PTS system, cellobiose-specific IIB componentchromosome 1 CDS2368116 336 + 0.401786
PTS18CBA PBPRA1032 putative PTS permease for N-acetylglucosamine and glucosechromosome 1 CDS1145725 1491 + 0.441985
PTS3C PBPRA2777 hypothetical phosphotransferase systemcellobiose-specific component IICchromosome 1 CDS3222232 1326 + 0.433635
PYKA PBPRA2431 putative pyruvate kinase IIchromosome 1 CDS2815722 1458 + 0.439643
R00200 PBPRA0519 putative N-acetylglucosamine kinasechromosome 1 CDS547536 888 - 0.453829
RB1169 PBPRA2263 putative polysaccharide deacetylase family proteinchromosome 1 CDS2605957 924 - 0.448052
RS02191 PBPRA0462 putative xylose binding periplasmic protein of ABC transport systemchromosome 1 CDS485799 996 + 0.431727
RS02192 PBPRA0463 putative D-xylose transport ATP-binding protein xylGchromosome 1 CDS486875 1524 + 0.437664
RSP1635 PBPRA0464 putative inner membrane permease of D-xyloseABC transporterchromosome 1 CDS488398 1176 + 0.462585
S0616 PBPRA1040 putative phosphoglucomutasechromosome 1 CDS1155703 1647 + 0.435944
S3323 PBPRA2084 putative evolved beta-D-galactosidase, alpha subunitchromosome 1 CDS2401125 2994 + 0.414162
S4109 PBPRA0220 putative ADP glyceromanno-heptose 6-epimerase GmhDchromosome 1 CDS227211 945 - 0.42963
S4161 PBPRA0467 putative xylulose kinasechromosome 1 CDS491096 1452 + 0.458678
S4512 PBPRA1224 putative PTS system, trehalose-specific IIBCcomponentchromosome 1 CDS1379158 1443 + 0.449757
SAV2641 PBPRA2719 putative phosphotransferase system fructose-specific component IIBchromosome 1 CDS3154960 303 - 0.445545
SC5G9.02 PBPRA0461 putative xylosidasechromosome 1 CDS483054 2361 + 0.453198
SCO4896 PBPRA1368 putative multidrug resistance proteinchromosome 1 CDS1537425 1347 + 0.439495
SF0422 PBPRA1908 putative inosine-guanosine kinasechromosome 1 CDS2194890 1305 + 0.42682
SF1105 PBPRA1203 Putative PTS system, glucose-specific IIBCchromosome 1 CDS1351645 1434 + 0.445607
SF1284 PBPRA2447 putative N-acetylglucosaminyl transferasechromosome 1 CDS2832108 1170 - 0.435897
SF1505 PBPRA2174 conserved hypothetical proteinchromosome 1 CDS2499372 891 + 0.415264
SF2252 PBPRA1575 PTS system, fructose-specific IIBC componentchromosome 1 CDS1793244 1740 + 0.441379
SMA1406 PBPRA2272 putative hydroxypyruvate reductasechromosome 1 CDS2615973 1308 - 0.441132
SMB20295 PBPRA2281 putative TRAP-type C4-dicarboxylate transport system, periplasmic componentchromosome 1 CDS2626152 969 - 0.390093
SMB20297 PBPRA2279 putative TRAP-type C4-dicarboxylate transport system, large permease componentchromosome 1 CDS2624252 1284 - 0.386293
SMC01729 PBPRA1649 Hypothetical proteinchromosome 1 CDS1878457 330 - 0.421212
SO3905 PBPRA3323 hypothetical proteinchromosome 1 CDS3772474 651 - 0.447005
SPS0115 PBPRA2231 hypothetical regulatory protein PfoRchromosome 1 CDS2571438 1023 + 0.44086
SRLR PBPRA3600 Putative transcriptional regulator, DeoR familychromosome 1 CDS4070230 792 - 0.438131
STM1349 PBPRA1751 putative phosphoenolpyruvate synthasechromosome 1 CDS2007327 2364 + 0.436125
STM2283 PBPRA0158 putative glycerol-3-phosphate transporterchromosome 1 CDS159736 1371 + 0.452954
STM3268 PBPRA2612 hypothetical proteinchromosome 1 CDS3026505 714 + 0.428571
STM3483 PBPRA0284 putative ribulose-phosphate 3-epimerasechromosome 1 CDS299052 663 + 0.441931
STM3523 PBPRA0159 putative glycerol-3-phosphate repressor proteinchromosome 1 CDS161204 780 + 0.457692
STM4085 PBPRA0240 putative GlpX proteinchromosome 1 CDS244912 1074 - 0.461825
STM4453 PBPRA1225 putative trehalose-6-phosphate hydrolasechromosome 1 CDS1380685 1683 + 0.411171
STY0671 PBPRA2293 putative citrate lyase, beta subunitchromosome 1 CDS2641735 891 - 0.448934
STY1799 PBPRA2778 putative PTS system, cellobiose-specific IIAcomponentchromosome 1 CDS3223560 339 + 0.412979
STY3228 PBPRA3132 putative erythrose-4-phosphate dehydrogenasechromosome 1 CDS3567239 1170 - 0.417949
STY3481 PBPRA0396 putative membrane proteinchromosome 1 CDS398013 927 + 0.425027
STY3515 PBPRA2282 conserved hypothetical proteinchromosome 1 CDS2627566 492 - 0.367886
STY3981 PBPRA1521 putative multidrug resistance protein Dchromosome 1 CDS1721434 1209 + 0.432589
SUHB PBPRA0747 putative inositol monophosphate family proteinchromosome 1 CDS828477 801 - 0.449438
T0366 PBPRA3189 putative permeasechromosome 1 CDS3617018 1266 + 0.496051
T1296 PBPRA2121 Hypothetical transport proteinchromosome 1 CDS2439892 1209 + 0.421009
T1700 PBPRA1747 Putative ROK family proteinchromosome 1 CDS2002480 912 + 0.424342
T2192 PBPRA1030 putativeN-acetylglucosamine-6-phosphatedeacetyla sechromosome 1 CDS1143515 1143 - 0.434821
T2462 PBPRA1726 putative maltodextrin glucosidasechromosome 1 CDS1979354 1866 - 0.417471
T3186 PBPRA3229 putative phosphoheptose isomerasechromosome 1 CDS3667456 591 + 0.439932
T3693 PBPRA1231 hypothetical periplasmic protein TorTchromosome 1 CDS1390269 1095 - 0.408219
T4469 PBPRA0384 putative fructose-1,6-bisphosphatasechromosome 1 CDS384856 1035 - 0.421256
UHPC PBPRA2345 putative UhpC, sugar phosphate permeasechromosome 1 CDS2702270 1338 - 0.431241
VC1280 PBPRA0494 putative deacetylase DA1chromosome 1 CDS521400 1308 - 0.415138
VC1281 PBPRA0495 phosphotransferase system cellobiose-specific component IIBchromosome 1 CDS523124 111 + 0.477477
VC1778 PBPRA2280 putative TRAP-type C4-dicarboxylate transport system, small permease componentchromosome 1 CDS2625545 513 - 0.37232
VCA0379 PBPRA1632 hypothetical proteinchromosome 1 CDS1863755 330 + 0.4
VPA0032 PBPRA2037 putative ABC transporterchromosome 1 CDS2353689 858 - 0.38345
VPA0934 PBPRA1209 Conserved hypothetical proteinchromosome 1 CDS1358290 543 - 0.430939
VPA1081 PBPRA2693 conserved hypothetical proteinchromosome 1 CDS3124965 297 + 0.316498
VPA1184 PBPRA1886 hypothetical drug transport transmembrane proteinchromosome 1 CDS2170660 1203 + 0.41729
VV20582 PBPRA1688 putative transporterchromosome 1 CDS1933615 897 - 0.437012
VV20591 PBPRA1268 hypothetical proteinchromosome 1 CDS1436831 2421 - 0.427922
VV2518 PBPRA2913 putative phosphoheptose isomerasechromosome 1 CDS3343478 579 - 0.412781
VVA0028 PBPRA1031 Putative glucosamine-6-phosphate isomerasechromosome 1 CDS1144668 801 - 0.384519
VVA0188 PBPRA2715 putative PTS system, fructose-specific IIABC componentchromosome 1 CDS3149134 1896 - 0.483122
VVA0192 PBPRA2055 putative PTS system, fructose-specific IIABC componentchromosome 1 CDS2370645 1908 + 0.424004
VVA1136 PBPRA3006 hypothetical multidrug resistance proteinchromosome 1 CDS3448198 1197 - 0.441103
WBGZ PBPRA2698 putative mannosyl-transferasechromosome 1 CDS3127191 1905 + 0.394751
WBPV PBPRA2699 hypothetical nucleoside-diphosphate-sugar epimerasechromosome 1 CDS3129127 945 - 0.371429
WCFX PBPRA2676 putative nucleotide sugar epimerasechromosome 1 CDS3104767 1008 - 0.363095
WS0025 PBPRA0207 putative nucleotide sugar epimerasechromosome 1 CDS214187 1005 + 0.444776
WS2061 PBPRA2711 hypothetical polysaccharide biosynthesis proteinchromosome 1 CDS3144083 1014 - 0.374753
XCC0748 PBPRA1292 putative alpha-amylasechromosome 1 CDS1463513 1425 - 0.447719
XCC3357 PBPRA2340 hypothetical transport proteinchromosome 1 CDS2696791 1407 - 0.432125
Y1487 PBPRA0862 Putativephosphoenolpyruvate-proteinphosphotransferasechromosome 1 CDS949151 1728 - 0.421875
Y1488 PBPRA0863 putative phosphocarrier protein HPrchromosome 1 CDS950931 258 - 0.418605
Y1767 PBPRA1760 putative PTS system, glucose-specific IIBCcomponentchromosome 1 CDS2022424 1389 - 0.423326
Y1770 PBPRA2403 putative Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolaseschromosome 1 CDS2775127 351 - 0.418803
Y1944 PBPRA0428 putative pyruvate kinase Ichromosome 1 CDS441531 1413 - 0.420382
Y2165 PBPRA2602 putative glyceraldehyde 3-phosphate dehydrogenasechromosome 1 CDS3013549 1101 + 0.420527
Y2617 PBPRA2429 Hypothetical enzyme of sugar metabolismchromosome 1 CDS2813129 834 - 0.398082
Y2886 PBPRA1574 Putative 1-phosphofructokinasechromosome 1 CDS1792194 1029 + 0.449951
Y3310 PBPRA3133 putative transketolase 1chromosome 1 CDS3568597 2013 - 0.487829
YBJT PBPRA1551 hypothetical nucleoside-diphosphate-sugar epimerasechromosome 1 CDS1759026 1470 - 0.441497
YHFW PBPRA2782 hypothetical mutasechromosome 1 CDS3228209 1227 - 0.481663
YIBO PBPRA0224 putative phosphoglycerate mutase, 2,3-bisphosphoglycerate-independentchromosome 1 CDS231277 1557 - 0.453436
YPO2148 PBPRA0113 putative multidrug resistance proteinchromosome 1 CDS116135 1221 + 0.461097
YPO2263 PBPRA2716 putative mannose-6-phosphate isomerchromosome 1 CDS3151643 1206 - 0.442786
YPO3095 PBPRA1026 Putative inosine-guanosine kinasechromosome 1 CDS1136996 1305 + 0.435249
Z0662 PBPRA2274 putative hydroxypyruvate isomerasechromosome 1 CDS2618510 798 - 0.428571
Z2820 PBPRA2603 hypothetical proteinchromosome 1 CDS3014991 876 + 0.405251
Z3441 PBPRA1545 putative multidrug resistance proteinchromosome 1 CDS1752176 1215 + 0.432922
Z3441 PBPRA1548 hypothetical proteinchromosome 1 CDS1755558 591 + 0.423012
Z5085 PBPRA0458 putative permeasechromosome 1 CDS479197 1344 + 0.416667
Z5410 PBPRA3032 putative membrane proteinchromosome 1 CDS3474679 1293 + 0.422274