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2024-04-29 18:49:07

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Rhodopseudomonas palustris BisB18, BisB18

Number of genes found: 196

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Rhodopseudomonas palustris BisB18, BisB18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPC_4097 protein of unknown function DUF6, transmembranechromosome CDS4550658 933 + 0.666667
NA RPC_0252 Ribulose-bisphosphate carboxylasechromosome CDS264504 1302 + 0.676651
NA RPC_1503 NmrA-likechromosome CDS1639494 939 + 0.616613
NA RPC_0406 binding-protein-dependent transport systems inner membrane componentchromosome CDS439411 882 + 0.629252
NA RPC_1227 Glycogen debranching enzyme GlgXchromosome CDS1343315 2160 + 0.630093
NA RPC_2181 Drug resistance transporter EmrB/QacA subfamilychromosome CDS2374667 1596 + 0.642231
NA RPC_1433 NAD-dependent epimerase/dehydratasechromosome CDS1557458 984 + 0.629065
NA RPC_1280 Phosphonate metabolism PhnMchromosome CDS1394571 1155 - 0.664935
NA RPC_3778 4-alpha-glucanotransferasechromosome CDS4200463 996 - 0.65261
NA RPC_3880 Cupin 2, conserved barrelchromosome CDS4312755 492 - 0.573171
NA RPC_4766 transketolasechromosome CDS5328136 2061 + 0.669578
NA RPC_4770 Phosphoglycerate kinasechromosome CDS5331991 1197 + 0.67335
NA RPC_1226 Malto-oligosyltrehalose trehalohydrolasechromosome CDS1341269 1821 - 0.663372
NA RPC_4343 Pyruvate, phosphate dikinasechromosome CDS4842308 2976 - 0.657258
NA RPC_3984 NAD-dependent epimerase/dehydratasechromosome CDS4438323 882 - 0.713152
NA RPC_0115 HpcH/HpaI aldolasechromosome CDS130163 792 - 0.683081
NA RPC_2529 Twin-arginine translocation pathway signalchromosome CDS2741529 1017 - 0.6647
NA RPC_2184 Ribulose 1 5-bisphosphate carboxylase large subunit-likechromosome CDS2379182 1107 - 0.672087
NA RPC_3671 6-phosphogluconate dehydrogenase related proteinchromosome CDS4085676 1038 + 0.656069
NA RPC_3739 major facilitator superfamily MFS_1chromosome CDS4164063 1242 - 0.655395
NA RPC_4287 3-beta hydroxysteroid dehydrogenase/isomerasechromosome CDS4785340 894 + 0.588367
NA RPC_1041 transcriptional regulator, DeoR familychromosome CDS1142487 795 - 0.632704
NA RPC_4239 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain IIchromosome CDS4719886 1500 - 0.644
NA RPC_3807 Fructose-6-phosphate phosphoketolasechromosome CDS4235875 2355 - 0.647134
NA RPC_3646 Twin-arginine translocation pathway signalchromosome CDS4055091 1326 - 0.631222
NA RPC_2505 Phosphoglycerate mutasechromosome CDS2716968 576 + 0.710069
NA RPC_4767 glyceraldehyde-3-phosphate dehydrogenase, type Ichromosome CDS5330334 1008 + 0.64881
NA RPC_1972 NmrA-likechromosome CDS2146153 675 + 0.696296
NA RPC_0097 extracellular solute-binding protein, family 1chromosome CDS110786 1305 + 0.662835
NA RPC_3648 Dihydroxy-acid dehydratasechromosome CDS4057774 1800 + 0.656111
NA RPC_4113 phosphoglucosamine mutasechromosome CDS4574714 1353 - 0.668145
NA RPC_0404 extracellular solute-binding protein, family 1chromosome CDS437561 1317 + 0.625664
NA RPC_3342 polysaccharide deacetylasechromosome CDS3699848 1293 + 0.681361
NA RPC_3851 conserved hypothetical proteinchromosome CDS4279915 363 + 0.628099
NA RPC_1141 Phosphoglycerate mutasechromosome CDS1240824 594 + 0.695286
NA RPC_2899 Inositol phosphatase/fructose-1,6-bisphosphatasechromosome CDS3155614 1035 - 0.657005
NA RPC_0490 protein of unknown function DUF6, transmembranechromosome CDS529465 948 + 0.684599
NA RPC_4149 NAD-dependent epimerase/dehydratasechromosome CDS4609775 894 - 0.699105
NA RPC_3166 hypothetical proteinchromosome CDS3510299 675 - 0.69037
NA RPC_1233 phosphoglucomutase, alpha-D-glucose phosphate-specificchromosome CDS1349326 1653 + 0.659407
NA RPC_4899 L-sorbosone dehydrogenasechromosome CDS5468884 1344 + 0.670387
NA RPC_3982 Pyruvate kinasechromosome CDS4436264 1428 + 0.682073
NA RPC_3596 Drug resistance transporter EmrB/QacA subfamilychromosome CDS3997165 1551 + 0.620245
NA RPC_0241 major facilitator superfamily MFS_1chromosome CDS254591 1182 + 0.713198
NA RPC_2815 fructose-1,6-bisphosphatase, class IIchromosome CDS3056668 1002 - 0.673653
NA RPC_3211 Amylo-alpha-1,6-glucosidasechromosome CDS3557263 2199 + 0.657572
NA RPC_2666 V-type H(+)-translocating pyrophosphatasechromosome CDS2894347 2124 + 0.6629
NA RPC_4623 glucokinasechromosome CDS5164035 981 - 0.688073
NA RPC_4891 alpha amylase, catalytic regionchromosome CDS5460084 1617 - 0.660482
NA RPC_0425 polysaccharide deacetylasechromosome CDS456597 1038 + 0.674374
NA RPC_3670 transaldolasechromosome CDS4082795 2853 + 0.656151
NA RPC_0594 PTS system fructose subfamily IIA componentchromosome CDS646017 402 - 0.619403
NA RPC_1700 HpcH/HpaI aldolasechromosome CDS1839667 777 + 0.625483
NA RPC_2280 major facilitator superfamily MFS_1chromosome CDS2479300 1260 + 0.674603
NA RPC_3358 protein of unknown function DUF6, transmembranechromosome CDS3712648 876 - 0.663242
NA RPC_3677 4-alpha-glucanotransferasechromosome CDS4092324 1971 - 0.667174
NA RPC_1364 binding-protein-dependent transport systems inner membrane componentchromosome CDS1488998 903 + 0.630122
NA RPC_2001 Citrate transporterchromosome CDS2176765 1398 + 0.60515
NA RPC_2719 Senescence marker protein-30 (SMP-30)chromosome CDS2951797 924 - 0.651515
NA RPC_0156 protein of unknown function DUF6, transmembranechromosome CDS172559 924 - 0.660173
NA RPC_2494 dihydroxy-acid dehydratasechromosome CDS2704327 1725 + 0.652174
NA RPC_3351 conserved hypothetical proteinchromosome CDS3705407 867 - 0.688581
NA RPC_2388 protein of unknown function UPF0031chromosome CDS2590177 1500 + 0.697333
NA RPC_4585 major facilitator superfamily MFS_1chromosome CDS5118472 1290 - 0.64031
NA RPC_3678 alpha amylase, catalytic regionchromosome CDS4094460 1980 + 0.64899
NA RPC_4163 polysaccharide biosynthesis protein CapDchromosome CDS4625387 1932 - 0.643892
NA RPC_3316 histidine triad (HIT) proteinchromosome CDS3673993 429 + 0.645688
NA RPC_3249 protein of unknown function DUF6, transmembranechromosome CDS3598774 873 - 0.687285
NA RPC_3191 Dihydroxy-acid dehydratasechromosome CDS3531089 1701 - 0.67137
NA RPC_3681 Glycogen debranching enzyme GlgXchromosome CDS4101900 2079 + 0.65368
NA RPC_4629 Hydroxypyruvate reductasechromosome CDS5172437 1323 - 0.714286
NA RPC_4276 NHL repeatchromosome CDS4770955 1632 + 0.655025
NA RPC_2020 protein of unknown function DUF6, transmembranechromosome CDS2203497 966 + 0.557971
NA RPC_2343 polysaccharide deacetylasechromosome CDS2548482 969 - 0.653251
NA RPC_3634 major facilitator superfamily MFS_1chromosome CDS4040942 1698 - 0.687868
NA RPC_1943 Alpha,alpha-trehalose-phosphate synthase (UDP-forming)chromosome CDS2113151 2253 + 0.604083
NA RPC_4524 HAD-superfamily hydrolase subfamily IIBchromosome CDS5049706 837 - 0.677419
NA RPC_0437 NAD-dependent epimerase/dehydratasechromosome CDS471210 1050 + 0.693333
NA RPC_2717 major facilitator superfamily MFS_1chromosome CDS2947204 1365 - 0.623443
NA RPC_2956 Pyruvate kinasechromosome CDS3233587 1509 + 0.685885
NA RPC_4618 protein of unknown function DUF6, transmembranechromosome CDS5157592 861 + 0.600465
NA RPC_3234 TRAP dicarboxylate transporter, DctP subunitchromosome CDS3579665 999 - 0.600601
NA RPC_1450 major facilitator superfamily MFS_1chromosome CDS1576600 1215 + 0.684774
NA RPC_3871 Phosphoenolpyruvate phosphomutasechromosome CDS4302803 960 + 0.539583
NA RPC_2897 transketolasechromosome CDS3152606 2022 - 0.681503
NA RPC_4525 major facilitator superfamily MFS_1chromosome CDS5050548 1482 - 0.664642
NA RPC_0611 Glucose-1-phosphate adenylyltransferasechromosome CDS663720 1263 + 0.623911
NA RPC_0744 protein of unknown function DUF6, transmembranechromosome CDS818517 939 - 0.657082
NA RPC_0896 HAD-superfamily hydrolase, subfamily IIAchromosome CDS993496 855 + 0.679532
NA RPC_4240 N-acylglucosamine 2-epimerasechromosome CDS4721641 1152 + 0.670139
NA RPC_3269 conserved hypothetical proteinchromosome CDS3617311 780 - 0.665385
NA RPC_4707 inositol monophosphatasechromosome CDS5269384 813 - 0.669127
NA RPC_3075 major facilitator superfamily MFS_1chromosome CDS3406124 1488 + 0.657258
NA RPC_1303 PUCC proteinchromosome CDS1416889 1359 + 0.690949
NA RPC_4166 NAD-dependent epimerase/dehydratasechromosome CDS4629530 948 - 0.629747
NA RPC_1611 glycoside hydrolase, family 3-likechromosome CDS1744323 2295 + 0.696296
NA RPC_1048 Aldose 1-epimerasechromosome CDS1150282 894 + 0.64094
NA RPC_4321 dihydroxy-acid dehydratasechromosome CDS4819587 1839 - 0.672104
NA RPC_1047 major facilitator superfamily MFS_1chromosome CDS1148930 1356 + 0.629794
NA RPC_4381 major facilitator superfamily MFS_1chromosome CDS4886528 1287 - 0.625486
NA RPC_0612 Glycogen/starch synthases, ADP-glucose typechromosome CDS664979 1470 + 0.693878
NA RPC_4125 glucose sorbosone dehydrogenasechromosome CDS4587093 1167 + 0.676093
NA RPC_3194 protein of unknown function DUF6, transmembranechromosome CDS3534845 933 - 0.675241
NA RPC_3879 Transketolase-likechromosome CDS4311912 840 - 0.604762
NA RPC_2068 major facilitator superfamily MFS_1chromosome CDS2264188 1188 - 0.632997
NA RPC_3916 hypothetical proteinchromosome CDS4344228 669 - 0.612855
NA RPC_3645 binding-protein-dependent transport systems inner membrane componentchromosome CDS4053842 957 - 0.632184
NA RPC_2183 Cupin 2, conserved barrelchromosome CDS2378695 501 - 0.670659
NA RPC_2478 major facilitator superfamily MFS_1chromosome CDS2686653 1197 + 0.690058
NA RPC_0639 major facilitator superfamily MFS_1chromosome CDS690864 1314 + 0.607306
NA RPC_0413 PTS IIA-like nitrogen-regulatory protein PtsNchromosome CDS444530 462 - 0.65368
NA RPC_4851 PfkBchromosome CDS5412240 930 + 0.68172
NA RPC_4628 conserved hypothetical proteinchromosome CDS5171687 510 - 0.658824
NA RPC_4221 NAD-dependent epimerase/dehydratasechromosome CDS4695533 936 + 0.669872
NA RPC_3644 binding-protein-dependent transport systems inner membrane componentchromosome CDS4052929 921 - 0.626493
NA RPC_1365 binding-protein-dependent transport systems inner membrane componentchromosome CDS1489897 828 + 0.612319
NA RPC_3672 glucose-6-phosphate 1-dehydrogenasechromosome CDS4086710 1515 + 0.641584
NA RPC_0506 protein of unknown function DUF6, transmembranechromosome CDS546077 873 + 0.712486
NA RPC_2121 major facilitator superfamily MFS_1chromosome CDS2319840 1308 + 0.676606
NA RPC_3878 Transketolase, central regionchromosome CDS4310887 1029 - 0.581147
NA RPC_3673 6-phosphogluconolactonasechromosome CDS4088227 729 + 0.696845
NA RPC_0668 Twin-arginine translocation pathway signalchromosome CDS728539 1107 + 0.690154
NA RPC_2710 TRAP dicarboxylate transporter, DctP subunitchromosome CDS2939695 1020 - 0.632353
NA RPC_0700 PfkBchromosome CDS763602 969 - 0.690402
NA RPC_4198 NAD-dependent epimerase/dehydratasechromosome CDS4667408 1038 + 0.646435
NA RPC_0336 phosphoglycerate mutase 1 familychromosome CDS357009 624 + 0.636218
NA RPC_4401 major facilitator superfamily MFS_1chromosome CDS4905595 1260 + 0.704762
NA RPC_2896 Fructose-bisphosphate aldolase, class II, Calvin cycle subtypechromosome CDS3151483 1086 - 0.650092
NA RPC_3679 Trehalose synthase-likechromosome CDS4096451 3300 + 0.647273
NA RPC_2483 Phosphopyruvate hydratasechromosome CDS2691763 1293 + 0.645012
NA RPC_4715 major facilitator superfamily MFS_1chromosome CDS5275837 1287 + 0.682984
NA RPC_4425 transcriptional regulator, DeoR familychromosome CDS4932553 777 - 0.698842
NA RPC_4821 General substrate transporterchromosome CDS5378560 1665 - 0.617417
NA RPC_1240 PUCC proteinchromosome CDS1355294 1455 + 0.670103
NA RPC_0593 HPrNtrchromosome CDS645682 339 - 0.675516
NA RPC_2383 protein of unknown function DUF6, transmembranechromosome CDS2585897 900 + 0.697778
NA RPC_3077 major facilitator superfamily MFS_1chromosome CDS3408668 1371 - 0.611233
NA RPC_1360 transcriptional regulator, DeoR familychromosome CDS1484293 825 + 0.667879
NA RPC_1042 PfkBchromosome CDS1143535 963 + 0.698858
NA RPC_4642 major facilitator superfamily MFS_1chromosome CDS5191115 1647 - 0.651488
NA RPC_3680 1,4-alpha-glucan branching enzymechromosome CDS4099747 2151 + 0.642957
NA RPC_2723 Senescence marker protein-30 (SMP-30)chromosome CDS2956459 924 - 0.606061
NA RPC_0089 major facilitator superfamily MFS_1chromosome CDS100508 1221 + 0.703522
NA RPC_4760 Drug resistance transporter Bcr/CflA subfamilychromosome CDS5323703 1200 - 0.6725
NA RPC_0516 protein of unknown function DUF6, transmembranechromosome CDS558448 900 + 0.667778
NA RPC_0779 Histidinol-phosphate phosphatase, putative, inositol monophosphatasechromosome CDS864139 786 - 0.653944
NA RPC_1161 major facilitator superfamily MFS_1chromosome CDS1264953 1308 + 0.629969
NA RPC_4928 polysaccharide deacetylasechromosome CDS5498493 1107 + 0.663053
NA RPC_3498 major facilitator superfamily MFS_1chromosome CDS3887160 1545 - 0.613592
NA RPC_3682 Malto-oligosyltrehalose synthasechromosome CDS4104270 2781 + 0.665947
NA RPC_2076 ribose 5-phosphate isomerasechromosome CDS2273008 699 + 0.656652
NA RPC_3479 Phosphoglycerate mutasechromosome CDS3864579 789 - 0.679341
NA RPC_4412 protein of unknown function DUF6, transmembranechromosome CDS4919650 906 - 0.673289
NA RPC_4849 histidine triad (HIT) proteinchromosome CDS5410752 420 + 0.659524
NA RPC_3292 Drug resistance transporter Bcr/CflA subfamilychromosome CDS3645125 1293 + 0.668213
NA RPC_2471 Triosephosphate isomerasechromosome CDS2678616 774 + 0.679587
NA RPC_4419 conserved hypothetical proteinchromosome CDS4926291 660 - 0.622727
NA RPC_1075 major facilitator superfamily MFS_1chromosome CDS1177053 1425 + 0.642807
NA RPC_0457 PfkBchromosome CDS493414 1002 - 0.657685
NA RPC_0407 binding-protein-dependent transport systems inner membrane componentchromosome CDS440292 849 + 0.617197
NA RPC_4773 Fructose-bisphosphate aldolasechromosome CDS5333863 1044 + 0.635057
NA RPC_0770 major facilitator superfamily MFS_1chromosome CDS853676 1368 - 0.680556
NA RPC_2741 General substrate transporterchromosome CDS2976684 1296 + 0.646605
NA RPC_3213 major facilitator superfamily MFS_1chromosome CDS3560114 1281 + 0.701795
NA RPC_3510 Methylisocitrate lyasechromosome CDS3901078 921 - 0.638436
NA RPC_4217 NAD-dependent epimerase/dehydratasechromosome CDS4691787 1047 + 0.637058
NA RPC_4861 Glycogen/starch/alpha-glucan phosphorylasechromosome CDS5425343 2517 + 0.645213
NA RPC_0673 polysaccharide deacetylasechromosome CDS734405 750 + 0.626667
NA RPC_1327 Ribulose-bisphosphate carboxylasechromosome CDS1443486 1572 + 0.631679
NA RPC_1045 major facilitator superfamily MFS_1chromosome CDS1146532 1437 + 0.636047
NA RPC_0486 Drug resistance transporter EmrB/QacA subfamilychromosome CDS525540 1563 - 0.643634
NA RPC_0233 Citryl-CoA lyasechromosome CDS247696 879 - 0.67008
NA RPC_2647 major facilitator superfamily MFS_1chromosome CDS2877748 1158 + 0.659758
NA RPC_2067 Twin-arginine translocation pathway signalchromosome CDS2262994 1089 + 0.629017
NA RPC_2715 major facilitator superfamily MFS_1chromosome CDS2944944 1323 - 0.617536
NA RPC_4224 major facilitator superfamily MFS_1chromosome CDS4699403 1236 - 0.682848
NA RPC_3626 Glycogen debranching enzyme GlgXchromosome CDS4032304 2106 + 0.629155
NA RPC_0640 major facilitator superfamily MFS_1chromosome CDS692332 1278 + 0.593897
NA RPC_2895 Ribulose-bisphosphate carboxylasechromosome CDS3150022 1386 - 0.646465
NA RPC_4776 Inositol-1(or 4)-monophosphatasechromosome CDS5336849 789 + 0.665399
NA RPC_3643 NAD-dependent epimerase/dehydratasechromosome CDS4051718 987 - 0.666667
NA RPC_1794 major facilitator superfamily MFS_1chromosome CDS1949785 1578 + 0.695184
NA RPC_3787 PUCC proteinchromosome CDS4210972 1452 - 0.657025
NA RPC_1431 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS1554978 981 + 0.647299
NA RPC_1648 PfkBchromosome CDS1780416 894 - 0.630872
NA RPC_4112 major facilitator superfamily MFS_1chromosome CDS4573313 1194 - 0.649079
NA RPC_1354 Cupin 2, conserved barrelchromosome CDS1474731 510 + 0.65098
NA RPC_4523 Alpha,alpha-trehalose-phosphate synthasechromosome CDS5048064 1470 - 0.655782
NA RPC_4190 ABC transporter relatedchromosome CDS4655763 741 + 0.615385
NA RPC_1614 Ribulose-phosphate 3-epimerasechromosome CDS1748734 696 - 0.66092
NA RPC_4434 Phosphonate metabolism PhnMchromosome CDS4941892 1191 + 0.691016
NA RPC_4380 Dihydroxy-acid dehydratasechromosome CDS4884773 1722 - 0.667247
NA RPC_3341 polysaccharide deacetylasechromosome CDS3698937 771 + 0.662776
NA RPC_4631 D-galactonate transporterchromosome CDS5174853 1314 - 0.649924
NA RPC_2510 Beta-N-acetylhexosaminidasechromosome CDS2722769 1029 + 0.676385
NA RPC_1895 Phosphoglycerate mutasechromosome CDS2067220 561 + 0.7041