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2024-05-06 05:14:39

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough

Number of genes found: 128

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Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DVU2308 conserved hypothetical protein TIGR00022chromosome CDS2400453 492 - 0.621951
NA DVU0706 TRAP transporter, DctQ subunitchromosome CDS786371 471 - 0.641189
NA DVUA0077 ABC transporter, permease proteinpDV CDS104230 885 - 0.60226
NA DVU2455 NAD-dependent epimerase/dehydratase family proteinchromosome CDS2557897 951 + 0.560463
NA DVU0554 NAD-dependent epimerase/dehydratase family proteinchromosome CDS623355 939 + 0.505857
NA DVU2845 HIT family proteinchromosome CDS2948707 429 + 0.594406
NA DVU0538 AP endonuclease, family 2chromosome CDS609243 789 + 0.628644
NA DVU2277 hypothetical proteinchromosome CDS2366254 612 - 0.650327
NA DVU1888 ATP-NAD kinase domain proteinchromosome CDS1960433 900 - 0.661111
NA DVU2322 UTP--glucose-1-phosphate uridylyltransferase, putativechromosome CDS2417314 1440 + 0.642361
NA DVU1580 ribose 5-phosphate isomerase, putativechromosome CDS1662846 444 - 0.635135
NA DVU0889 phosphonopyruvate decarboxylase-related proteinchromosome CDS979998 1140 - 0.671053
NA DVU0831 PTS system, IID component, putativechromosome CDS921203 759 - 0.628458
NA DVU0938 isoamylase N-terminal domain proteinchromosome CDS1028909 369 + 0.560976
NA DVU0116 polysaccharide deacetylase family proteinchromosome CDS149719 1077 + 0.678737
NA DVU2088 membrane protein, putativechromosome CDS2178377 921 + 0.612378
NA DVU1650 conserved hypothetical proteinchromosome CDS1730618 1125 - 0.622222
NA DVU0073 CDP-glucose-4,6-dehydratase, putativechromosome CDS89894 1107 + 0.673893
NA DVU0526 drug resistance transporter, putativechromosome CDS598929 1404 + 0.643875
NA DVU1607 hypothetical proteinchromosome CDS1689878 747 + 0.65328
NA DVU3161 ABC transporter, ATP-binding proteinchromosome CDS3317454 1050 + 0.66381
NA DVU1163 major facilitator superfamily proteinchromosome CDS1254740 1275 - 0.603137
NA DVU2887 membrane protein, putativechromosome CDS2985317 969 + 0.685243
NA DVU0979 DAK1 domain proteinchromosome CDS1074581 1065 + 0.623474
NA DVU0204 lipoprotein, putativechromosome CDS248409 411 + 0.666667
NA DVU0919 hypothetical proteinchromosome CDS1011648 435 - 0.572414
NA DVU3356 NAD-dependent epimerase/dehydratase family proteinchromosome CDS3527452 1008 + 0.598214
NA DVU1652 HIT family proteinchromosome CDS1732139 525 - 0.586667
NA DVU1174 hypothetical proteinchromosome CDS1266446 378 - 0.603175
NA DVU3163 ABC transporter, permease proteinchromosome CDS3319975 882 + 0.613379
NA DVU2239 glycosyl hydrolase, family 3chromosome CDS2330937 1446 - 0.659751
NA DVU2952 membrane protein, putativechromosome CDS3058744 1038 - 0.631985
NA DVU2959 conserved hypothetical proteinchromosome CDS3066457 417 + 0.618705
NA DVUA0076 ABC transporter, ATP-binding proteinpDV CDS102804 1395 - 0.597133
NA DVU2182 hypothetical proteinchromosome CDS2280733 132 + 0.325758
NA DVU0740 membrane protein, putativechromosome CDS827914 1176 + 0.631803
NA DVU0697 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerasechromosome CDS771808 1419 - 0.63284
NA DVUA0003 hypothetical proteinpDV CDS1740 3396 + 0.676384
NA DVU1004 membrane protein, putativechromosome CDS1099427 885 - 0.648588
NA DVU2762 membrane protein, putativechromosome CDS2869357 921 - 0.667752
NA DVU1941 HAD-superfamily hydrolase, subfamily IIAchromosome CDS2014099 768 - 0.61849
NA DVU0765 hydroxypyruvate reductase, putativechromosome CDS855564 1365 - 0.684249
NA DVU2822 TRAP transporter solute receptor DctPchromosome CDS2927266 1011 + 0.616222
NA DVU3081 membrane protein, putativechromosome CDS3223039 903 + 0.634551
NA DVU1877 polysaccharide deacetylase family proteinchromosome CDS1944936 1101 + 0.655768
NA DVU0406 membrane protein, putativechromosome CDS454663 939 - 0.608094
NA DVU3237 phosphoenolpyruvate synthase-related proteinchromosome CDS3406865 2322 - 0.686047
NA DVU0246 pyruvate phosphate dikinase, PEP/pyruvate binding domain proteinchromosome CDS278347 2235 - 0.691275
NA DVU1633 PTS system, IIB componentchromosome CDS1716328 462 + 0.580087
NA DVU3074 membrane protein, putativechromosome CDS3217533 888 - 0.652027
NA DVUA0148 major facilitator superfamily proteinpDV CDS193583 3018 + 0.708748
NA DVU0275 polysaccharide deacetylase family proteinchromosome CDS317644 696 - 0.652299
NA DVU3133 glycerol uptake facilitator proteinchromosome CDS3280115 756 + 0.625661
NA DVU2823 TRAP transporter, DctMQ subunitchromosome CDS2928486 1776 + 0.63795
NA DVU1035 glucokinase, putativechromosome CDS1137976 1020 + 0.670588
NA DVU2996 NAD-dependent epimerase/dehydratase family proteinchromosome CDS3106817 924 - 0.678571
NA DVU0427 hypothetical proteinchromosome CDS483204 198 + 0.585859
NA DVU0082 conserved hypothetical proteinchromosome CDS100383 1593 - 0.671061
NA DVU0980 DAK2 domain proteinchromosome CDS1075824 633 + 0.647709
NA DVUA0043 polysaccharide deacetylase family proteinpDV CDS51965 852 + 0.656103
NA DVU0342 NAD-dependent epimerase/dehydratase family proteinchromosome CDS387502 915 - 0.627322
NA DVU1153 hypothetical proteinchromosome CDS1246834 111 - 0.612613
NA DVU2472 conserved hypothetical proteinchromosome CDS2580029 2340 + 0.679915
NA DVU0011 TRAP transporter solute receptor DctPchromosome CDS13586 1026 - 0.62963
NA DVU0158 conserved hypothetical protein TIGR00104chromosome CDS195388 999 + 0.687688
NA DVU1651 conserved hypothetical proteinchromosome CDS1731757 372 - 0.545699
NA DVU2349 carbohydrate phosphorylase family proteinchromosome CDS2442630 2568 + 0.642523
NA DVU0460 predicted phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS527671 801 + 0.657928
NA DVU2424 membrane protein, putativechromosome CDS2529640 915 - 0.666667
NA DVU1833 phosphoenolpyruvate synthase, putativechromosome CDS1898486 3576 - 0.607662
NA DVU0372 membrane protein, putativechromosome CDS420136 693 - 0.62482
NA DVU0632 cupin family proteinchromosome CDS699063 618 - 0.650485
NA DVU3147 6-phosphofructo-2-kinase/fructose-2,6-biphosphat asechromosome CDS3297454 1263 - 0.631037
NA DVU0010 TRAP transporter, DctQ subunitchromosome CDS12958 567 - 0.652557
NA DVU0981 multiphosphoryl transfer protein, putativechromosome CDS1076460 2565 + 0.683431
NA DVUA0096 major facilitator superfamily proteinpDV CDS129163 1212 + 0.667492
NA DVU1632 PTS system, IIA componentchromosome CDS1715889 438 + 0.614155
NA DVU1550 phosphoglycerate mutase family proteinchromosome CDS1626312 657 - 0.634703
NA DVU3214 phosphoenolpyruvate synthase-related proteinchromosome CDS3380281 2655 - 0.673823
NA DVU0395 HIT family proteinchromosome CDS443991 420 + 0.619048
NA DVU0988 carbohydrate kinase, PfkB familychromosome CDS1082842 927 - 0.629989
NA DVU0343 HPCH/HPAI aldolase family proteinchromosome CDS388419 783 - 0.676884
NA DVU1167 hypothetical proteinchromosome CDS1259801 537 + 0.368715
NA DVU0319 NAD-dependent epimerase/dehydratase family proteinchromosome CDS362485 1026 - 0.654971
NA DVU1895 major facilitator superfamily proteinchromosome CDS1968364 1167 + 0.638389
NA DVU2638 conserved domain proteinchromosome CDS2754320 1089 - 0.662994
NA DVU3162 ABC transporter, periplasmic substrate-binding proteinchromosome CDS3318606 1296 + 0.638117
NA DVU1634 membrane protein, putativechromosome CDS1716815 672 + 0.58631
NA DVU0009 TRAP transporter, DctM subunitchromosome CDS11681 1281 - 0.666667
NA DVU0947 membrane protein, putativechromosome CDS1041478 906 - 0.644592
NA DVU0152 phosphoenolpyruvate synthase-related proteinchromosome CDS186986 2562 + 0.63466
NA DVU1658 transaldolase, putativechromosome CDS1738843 648 + 0.604938
NA DVU1241 conserved hypothetical proteinchromosome CDS1329016 318 + 0.58805
NA DVU2641 lipoprotein, putativechromosome CDS2757048 735 + 0.665306
NA DVU3164 ABC transporter, permease proteinchromosome CDS3320853 834 + 0.627098
NA DVU0685 phosphomannomutasechromosome CDS759320 1362 + 0.633627
NA DVU2739 pyruvate phosphate dikinase, PEP/pyruvate binding domain proteinchromosome CDS2842608 2838 + 0.652572
NA DVU1630 PTS system, IIA componentchromosome CDS1714491 450 + 0.582222
dctM DVU0705 TRAP transporter, DctM subunitchromosome CDS785091 1284 - 0.638629
dctP DVU0707 TRAP transporter solute receptor DctPchromosome CDS786926 1017 - 0.609636
eno DVU0322 enolasechromosome CDS365096 1314 + 0.64688
fba DVU2143 fructose-1,6-bisphosphate aldolase, class IIchromosome CDS2240742 924 + 0.636364
fbp DVU1841 fructose-1,6-bisphosphatasechromosome CDS1911438 1014 - 0.586785
gap-1 DVU0565 glyceraldehyde 3-phosphate dehydrogenasechromosome CDS630087 1017 - 0.616519
gap-2 DVU2144 glyceraldehyde 3-phosphate dehydrogenasechromosome CDS2241689 1002 + 0.641717
glgA DVU2244 glycogen synthasechromosome CDS2338679 1470 - 0.664626
glgB DVU2243 1,4-alpha-glucan branching enzymechromosome CDS2336760 1923 - 0.652626
glmM DVU1282 phosphoglucosamine mutasechromosome CDS1374532 1353 + 0.609017
glpX DVU1539 fructose-1,6-bisphosphatase, class IIchromosome CDS1605816 984 - 0.640244
gmhA DVU1889 phosphoheptose isomerasechromosome CDS1961468 627 + 0.626794
gpm DVU2935 phosphoglycerate mutasechromosome CDS3040354 753 + 0.665339
gpmA DVU1619 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independentchromosome CDS1703251 1536 + 0.654297
ilvD DVU3373 dihydroxy-acid dehydratasechromosome CDS3544991 1665 - 0.672072
malQ DVU3148 4-alpha-glucanotransferasechromosome CDS3299005 1512 - 0.652778
pfkA DVU2061 6-phosphofructokinasechromosome CDS2136887 1335 + 0.63221
pgi DVU3222 glucose-6-phosphate isomerasechromosome CDS3391257 1344 - 0.681548
pgk DVU2529 phosphoglycerate kinasechromosome CDS2639592 1182 - 0.637902
pgl DVU2313 6-phosphogluconolactonasechromosome CDS2406614 750 + 0.653333
pgm DVU1428 phosphoglucomutase, alpha-D-glucose phosphate-specificchromosome CDS1501801 1656 - 0.632246
ptsH DVU0830 phosphocarrier protein HPrchromosome CDS920882 261 - 0.651341
ptsI DVU0829 phosphoenolpyruvate-protein phosphotransferasechromosome CDS919099 1773 - 0.64185
pyk DVU2514 pyruvate kinasechromosome CDS2627119 1410 + 0.656738
rfaD DVU0481 ADP-L-glycero-D-mannoheptose-6-epimerasechromosome CDS547103 972 + 0.614198
rpe DVU2531 ribulose-phosphate 3-epimerasechromosome CDS2642995 669 - 0.635277
suhB DVU1680 inositol-1-monophosphatasechromosome CDS1758067 792 - 0.650253
tkt DVU2530 transketolasechromosome CDS2640910 1995 - 0.663659
tpiA DVU1677 triosephosphate isomerasechromosome CDS1756281 756 - 0.615079
wcaG DVU0090 GDP-fucose synthetasechromosome CDS115316 972 + 0.628601