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2024-04-29 09:04:20

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Lactobacillus sakei subsp. sakei 23K, 23K

Number of genes found: 139

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Lactobacillus sakei subsp. sakei 23K, 23K
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LSA0983 Putative aldose-1 epimerasechromosome CDS976445 879 - 0.410694
NA LSA1643 Putative sugar kinase, ROK familychromosome CDS1628215 873 + 0.392898
NA LSA0033 Putative transport protein, Major Facilitator Superfamilychromosome CDS32333 1140 - 0.485088
NA LSA1430 Hypothetical proteinchromosome CDS1400732 834 + 0.495204
NA LSA1035 Hypothetical small integral membrane proteinchromosome CDS1026177 177 + 0.39548
NA LSA1542 Putative phosphotransferase system, enzyme IIC (C-terminal fragment), authentic frameshiftchromosome CDS1511876 1074 - 0.464618
NA LSA1080 Myo-inositol monophosphatasechromosome CDS1074562 798 - 0.427318
NA LSA0315 Hypothetical proteinchromosome CDS319948 642 - 0.465732
NA LSA1786 Putative melibiose:Na(+) transport proteinchromosome CDS1769205 1245 + 0.458635
NA LSA0511 L-threonine dehydrogenase (C-terminal fragment), authentic frameshiftchromosome CDS529250 666 + 0.423423
NA LSA0111 Hypothetical proteinchromosome CDS104298 819 + 0.418803
NA LSA1801 Putative drug ABC exporter, membrane-spanning subunitchromosome CDS1790636 735 - 0.361905
NA LSA1528 Putative aromatic acid transport protein (C-terminal fragment), authentic frameshiftchromosome CDS1500801 174 - 0.431034
NA LSA0227 Putative drug:H(+) antiporterchromosome CDS223777 1344 + 0.442708
NA LSA0420 Putative drug:H(+) antiporter (N-terminal fragment), authentic frameshiftchromosome CDS428621 615 - 0.434146
NA LSA1579 Putative teichoic acid/polysaccharide export proteinchromosome CDS1553850 1542 - 0.319066
NA LSA0712 Glycerate kinasechromosome CDS716005 1146 + 0.475567
NA LSA0308 Putative drug:H(+) antiporterchromosome CDS311555 1182 - 0.415398
NA LSA0254 Putative carbohydrate kinasechromosome CDS249406 939 + 0.370607
NA LSA1193 Putative oxidoreductasechromosome CDS1175147 639 - 0.442879
NA LSA0160 Hypothetical proteinchromosome CDS154294 918 - 0.424837
NA LSA1340 Putative transport proteinchromosome CDS1311540 909 - 0.414741
NA LSA0991 Hypothetical proteinchromosome CDS984534 867 - 0.426759
NA LSA0094 Putative transport protein, Major Facilitator Superfamilychromosome CDS90563 1224 - 0.474673
NA LSA0536 Hypothetical proteinchromosome CDS559648 645 + 0.43876
NA LSA1350 Hypothetical proteinchromosome CDS1319410 672 - 0.470238
NA LSA1872 Putative drug:H(+) antiporterchromosome CDS1858132 1473 - 0.468432
NA LSA0711 Putative gluconate permeasechromosome CDS714711 1284 + 0.432243
NA LSA1866 Hypothetical membrane proteinchromosome CDS1852043 468 - 0.442308
NA LSA1533 Putative cellobiose-specific phosphotransferasesystem, enzyme IIAchromosome CDS1504751 336 - 0.416667
NA LSA0470 Hypothetical proteinchromosome CDS488035 1026 - 0.432749
NA LSA0253 Putative transcriptional regulator with a sugar kinase domain, GntR familychromosome CDS248146 1092 - 0.352564
NA LSA1443 Putative inorganic polyphosphate/ATP-NAD kinasechromosome CDS1417391 807 - 0.438662
NA LSA1457 Putative cellobiose-specific phosphotransferase system, enzyme IICchromosome CDS1430724 1296 - 0.408179
NA LSA1433 Putative transport protein, major facilitator superfamilychromosome CDS1404495 1179 - 0.427481
NA LSA0668 Hypothetical proteinchromosome CDS670866 243 - 0.403292
NA LSA1529 Putative aromatic acid transport protein (N-terminal fragment), authentic frameshiftchromosome CDS1500983 1014 - 0.477318
NA LSA1489 Hypothetical integral membrane proteinchromosome CDS1463572 606 + 0.468647
NA LSA1010 Putative drug:H(+) antiporter (N-terminal fragment), authentic frameshiftchromosome CDS1001242 387 - 0.426357
NA LSA1200 Putative trehalose and glucose-specific phosphotransferase system, enzyme IIBCchromosome CDS1181045 1479 - 0.421231
NA LSA0471 Putative glucitol/sorbitol phosphotransferase system, enzyme IIAchromosome CDS489206 393 + 0.427481
NA LSA1198 Putative trehalose and glucose-specific phosphotransferase system, enzyme EIIAchromosome CDS1178877 477 - 0.433962
NA LSA1170 Putative facilitator protein, MIP familychromosome CDS1156123 720 - 0.409722
NA LSA1053 Putative cinnamoyl-CoA reductase (oxidoreductase)chromosome CDS1047385 1029 - 0.432459
NA LSA0432 Putative sugar phosphatase, HAD superfamilychromosome CDS440301 786 + 0.426209
NA LSA0123 Putative sugar kinase, ROK familychromosome CDS114450 888 + 0.418919
NA LSA1623 Hypothetical integral membrane proteinchromosome CDS1609216 678 - 0.387906
NA LSA0419 Putative drug:H(+) antiporter (C-terminal fragment), authentic frameshiftchromosome CDS427759 894 - 0.430649
NA LSA0628 Putative diadenosine polyphosphate hydrolasechromosome CDS631277 429 - 0.433566
NA LSA1531 Putative beta-glucosidasechromosome CDS1502838 1449 - 0.458247
NA LSA1630 Putative sugar kinase, ROK familychromosome CDS1615819 936 + 0.440171
NA LSA1690 Putative cellobiose-specific phosphotransferasesystem, enzyme IICchromosome CDS1671714 1317 - 0.364465
NA LSA0140 Hypothetical integral membrane proteinchromosome CDS134511 1368 + 0.429094
NA LSA1621 Putative drug:H(+) antiporterchromosome CDS1607647 1254 + 0.464115
NA LSA0582 Hypothetical proteinchromosome CDS591129 426 + 0.450704
NA LSA0759 Putative mannose-specific phosphotransferase system, enzyme IIA (N-terminal fragment), authentic frameshiftchromosome CDS754505 192 + 0.390625
NA LSA0089 Putative drug transport proteinchromosome CDS86081 927 - 0.423948
NA LSA0740 Hypothetical integral membrane proteinchromosome CDS736043 357 - 0.411765
NA LSA0773 Hypothetical proteinchromosome CDS769943 681 - 0.393539
NA LSA0770 Putative drug:H(+) antiporterchromosome CDS766358 1428 + 0.413866
NA LSA0760 Putative mannose-specific phosphotransferase system, enzyme IIA (C-terminal fragment), authentic frameshiftchromosome CDS754693 234 + 0.363248
NA LSA1009 Putative drug:H(+) antiporter (C-terminal fragment), authentic frameshiftchromosome CDS1000541 693 - 0.422799
NA LSA0263 Hypothetical integral membrane proteinchromosome CDS258072 468 - 0.393162
NA LSA0469 Putative drug:H(+) antiporterchromosome CDS486541 1461 + 0.4141
NA LSA1812 Putative surface polysaccharide deacetylasechromosome CDS1803704 1407 + 0.426439
NA LSA0228 Hypothetical proteinchromosome CDS225117 600 + 0.455
NA LSA0510 L-threonine dehydrogenase (N-terminal fragment), authentic frameshiftchromosome CDS528968 264 + 0.431818
NA LSA0788 Putative facilitator protein, MIP familychromosome CDS781764 714 + 0.448179
NA LSA0205 Putative drug:H(+) antiporterchromosome CDS197102 1560 + 0.432692
NA LSA0353 Putative cellobiose-specific phosphotransferase system, enzyme IIBchromosome CDS353900 318 + 0.40566
NA LSA1169 Putative 6-phospho-beta-glucosidase, glycoside hydrolase family 1chromosome CDS1154400 1374 - 0.433042
NA LSA0268 Putative drug:H(+) antiporterchromosome CDS261705 1176 + 0.453231
NA LSA1492 Hypothetical proteinchromosome CDS1464678 819 - 0.429792
NA LSA1204 Putative sugar transporterchromosome CDS1186810 867 - 0.397924
aqpZ LSA1844 Aquaporine Zchromosome CDS1834651 654 - 0.426605
araA LSA1856 L-arabinose isomerasechromosome CDS1843362 1425 - 0.409123
araB LSA1859 L-ribulokinasechromosome CDS1845820 1611 - 0.459342
araD LSA1857 L-ribulose 5-phosphate 4-epimerasechromosome CDS1845075 735 - 0.44898
araT LSA1860 D-Arabinose:H(+) symporterchromosome CDS1847450 1383 - 0.438901
citE LSA1225 Citrate lyase, beta subunitchromosome CDS1206625 858 - 0.38345
deoB LSA0796 Phosphopentomutase (Phosphodeoxyribomutase)chromosome CDS787515 1191 + 0.419815
dexB LSA1791 Glucan 1,6-alpha-glucosidase (dextran glucosidase)chromosome CDS1775554 1647 - 0.382514
eno LSA0607 Phosphopyruvate hydratasechromosome CDS609932 1296 + 0.408951
fba LSA1527 Fructose-bisphosphate aldolasechromosome CDS1499463 864 - 0.399306
fbp LSA1778 Fructose-1,6-bisphosphatasechromosome CDS1753051 1926 + 0.456906
fruA LSA1050 Fructose-specific phosphotransferase system, enzyme IIABCchromosome CDS1041839 1935 + 0.436693
fruK LSA1049 1-phosphofructokinase (fructose-1-phosphate kinase)chromosome CDS1040897 918 + 0.433551
fruR LSA1048 Fructose operon transcription regulator, DeoR familychromosome CDS1040145 753 + 0.407703
galK LSA0764 Galactokinasechromosome CDS759399 1167 + 0.382177
galM LSA0767 Aldose 1-epimerase (mutarotase)chromosome CDS763136 1041 + 0.423631
galP LSA0185 Galactose:cation symporterchromosome CDS176864 1416 + 0.384181
galT LSA0766 Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase)chromosome CDS761594 1497 + 0.419506
gap LSA0604 Glyceraldehyde 3-phosphate dehydrogenasechromosome CDS606702 1017 + 0.413963
glk LSA1329 Glucokinasechromosome CDS1298719 972 - 0.425926
glmM LSA1357 Phosphoglucosamine mutase (Glucosamine 6-P mutase)chromosome CDS1326628 1353 - 0.402069
glpF LSA0651 Glycerol uptake facilitator protein, MIP familychromosome CDS655538 720 + 0.458333
gndA LSA1385 6-phosphogluconate dehydrogenasechromosome CDS1353144 1422 - 0.413502
gntK LSA0298 Gluconokinasechromosome CDS295972 1560 + 0.419231
gntP LSA0299 Gluconate:H(+) symporterchromosome CDS297622 1353 + 0.436807
gntZ LSA0297 6-phosphogluconate dehydrogenasechromosome CDS295038 900 + 0.428889
gpm1 LSA0100 Phosphoglycerate mutasechromosome CDS96789 708 + 0.474576
gpm2 LSA0131 Phosphoglycerate mutasechromosome CDS123831 657 - 0.455099
gpm3 LSA0206 Phosphoglycerate mutasechromosome CDS198757 690 + 0.413043
gpm4 LSA0803 Phosphoglycerate mutasechromosome CDS795997 660 + 0.45
gpm5 LSA1855 Phosphoglycerate mutasechromosome CDS1842640 612 - 0.50817
kdgK LSA0291 2-dehydro-3-deoxygluconokinasechromosome CDS290616 1023 + 0.44086
lacL LSA1711 Beta-galactosidase, large subunit (Lactase, large subunit)chromosome CDS1695281 1878 - 0.444622
lacM LSA1710 Beta-galactosidase, small subunit (Lactase, small subunit)chromosome CDS1694341 957 - 0.486938
manA LSA1146 Mannose-6-phosphate isomerasechromosome CDS1133860 975 - 0.422564
manL LSA0449 Mannose-specific phosphotransferase system, enzyme IIABchromosome CDS463668 978 + 0.390593
manM LSA0450 Mannose-specific phosphotransferase system, enzyme IICchromosome CDS464680 807 + 0.432466
manN LSA0451 Mannose-specific phosphotransferase system, enzyme IIDchromosome CDS465505 912 + 0.376096
melA LSA1795 Alpha-galactosidase (Melibiase)chromosome CDS1781915 2175 - 0.388046
mgsA LSA1157 Methylglyoxal synthasechromosome CDS1144834 423 - 0.423168
nagA LSA1588 N-acetylglucosamine-6-phosphate deacetylasechromosome CDS1564739 1140 - 0.410526
nagB LSA0417 Glucosamine-6-phosphate deaminasechromosome CDS426022 708 + 0.382768
nagE LSA0060 N-acetylglucosamine and glucose-specific phosphotransferase system, enzyme IIABCchromosome CDS54975 2019 + 0.434869
nanE LSA1641 N-acylglucosamine-6-phosphate 2-epimerase (N-acetylmannosamine-6-phosphate 2-epimerase)chromosome CDS1625640 696 - 0.420977
pfk LSA1033 6-phosphofructokinasechromosome CDS1021630 960 - 0.429167
pgi LSA1179 Glucose-6-phosphate isomerasechromosome CDS1161804 1347 - 0.397921
pgk LSA0605 Phosphoglycerate kinasechromosome CDS607819 1215 + 0.4107
pgm LSA0521 Phosphoglucomutasechromosome CDS537274 1725 + 0.412174
ppdK LSA1141 Pyruvate phosphate dikinasechromosome CDS1128491 2622 - 0.457285
ptsH LSA1463 Phosphocarrier protein HPr (Histidine-containing protein)chromosome CDS1439647 267 - 0.404494
ptsI LSA1462 Phosphoenolpyruvate-protein phosphotransferase(Phosphotransferase system, enzyme I)chromosome CDS1437923 1725 - 0.402319
pyk LSA1032 Pyruvate kinasechromosome CDS1019787 1761 - 0.400341
rbsD LSA0201 Ribose mutarotasechromosome CDS193997 396 + 0.343434
rbsK LSA0202 Ribokinasechromosome CDS194412 909 + 0.436744
rbsU LSA0200 Ribose transport proteinchromosome CDS193092 885 + 0.39548
rpe LSA0694 Ribulose-phosphate 3-epimerasechromosome CDS692835 663 + 0.429864
rpiA LSA1685 Ribose 5-phosphate epimerase (Ribose 5-phosphate isomerase)chromosome CDS1666291 684 + 0.453216
scrA LSA1792 Sucrose-specific phosphotransferase system, enzyme IIBCAchromosome CDS1777212 1941 - 0.381762
scrB LSA1793 Sucrase-6-phosphate hydrolase (Sucrase, Invertase)chromosome CDS1779379 1476 + 0.384146
scrK LSA1790 Fructokinasechromosome CDS1774665 903 - 0.393134
tpi LSA0606 Triosephosphate isomerasechromosome CDS609059 756 + 0.407407
treC LSA1199 Trehalose-6-phosphate phosphoglucohydrolase (Phosphotrehalase)chromosome CDS1179382 1650 - 0.409697
uxaC LSA0129 Glucuronate isomerasechromosome CDS121228 1416 + 0.425141
xpk LSA0289 Xylulose-5-phosphate phosphoketolasechromosome CDS286496 2364 + 0.415398
zwf LSA0381 Glucose-6-phosphate 1-dehydrogenasechromosome CDS387082 1497 + 0.412158