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2024-05-04 00:41:37

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Pseudoalteromonas haloplanktis TAC125, TAC125

Number of genes found: 129

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSHAa0442 putative transport protein (MFS family)chromosome I CDS460808 1296 - 0.445216
NA PSHAa2012 putative orphan proteinchromosome I CDS2123575 351 - 0.384615
NA PSHAa1428 putative N-acetylglucosaminyl-group transferasechromosome I CDS1502672 1137 + 0.373791
NA PSHAa2922 putative aldolase or epimerasechromosome I CDS3092820 636 + 0.400943
NA PSHAa2136 putative transporterchromosome I CDS2260062 1401 + 0.433262
NA PSHAa0720 putative orphan protein ; putative membrane proteinchromosome I CDS754405 477 + 0.429769
NA PSHAa0283 putative transport protein (MFS family)chromosome I CDS297787 1149 - 0.40557
NA PSHAa0083 conserved protein of unknown function ; putative integral inner membrane proteinchromosome I CDS89331 843 - 0.41637
NA PSHAa1746 putative hexuronate transport protein (MFS family)chromosome I CDS1829626 1308 - 0.425076
NA PSHAb0042 putative membrane proteinchromosome II CDS49385 354 + 0.358757
NA PSHAa2173 putative transporterchromosome I CDS2309566 1194 + 0.404523
NA PSHAb0479 putative idonate or gluconate permeasechromosome II CDS540778 1344 - 0.425595
NA PSHAa1407 putative gluconate-6-phosphate dehydrogenasechromosome I CDS1475918 1374 + 0.427948
NA PSHAb0159 putative sialidasechromosome II CDS196316 1143 - 0.455818
NA PSHAa1779 putative Capsular polysaccharide biosynthesis, capCchromosome I CDS1868307 729 - 0.371742
NA PSHAa1351 alpha-glucosidasechromosome I CDS1404027 1626 - 0.413899
NA PSHAa1259 putative transport protein of the major facilitator familychromosome I CDS1315522 1170 - 0.426496
NA PSHAa0569 conserved protein of unknown function; putative membrane proteinchromosome I CDS589087 375 - 0.408
NA PSHAa2148 putative enzyme ; class II aldolase/adducin, N-terminal familychromosome I CDS2275627 771 - 0.448768
NA PSHAa2283 putative membrane protein; triplicated sequencechromosome I CDS2427402 564 - 0.328014
NA PSHAb0033 putative membrane proteinchromosome II CDS38578 621 + 0.407407
NA PSHAa1744 putative 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolasechromosome I CDS1827945 618 - 0.435275
NA PSHAa1356 putative sugar transporterchromosome I CDS1414521 1494 + 0.420348
NA PSHAa2082 conserved protein of unknown functionchromosome I CDS2206204 636 + 0.382075
NA PSHAb0214 putative transport proteinchromosome II CDS251834 876 + 0.389269
NA PSHAa2524 conserved protein of unknown function, highly conserved in gamma-proteobacteriachromosome I CDS2678374 594 + 0.422559
NA PSHAa1742 Fructose-1,6-bisphosphatasechromosome I CDS1825872 981 - 0.408767
NA PSHAa1936 conserved protein of unknown functionchromosome I CDS2045269 231 - 0.324675
NA PSHAa1178 putative L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein (MFS family)chromosome I CDS1225096 1182 + 0.403553
NA PSHAa2385 putative HIT family hydrolasechromosome I CDS2533955 402 - 0.430348
NA PSHAa1861 putative orphan proteinchromosome I CDS1961915 1140 - 0.401754
NA PSHAa2069 putative orphan protein ; putative inner membrane proteinchromosome I CDS2189158 600 + 0.43
NA PSHAa2863 putative polysaccharide deacetylase family proteinchromosome I CDS3036846 1026 + 0.392788
NA PSHAa0242 putative general secretion pathway protein Nchromosome I CDS255502 759 + 0.417655
NA PSHAa2995 putative transcriptional regulator, DeoR familychromosome I CDS3184573 699 - 0.426323
NA PSHAb0549 putative fructose-1,6-bisphosphatasechromosome II CDS614978 969 - 0.340557
NA PSHAa1354 putative alpha-amylasechromosome I CDS1410774 1779 + 0.415964
NA PSHAa3000 putative enzymatic proteinchromosome I CDS3188611 615 - 0.37561
NA PSHAb0129 putative dihydroxyacid dehydratase (ilvD-like)chromosome II CDS159570 1680 + 0.435714
NA PSHAa1732 conserved protein of unknown function with protein kinase-like domainchromosome I CDS1813492 861 + 0.379791
NA PSHAb0209 putative carbohydrate kinasechromosome II CDS246733 915 + 0.420765
NA PSHAa2966 conserved protein of unknown functionchromosome I CDS3150592 855 - 0.410526
NA PSHAb0023 putative membrane proteinchromosome II CDS29277 1518 - 0.453228
NA PSHAa1355 putative glycosidasechromosome I CDS1412651 1881 + 0.430622
NA PSHAa1329 conserved protein of unknown function ; putative membrane proteinchromosome I CDS1381096 873 + 0.399771
NA PSHAa0286 conserved protein of unknown function ; putative aldolase class II familychromosome I CDS300382 768 + 0.429688
NA PSHAa2482 putative permeasechromosome I CDS2634455 867 + 0.414072
NA PSHAb0520 conserved protein of unknown function ; putative secreted proteinchromosome II CDS587012 753 + 0.407703
NA PSHAa0632 conserved protein of unknown function ; putative inner membrane proteinchromosome I CDS653489 1032 - 0.396318
NA PSHAa0401 putative polysaccharide biosynthesis proteinchromosome I CDS419833 1956 + 0.403374
NA PSHAb0183 putative transporterchromosome II CDS221736 1227 + 0.405868
NA PSHAa2706 putative transporter (MFS family)chromosome I CDS2867138 1368 - 0.42617
NA PSHAa2144 putative transporterchromosome I CDS2270835 1224 + 0.441993
NA PSHAa2207 putative carbohydrates permeasechromosome I CDS2344268 1203 + 0.396509
NA PSHAa2005 conserved protein of unknown function, some similarity with a Photorhabdus luminescens proteinchromosome I CDS2114187 2529 - 0.323053
NA PSHAa1997 putative orphan protein ; putative membrane proteinchromosome I CDS2108533 276 + 0.387681
NA PSHAa2324 putative phosphoheptose isomerase familychromosome I CDS2465499 591 - 0.409475
NA PSHAa2097 putative orphan proteinchromosome I CDS2221232 210 - 0.419048
NA PSHAa0866 putative orphan proteinchromosome I CDS894108 522 + 0.383142
NA PSHAb0548 putative fructose-bisphosphate aldolasechromosome II CDS613970 897 - 0.311037
NA PSHAa1682 putative membrane proteinchromosome I CDS1761251 381 - 0.380577
NA PSHAa2116 conserved protein of unknown functionchromosome I CDS2236040 909 - 0.387239
NA PSHAa1364 putative glucokinasechromosome I CDS1424481 999 + 0.433433
NA PSHAa2741 conserved protein of unknown function ; putative enzyme with NAD(P)-binding domainchromosome I CDS2909027 681 - 0.453745
NA PSHAb0447 conserved protein of unknown functionchromosome II CDS508534 342 + 0.394737
NA PSHAa2946 putative permeasechromosome I CDS3120948 1302 - 0.441628
NA PSHAa1357 putative alpha-amylasechromosome I CDS1416186 1716 + 0.431235
NA PSHAa1333 putative PTS system protein (partial match)chromosome I CDS1384127 498 - 0.385542
NA PSHAb0360 putative permeasechromosome II CDS419366 282 + 0.312057
NA PSHAa2586 putative L-sorbosone dehydrogenase (SNDH)chromosome I CDS2730876 1095 - 0.421005
NA PSHAa1707 conserved protein of unknown function ; putative dehydrogenase with soluble quinoprotein glucose dehydrogenase domainchromosome I CDS1785750 1206 + 0.416252
NA PSHAa1745 putative ketodeoxygluconokinasechromosome I CDS1828620 933 - 0.403001
NA PSHAa0058 putative integral inner membrane protein; putative exporterchromosome I CDS60483 930 - 0.390323
NA PSHAa1084 conserved protein of unknown function ; putative inner membrane proteinchromosome I CDS1123266 345 + 0.365217
agaI PSHAa1141 6-phosphogluconolactonasechromosome I CDS1184212 711 + 0.441631
ampG PSHAa2248 putative muropeptide transport protein (mFS family), highly conserved in gamma-proteobacteriachromosome I CDS2386172 1380 + 0.413043
bcr PSHAa1223 putative efflux pumpchromosome I CDS1269963 1203 - 0.374065
bcsZ PSHAa2164 Endoglucanase precursor (Endo-1, 4-beta-glucanase) (Cellulase) (Carboxymethylcellulase) (CMCase)chromosome I CDS2294446 1131 + 0.38992
cpsB PSHAa2920 putative mannose-1-phosphate guanyltransferase, colanic acid synthesischromosome I CDS3090333 1428 - 0.422969
deoB PSHAb0081 Phosphopentomutase (Phosphodeoxyribomutase)chromosome II CDS93162 1218 + 0.43514
eda PSHAa1367 multifunctional: 2-keto-3-deoxygluconate 6-phosphate aldolase; 2-keto-4-hydroxyglutarate aldolase; oxaloacetate decarboxylasechromosome I CDS1428752 633 + 0.453397
edd PSHAa1366 6-phosphogluconate dehydratasechromosome I CDS1426868 1854 + 0.437433
eno PSHAa0742 enolasechromosome I CDS777199 1299 + 0.409546
epd PSHAa1368 glyceraldehyde 3-phosphate dehydrogenasechromosome I CDS1429381 1005 + 0.40796
epd PSHAa0594 D-erythrose 4-phosphate dehydrogenasechromosome I CDS619987 1032 + 0.416667
fbaA PSHAa0596 putative fructose-1,6-bisphosphate aldolase class IIchromosome I CDS622446 1065 + 0.432864
fbaA PSHAa1743 fructose-bisphosphate aldolase, class IIchromosome I CDS1826849 1083 - 0.401662
fbaA PSHAa1093 fructose-bisphosphate aldolase, class IIchromosome I CDS1135912 1083 + 0.413666
fbp PSHAa0463 Fructose-1,6-bisphosphatasechromosome I CDS480524 969 - 0.433437
galK PSHAa1769 galactokinasechromosome I CDS1855493 1146 - 0.407504
galM PSHAa1767 galactose-1-epimerase (mutarotase)chromosome I CDS1852779 933 - 0.392283
gapA PSHAa1900 glyceraldehyde 3-phosphate dehydrogenasechromosome I CDS2005515 1443 - 0.413028
gapB PSHAb0182 glyceraldehyde 3-phosphate dehydrogenasechromosome II CDS220710 1014 + 0.420118
glmM PSHAa0872 phosphoglucosamine mutasechromosome I CDS898669 1350 + 0.428889
glpF PSHAb0552 putative glycerol diffusion channelchromosome II CDS618893 780 + 0.369231
glpR PSHAb0550 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate (DeoR family)chromosome II CDS616236 762 - 0.354331
gpmM PSHAa0366 phosphoglycerate mutase III, cofactor-independentchromosome I CDS382408 1545 - 0.471197
gsk PSHAa2334 inosine-guanosine kinasechromosome I CDS2477959 1305 + 0.414559
hit PSHAa2917 member of HIT (histidine triad) family that contains Ap3A and Ap4A hydrolaseschromosome I CDS3086702 372 + 0.389785
idnK PSHAb0480 putative D-gluconate kinase active at low temperature (idonate catabolism)chromosome II CDS542275 540 + 0.372222
ilvD PSHAa2769 dihydroxyacid dehydratase; possibly homodimiericchromosome I CDS2943546 1857 - 0.460959
lmrb PSHAa0650 Lincomycin resistance protein lmrBchromosome I CDS673820 1431 - 0.385045
madN PSHAa2186 putative membrane proteinchromosome I CDS2323868 855 + 0.407018
malB PSHAb0217 putative maltoporin, high-affinity receptor for maltose and maltoseoligosaccharideschromosome II CDS255214 1386 + 0.417027
mgsA PSHAa2175 methylglyoxal synthasechromosome I CDS2311413 465 + 0.434409
nadK PSHAa1220 NAD kinasechromosome I CDS1267249 885 - 0.436158
nagA PSHAb0157 putative N-acetylglucosamine-6-phosphate deacetylasechromosome II CDS191904 1134 - 0.415344
nagB PSHAb0148 putative glucosamine-6-phosphate deaminasechromosome II CDS183137 807 - 0.385378
nagK PSHAb0149 putative N-acetylglucosamine kinase with Actin-like ATPase domain/transcriptional regulator (NagC/XylR (ROK) family)chromosome II CDS183945 876 - 0.405251
nagZ PSHAb0065 Beta-hexosaminidase A precursor (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) (Chitobiase)chromosome II CDS76842 1800 - 0.413889
nanE PSHAb0150 putative N-acetylmannosamine-6P epimerase, NAD(P)-linked, with ribulose-phoshate binding barrelchromosome II CDS184820 708 - 0.44774
npr PSHAa2555 putative phosphocarrier protein NPr (HPr-like), nitrogen-relatedchromosome I CDS2702333 273 + 0.413919
pgi PSHAa1139 glucosephosphate isomerasechromosome I CDS1180791 1647 + 0.391014
pgk PSHAa0595 phosphoglycerate kinasechromosome I CDS621062 1176 + 0.430272
pgm PSHAa1634 phosphoglucomutasechromosome I CDS1703351 1638 - 0.416972
ppsA PSHAb0557 Phosphoenolpyruvate synthase (Pyruvate, water dikinase) (PEP synthase)chromosome II CDS626490 2340 - 0.419231
prpB PSHAa1775 2-methylisocitrate lyasechromosome I CDS1864009 873 - 0.416953
ptsN PSHAa2553 PTS family enzyme IIAchromosome I CDS2701012 411 + 0.394161
pykA PSHAa1406 pyruvate kinasechromosome I CDS1474144 1437 - 0.43563
rpe PSHAa2710 D-ribulose-5-phosphate 3-epimerasechromosome I CDS2873338 684 - 0.403509
rpiA PSHAa0667 ribose 5-phosphate isomerase Achromosome I CDS695016 756 - 0.396825
smvA PSHAb0203 putative SmvA (YddG) efflux proteinchromosome II CDS239070 921 + 0.388708
suhB PSHAa0323 inositol-1-monophosphatasechromosome I CDS339326 804 - 0.422886
talB PSHAa2559 transaldolase Bchromosome I CDS2706299 951 + 0.419558
tktA PSHAa0671 transketolase 1 (TK 1)chromosome I CDS698498 1992 + 0.444779
tpiA PSHAa0873 triosephosphate isomerasechromosome I CDS900091 750 + 0.413333
uxuB PSHAb0208 D-mannonate oxidoreductasechromosome II CDS245207 1524 + 0.415354
yraR PSHAa2764 putative NADH dehydrogenase with NAD(P)-binding domainchromosome I CDS2938284 657 - 0.398782
zwf PSHAa1140 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1. 49) (G6PD)chromosome I CDS1182737 1476 + 0.408537