Gene list
Applied filters:
COG category: Carbohydrate transport and metabolism
Genomic element: chromosome I
Number of genes found: 129
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Vibrio cholerae O1 biovar eltor str. N16961, N16961 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
VC0028 | dihydroxy-acid dehydratase | chromosome I | CDS | 24792 | 1842 | - | 0.547231 | |
VC0069 | multidrug resistance protein, putative | chromosome I | CDS | 69296 | 1203 | + | 0.501247 | |
VC0075 | MadN protein | chromosome I | CDS | 75266 | 888 | - | 0.483108 | |
VC0081 | conserved hypothetical protein | chromosome I | CDS | 79052 | 912 | - | 0.506579 | |
VC0207 | PTS system, sucrose-specific IIBC component, putative | chromosome I | CDS | 214449 | 1449 | + | 0.518979 | |
VC0239 | conserved hypothetical protein | chromosome I | CDS | 243212 | 1773 | - | 0.452341 | |
VC0240 | ADP-L-glycero-D-mannoheptose-6-epimerase | chromosome I | CDS | 245143 | 945 | - | 0.461376 | |
VC0242 | phosphomannomutase | chromosome I | CDS | 247929 | 1392 | + | 0.386494 | |
VC0246 | lipopolysaccharide/O-antigen transport protein | chromosome I | CDS | 252918 | 795 | + | 0.348428 | |
VC0247 | lipopolysaccharide/O-antigen transport protein | chromosome I | CDS | 253651 | 816 | + | 0.363971 | |
VC0260 | mannosyl-transferase | chromosome I | CDS | 265374 | 1866 | - | 0.435155 | |
VC0262 | UDP-glucose 4-epimerase | chromosome I | CDS | 267392 | 972 | + | 0.450617 | |
VC0269 | mannose-6-phosphate isomerase | chromosome I | CDS | 274509 | 1200 | + | 0.4125 | |
VC0270 | ROK family protein | chromosome I | CDS | 275674 | 981 | + | 0.442406 | |
VC0285 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase | chromosome I | CDS | 294219 | 606 | - | 0.551155 | |
VC0286 | gluconate permease, putative | chromosome I | CDS | 294837 | 1377 | - | 0.547567 | |
VC0287 | thermoresistant gluconokinase | chromosome I | CDS | 296367 | 516 | + | 0.501938 | |
VC0288 | phosphogluconate dehydratase | chromosome I | CDS | 296819 | 1857 | + | 0.542273 | |
VC0302 | conserved hypothetical protein | chromosome I | CDS | 309994 | 1191 | + | 0.534845 | |
VC0336 | phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | chromosome I | CDS | 354684 | 1533 | - | 0.510763 | |
VC0337 | conserved hypothetical protein | chromosome I | CDS | 356359 | 942 | - | 0.524416 | |
VC0374 | glucose-6-phosphate isomerase | chromosome I | CDS | 389886 | 1653 | + | 0.488808 | |
VC0425 | hypothetical protein | chromosome I | CDS | 455459 | 798 | + | 0.496241 | |
VC0473 | transketolase 1 | chromosome I | CDS | 501605 | 2085 | + | 0.534293 | |
VC0476 | D-erythrose 4-phosphate dehydrogenase | chromosome I | CDS | 506780 | 1158 | + | 0.463731 | |
VC0477 | phosphoglycerate kinase | chromosome I | CDS | 508071 | 1179 | + | 0.489398 | |
VC0478 | fructose-bisphosphate aldolase, class II | chromosome I | CDS | 509405 | 1077 | + | 0.471681 | |
VC0485 | pyruvate kinase I | chromosome I | CDS | 514732 | 1413 | - | 0.475584 | |
VC0486 | transcriptional regulator, DeoR family | chromosome I | CDS | 516560 | 783 | + | 0.452107 | |
VC0579 | phosphoheptose isomerase, putative | chromosome I | CDS | 608662 | 591 | - | 0.475465 | |
VC0611 | phosphoglucomutase/phosphomannomutase, putative | chromosome I | CDS | 642814 | 1413 | - | 0.491861 | |
VC0612 | cellobiose/cellodextrin-phosphorylase, putative | chromosome I | CDS | 644349 | 2406 | - | 0.504988 | |
VC0613 | beta-N-acetylhexosaminidase | chromosome I | CDS | 646873 | 1914 | - | 0.50209 | |
VC0614 | conserved hypothetical protein | chromosome I | CDS | 648783 | 978 | - | 0.527607 | |
VC0639 | phosphoglucomutase/phosphomannomutase family protein MrsA | chromosome I | CDS | 680988 | 1341 | + | 0.478002 | |
VC0689 | conserved hypothetical protein | chromosome I | CDS | 735892 | 1800 | + | 0.508889 | |
VC0692 | beta-hexosaminidase | chromosome I | CDS | 739874 | 993 | + | 0.523666 | |
VC0745 | inositol monophosphate family protein | chromosome I | CDS | 798822 | 867 | - | 0.478662 | |
VC0798 | citrate lyase, beta subunit | chromosome I | CDS | 854565 | 891 | + | 0.547699 | |
VC0853 | conserved hypothetical protein | chromosome I | CDS | 918527 | 885 | - | 0.468927 | |
VC0910 | PTS system, trehalose-specific IIBC component | chromosome I | CDS | 969788 | 1437 | + | 0.499652 | |
VC0911 | trehalose-6-phosphate hydrolase | chromosome I | CDS | 971304 | 1689 | + | 0.470693 | |
VC0964 | PTS system, glucose-specific IIA component | chromosome I | CDS | 1029142 | 510 | - | 0.454902 | |
VC0965 | phosphoenolpyruvate-protein phosphotransferase | chromosome I | CDS | 1029760 | 1722 | - | 0.461672 | |
VC0966 | phosphocarrier protein HPr | chromosome I | CDS | 1031615 | 258 | - | 0.465116 | |
VC0993 | N-acetylglucosamine repressor | chromosome I | CDS | 1058502 | 1215 | - | 0.469136 | |
VC0994 | N-acetylglucosamine-6-phosphate deacetylase | chromosome I | CDS | 1059719 | 1137 | - | 0.458223 | |
VC0995 | PTS system, N-acetylglucosamine-specific IIABC component | chromosome I | CDS | 1061324 | 1572 | + | 0.489822 | |
VC1069 | glyceraldehyde 3-phosphate dehydrogenase | chromosome I | CDS | 1136296 | 1002 | + | 0.48004 | |
VC1071 | transporter, putative | chromosome I | CDS | 1137847 | 1236 | + | 0.507282 | |
VC1123 | hypothetical protein | chromosome I | CDS | 1191714 | 540 | + | 0.488889 | |
VC1129 | inosine-guanosine kinase | chromosome I | CDS | 1196815 | 1305 | + | 0.429119 | |
VC1240 | alpha-ribazole-5`-phosphate phosphatase CobC, putative | chromosome I | CDS | 1313900 | 603 | + | 0.52073 | |
VC1261 | conserved hypothetical protein | chromosome I | CDS | 1335279 | 1215 | + | 0.485597 | |
VC1281 | PTS system, cellobiose-specific IIB component | chromosome I | CDS | 1356926 | 306 | + | 0.408497 | |
VC1282 | PTS system, cellobiose-specific IIC component | chromosome I | CDS | 1357310 | 1341 | + | 0.457122 | |
VC1283 | PTS system, cellobiose-specific IIA component | chromosome I | CDS | 1358697 | 336 | + | 0.428571 | |
VC1284 | 6-phospho-beta-glucosidase | chromosome I | CDS | 1359014 | 1323 | + | 0.464097 | |
VC1325 | galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein | chromosome I | CDS | 1409080 | 975 | + | 0.501538 | |
VC1327 | galactoside ABC transporter, ATP-binding protein | chromosome I | CDS | 1410224 | 1545 | + | 0.462783 | |
VC1328 | galactoside ABC transporter, permease protein | chromosome I | CDS | 1411773 | 1014 | + | 0.476331 | |
VC1333 | hypothetical protein | chromosome I | CDS | 1416672 | 552 | - | 0.485507 | |
VC1336 | carboxyphosphonoenolpyruvate phosphonomutase | chromosome I | CDS | 1419710 | 927 | + | 0.523193 | |
VC1391 | multidrug transporter, putative | chromosome I | CDS | 1481602 | 1407 | + | 0.52452 | |
VC1411 | multidrug resistance protein VceB | chromosome I | CDS | 1504292 | 1536 | + | 0.468099 | |
VC1532 | ROK family protein | chromosome I | CDS | 1644672 | 909 | - | 0.49725 | |
VC1539 | conserved hypothetical protein | chromosome I | CDS | 1650858 | 867 | + | 0.448674 | |
VC1549 | glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein | chromosome I | CDS | 1661257 | 1305 | + | 0.483525 | |
VC1550 | glycerol-3-phosphate ABC transporter, permease protein | chromosome I | CDS | 1662637 | 882 | + | 0.510204 | |
VC1551 | glycerol-3-phosphate ABC transporter, permease protein | chromosome I | CDS | 1663528 | 843 | + | 0.465006 | |
VC1552 | glycerol-3-phosphate ABC transporter, ATP-binding protein | chromosome I | CDS | 1664360 | 1182 | + | 0.497462 | |
VC1553 | glycerol-3-phosphate regulon repressor | chromosome I | CDS | 1665566 | 762 | + | 0.488189 | |
VC1555 | conserved hypothetical protein | chromosome I | CDS | 1667144 | 513 | - | 0.512671 | |
VC1558 | 6-phospho-beta-glucosidase | chromosome I | CDS | 1669192 | 1437 | - | 0.473208 | |
VC1594 | aldose 1-epimerase | chromosome I | CDS | 1705924 | 1053 | - | 0.51377 | |
VC1595 | galactokinase | chromosome I | CDS | 1706985 | 1218 | - | 0.519704 | |
VC1597 | multidrug transporter, putative | chromosome I | CDS | 1709719 | 1434 | - | 0.490237 | |
VC1618 | multidrug resistance protein, putative | chromosome I | CDS | 1730964 | 1218 | + | 0.498358 | |
VC1632 | conserved hypothetical protein | chromosome I | CDS | 1757297 | 1437 | + | 0.51009 | |
VC1634 | multidrug resistance protein | chromosome I | CDS | 1759459 | 1206 | - | 0.515755 | |
VC1656 | conserved hypothetical protein | chromosome I | CDS | 1788409 | 864 | - | 0.487269 | |
VC1690 | alpha-1,6-galactosidase, putative | chromosome I | CDS | 1823364 | 1125 | - | 0.504889 | |
VC1697 | conserved hypothetical protein | chromosome I | CDS | 1830805 | 831 | + | 0.494585 | |
VC1726 | glycogen synthase | chromosome I | CDS | 1863877 | 1455 | - | 0.487972 | |
VC1727 | glucose-1-phosphate adenylyltransferase | chromosome I | CDS | 1865333 | 1218 | - | 0.465517 | |
VC1777 | conserved hypothetical protein | chromosome I | CDS | 1927130 | 1284 | - | 0.453271 | |
VC1778 | conserved hypothetical protein | chromosome I | CDS | 1928421 | 522 | - | 0.411877 | |
VC1779 | C4-dicarboxylate-binding periplasmic protein | chromosome I | CDS | 1928993 | 966 | - | 0.44617 | |
VC1781 | conserved hypothetical protein | chromosome I | CDS | 1930173 | 723 | + | 0.471646 | |
VC1782 | ROK family protein | chromosome I | CDS | 1930883 | 864 | + | 0.450231 | |
VC1783 | N-acetylglucosamine-6-phosphate deacetylase | chromosome I | CDS | 1931750 | 1137 | + | 0.449428 | |
VC1784 | neuraminidase | chromosome I | CDS | 1933231 | 2424 | + | 0.451733 | |
VC1820 | PTS system, fructose-specific IIA component | chromosome I | CDS | 1961098 | 441 | + | 0.37415 | |
VC1821 | PTS system, fructose-specific IIBC component | chromosome I | CDS | 1961550 | 1404 | + | 0.497863 | |
VC1822 | PTS system, fructose-specific IIABC component | chromosome I | CDS | 1963028 | 1866 | - | 0.495177 | |
VC1823 | PTS system, fructose-specific IIB component | chromosome I | CDS | 1965110 | 300 | + | 0.493333 | |
VC1824 | PTS system, nitrogen regulatory IIA component, putative | chromosome I | CDS | 1965418 | 780 | + | 0.476923 | |
VC1826 | PTS system, fructose-specific IIABC component | chromosome I | CDS | 1967400 | 1902 | + | 0.50368 | |
VC1827 | mannose-6-phosphate isomerase | chromosome I | CDS | 1969417 | 1167 | + | 0.461011 | |
VC1897 | Hit family protein | chromosome I | CDS | 2043911 | 351 | - | 0.478632 | |
VC1912 | conserved hypothetical protein | chromosome I | CDS | 2061646 | 1170 | - | 0.454701 | |
VC1927 | C4-dicarboxylate transport protein | chromosome I | CDS | 2078993 | 1362 | - | 0.505874 | |
VC1928 | C4-dicarboxylate transport protein DctQ, putative | chromosome I | CDS | 2080358 | 699 | - | 0.466381 | |
VC1929 | C4-dicarboxylate-binding periplasmic protein | chromosome I | CDS | 2081087 | 999 | - | 0.487487 | |
VC1966 | conserved hypothetical protein | chromosome I | CDS | 2115867 | 1881 | + | 0.496013 | |
VC2000 | glyceraldehyde 3-phosphate dehydrogenase | chromosome I | CDS | 2152265 | 996 | + | 0.468875 | |
VC2001 | conserved hypothetical protein | chromosome I | CDS | 2153408 | 891 | + | 0.491582 | |
VC2007 | transcriptional regulator, ROK family | chromosome I | CDS | 2159327 | 1218 | - | 0.460591 | |
VC2008 | pyruvate kinase II | chromosome I | CDS | 2160989 | 1446 | + | 0.487552 | |
VC2013 | PTS system, glucose-specific IIBC component | chromosome I | CDS | 2166647 | 1503 | - | 0.477711 | |
VC2032 | hypothetical protein | chromosome I | CDS | 2186633 | 876 | + | 0.502283 | |
VC2075 | histidine triad family protein | chromosome I | CDS | 2232809 | 444 | + | 0.493243 | |
VC2095 | phosphoglucomutase | chromosome I | CDS | 2256154 | 1647 | - | 0.48816 | |
VC2217 | beta-N-acetylhexosaminidase | chromosome I | CDS | 2371485 | 2652 | - | 0.495475 | |
VC2230 | phosphoheptose isomerase | chromosome I | CDS | 2383272 | 576 | - | 0.456597 | |
VC2300 | ampG protein, putative | chromosome I | CDS | 2454099 | 1389 | + | 0.478762 | |
VC2348 | phosphopentomutase | chromosome I | CDS | 2504399 | 1221 | - | 0.505324 | |
VC2447 | enolase | chromosome I | CDS | 2626616 | 1302 | - | 0.480031 | |
VC2480 | ribose-5-phosphate isomerase | chromosome I | CDS | 2659090 | 657 | + | 0.494673 | |
VC2487 | conserved hypothetical protein | chromosome I | CDS | 2667410 | 1089 | - | 0.431589 | |
VC2531 | PTS system, nitrogen regulatory IIA component | chromosome I | CDS | 2713688 | 447 | + | 0.469799 | |
VC2533 | phosphocarrier protein NPr | chromosome I | CDS | 2715016 | 279 | + | 0.516129 | |
VC2544 | fructose-1,6-bisphosphatase | chromosome I | CDS | 2724901 | 1011 | + | 0.487636 | |
VC2566 | conserved hypothetical protein | chromosome I | CDS | 2748179 | 810 | + | 0.516049 | |
VC2625 | ribulose-phosphate 3-epimerase | chromosome I | CDS | 2796111 | 711 | - | 0.507736 | |
VC2670 | triosephosphate isomerase | chromosome I | CDS | 2837230 | 798 | + | 0.507519 | |
VC2688 | glpX protein | chromosome I | CDS | 2855699 | 1008 | + | 0.529762 | |
VC2689 | 6-phosphofructokinase, isozyme I | chromosome I | CDS | 2856783 | 996 | - | 0.492972 | |
VC2761 | multidrug resistance protein | chromosome I | CDS | 2946786 | 1230 | + | 0.489431 |