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2024-05-20 03:29:20

Gene list

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COG category: Carbohydrate transport and metabolism
Genomic element: p42f

Number of genes found: 90

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RHE_PF00217 probable D-ribose ABC transporter, substrate-binding proteinp42f CDS230207 963 - 0.577362
NA RHE_PF00028 putative transporter, permease proteinp42f CDS28479 888 + 0.627252
NA RHE_PF00485 probable gluconolactonase precursor proteinp42f CDS546645 915 + 0.636066
NA RHE_PF00382 putative epimerase proteinp42f CDS430482 888 - 0.605856
NA RHE_PF00096 probable sugar ABC transporter, substrate-binding proteinp42f CDS97273 1329 + 0.629797
NA RHE_PF00263 probable 1,4-alpha-glucan branching enzyme proteinp42f CDS280757 1794 - 0.606466
NA RHE_PF00070 probable C4-dicarboxylate ABC transporter, permease proteinp42f CDS69618 1407 + 0.619758
NA RHE_PF00563 putative transcriptional regulator proteinp42f CDS629408 1137 + 0.672823
NA RHE_PF00276 probable trehalose synthase proteinp42f CDS301430 3282 - 0.625229
NA RHE_PF00304 probable alpha-L-fucosidase proteinp42f CDS341754 1299 - 0.625096
NA RHE_PF00291 probable sugar ABC transporter, permease proteinp42f CDS324177 1047 - 0.60745
NA RHE_PF00093 probable sugar ABC transporter, permease proteinp42f CDS94606 900 + 0.605556
NA RHE_PF00099 probable carbohydrate kinase protein, PfkB familyp42f CDS100374 984 + 0.648374
NA RHE_PF00370 hypothetical conserved proteinp42f CDS418193 453 - 0.598234
NA RHE_PF00017 hypothetical conserved proteinp42f CDS16863 765 + 0.628758
NA RHE_PF00091 probable sugar ABC transporter, substrate-binding proteinp42f CDS92282 1305 + 0.621456
NA RHE_PF00483 probable sugar ABC transporter, permease proteinp42f CDS544733 951 + 0.658254
NA RHE_PF00343 putative L-fuculose-phosphate aldolase proteinp42f CDS384956 669 - 0.64275
NA RHE_PF00097 probable sugar ABC transporter, permease proteinp42f CDS98601 939 + 0.591054
NA RHE_PF00236 hypothetical conserved proteinp42f CDS251510 831 + 0.618532
NA RHE_PF00098 probable sugar ABC transporter, permease proteinp42f CDS99590 765 + 0.6
NA RHE_PF00092 probable sugar ABC transporter, permease proteinp42f CDS93669 927 + 0.607336
NA RHE_PF00292 probable sugar ABC transporter, permease proteinp42f CDS325225 996 - 0.591365
NA RHE_PF00482 probable sugar ABC transporter, ATP binding proteinp42f CDS543285 1452 + 0.649449
NA RHE_PF00035 probable ribose ABC transporter, ATP-binding proteinp42f CDS36222 1551 - 0.633785
NA RHE_PF00446 probable myo-inositol catabolism proteinp42f CDS499432 813 + 0.603936
NA RHE_PF00293 probable sugar ABC transporter, ATP-binding proteinp42f CDS326222 1107 - 0.623306
NA RHE_PF00297 probable sugar ABC transporter, substrate-binding proteinp42f CDS332503 1284 + 0.597352
NA RHE_PF00090 probable sugar ABC transporter, ATP-binding proteinp42f CDS91040 1068 + 0.622659
NA RHE_PF00570 probable sugar ABC transporter, ATP-binding proteinp42f CDS637471 1062 + 0.611111
NA RHE_PF00303 putative sugar ABC transporter, substrate-binding proteinp42f CDS340481 1224 - 0.604575
NA RHE_PF00277 putative alpha amylase proteinp42f CDS304712 3228 - 0.61772
NA RHE_PF00377 probable sugar ABC transporter, ATP-binding proteinp42f CDS425089 1326 + 0.619155
NA RHE_PF00447 hypothetical conserved proteinp42f CDS500378 1023 + 0.588465
NA RHE_PF00049 probable sucrose ABC transporter, permease proteinp42f CDS51194 894 + 0.608501
NA RHE_PF00346 putative hydroxypyruvate isomerase proteinp42f CDS387802 777 + 0.629344
NA RHE_PF00323 putative phosphoglycerate mutase proteinp42f CDS363648 750 - 0.545333
NA RHE_PF00031 probable dihydroxyacetone kinase, kinase domain proteinp42f CDS31234 957 - 0.645768
NA RHE_PF00134 putative nucleoside-diphosphate-sugar epimerase proteinp42f CDS140935 1308 + 0.601682
NA RHE_PF00375 probable sugar ABC transporter, permease proteinp42f CDS423257 891 + 0.574635
NA RHE_PF00481 probable sugar ABC transporter, substrate-binding proteinp42f CDS542196 1017 + 0.627335
NA RHE_PF00316 probable sugar ABC transporter, permease proteinp42f CDS355280 1080 + 0.593518
NA RHE_PF00567 probable sugar ABC transporter, permease proteinp42f CDS634460 807 + 0.5886
NA RHE_PF00569 hypothetical conserved proteinp42f CDS636594 855 + 0.618713
NA RHE_PF00565 putative sugar ABC transporter, substrate-binding proteinp42f CDS631959 1299 + 0.593534
NA RHE_PF00215 probable D-ribose ABC transporter, permease proteinp42f CDS227527 1026 - 0.582846
NA RHE_PF00034 probable ribose ABC transporter, permease proteinp42f CDS35164 999 - 0.621622
NA RHE_PF00301 probable sugar ABC transporter, permease proteinp42f CDS338643 885 - 0.60791
NA RHE_PF00317 probable sugar ABC transporter, permease proteinp42f CDS356356 837 + 0.580645
NA RHE_PF00566 putative sugar ABC transporter, permease proteinp42f CDS633549 879 + 0.614334
NA RHE_PF00321 putative sugar ABC transporter, substrate-binding proteinp42f CDS360257 1275 + 0.600784
NA RHE_PF00085 hypothetical conserved proteinp42f CDS86242 822 - 0.631387
NA RHE_PF00449 putative pyruvate decarboxylase proteinp42f CDS502380 1656 + 0.541667
NA RHE_PF00221 hypothetical conserved proteinp42f CDS233639 627 - 0.62201
NA RHE_PF00245 probable multidrug ABC transporter, permease proteinp42f CDS261023 858 + 0.618881
NA RHE_PF00484 probable sugar ABC transporter, permease proteinp42f CDS545680 951 + 0.62776
NA RHE_PF00319 putative sugar ABC transporter, ATP-binding proteinp42f CDS358385 1110 + 0.618919
NA RHE_PF00302 probable sugar ABC transporter, permease proteinp42f CDS339517 927 - 0.600863
NA RHE_PF00383 putative epimerase proteinp42f CDS431707 852 + 0.600939
NA RHE_PF00442 putative glucoamylase proteinp42f CDS494177 1428 + 0.602941
NA RHE_PF00568 probable transcriptional regulator proteinp42f CDS635310 1239 + 0.644068
NA RHE_PF00378 probable sugar ABC transporter, ATP-binding proteinp42f CDS426414 1077 + 0.632312
NA RHE_PF00376 probable sugar ABC transporter, permease proteinp42f CDS424149 960 + 0.609375
NA RHE_PF00037 probable ribose ABC transporter, substrate-binding proteinp42f CDS38487 942 - 0.61465
NA RHE_PF00216 probable D-ribose ABC transporter, ATP-binding proteinp42f CDS228590 1542 - 0.59144
NA RHE_PF00374 putative sugar ABC transporter, substrate-binding proteinp42f CDS421774 1311 + 0.556827
NA RHE_PF00047 probable sucrose ABC transporter, substrate-binding proteinp42f CDS48897 1290 + 0.610078
NA RHE_PF00048 probable sucrose ABC transporter, permease proteinp42f CDS50263 939 + 0.614483
NA RHE_PF00290 probable transcriptional regulator protein, ROK familyp42f CDS322860 1152 + 0.615451
NA RHE_PF00521 hypothetical conserved proteinp42f CDS586813 1350 + 0.64963
NA RHE_PF00088 probable UDP-glucose 4-epimerase proteinp42f CDS89246 957 + 0.648903
NA RHE_PF00550 hypothetical conserved proteinp42f CDS614771 1599 - 0.60788
NA RHE_PF00069 probable C4-dicarboxylate ABC transporter, permease proteinp42f CDS69041 573 + 0.581152
NA RHE_PF00068 probable C4-dicarboxylate ABC transporter, substrate-binding proteinp42f CDS67868 975 + 0.589744
NA RHE_PF00487 putative alpha-mannosidase proteinp42f CDS548115 2871 - 0.644723
NA RHE_PF00237 probable calcium-binding protein, regucalcinp42f CDS252337 888 + 0.641892
NA RHE_PF00030 probable dihydroxyacetone kinase, phosphatase domain proteinp42f CDS30568 663 - 0.647059
bglSf RHE_PF00473 beta-glucosidase proteinp42f CDS533281 2466 - 0.635848
cscA RHE_PF00050 beta-fructofuranosidase proteinp42f CDS52091 1719 + 0.6242
glgBf RHE_PF00275 1,4-alpha-glucan branching enzyme proteinp42f CDS299235 2199 - 0.627558
malQ RHE_PF00262 4-alpha-glucanotransferase (amylomaltase) proteinp42f CDS278847 1914 - 0.627482
mocBf RHE_PF00300 rhizopine ABC transporter, substrate-binding proteinp42f CDS337543 930 - 0.607527
rbcL RHE_PF00042 ribulose bisphosphate carboxylaseoxygenase, large subunit proteinp42f CDS43019 1254 - 0.65311
rpiB RHE_PF00039 ribose 5-phosphate isomerase proteinp42f CDS40431 447 - 0.619687
thuAf RHE_PF00206 trehalosemaltose utilization proteinp42f CDS216945 786 - 0.628499
thuE RHE_PF00210 trehalosemaltose ABC transporter, sugar-binding proteinp42f CDS220709 1266 - 0.592417
thuF RHE_PF00209 trehalosemaltose ABC transporter, permease proteinp42f CDS219658 987 - 0.572442
thuG RHE_PF00208 trehalosemaltose ABC transporter, permease proteinp42f CDS218828 831 - 0.574007
thuK RHE_PF00207 trehalosemaltose ABC transporter, ATP-binding proteinp42f CDS217791 1026 - 0.610136
tpiAf RHE_PF00040 triosephosphate isomerase proteinp42f CDS40874 804 - 0.666667