Gene list
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COG category: Carbohydrate transport and metabolism
Organism: Syntrophus aciditrophicus SB
Number of genes found: 97
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Syntrophus aciditrophicus SB | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SYN_02257 | 1,4-alpha-glucan branching enzyme | SubName: Full=1,4-alpha-glucan branching enzyme; EC=2.4.1.18; | chromosome | CDS | 585264 | 1989 | - | 0.553042 |
NA | SYN_00938 | phosphomannomutase | SubName: Full=Phosphomannomutase; EC=5.4.2.8; | chromosome | CDS | 1238749 | 1353 | - | 0.512934 |
NA | SYN_01729 | phosphoenolpyruvate-protein phosphotransferase | RecName: Full=Phosphoenolpyruvate-protein phosphotransferase; EC=2.7.3.9; AltName: Full=Phosphotransferase system, enzyme I; | chromosome | CDS | 662274 | 1785 | + | 0.483473 |
NA | SYN_01218 | fosmidomycin resistance protein | SubName: Full=Fosmidomycin resistance protein; | chromosome | CDS | 2476006 | 1167 | + | 0.534704 |
NA | SYN_00621 | phosphoglycerate mutase | SubName: Full=Phosphoglycerate mutase; | chromosome | CDS | 136570 | 1302 | + | 0.604455 |
NA | SYN_02854 | alpha-amylase | SubName: Full=Alpha-amylase; EC=3.2.1.1; | chromosome | CDS | 1335599 | 2706 | - | 0.536216 |
NA | SYN_03170 | transporter, drug/metabolite exporter family | SubName: Full=Transporter, drug/metabolite exporter family; | chromosome | CDS | 1041276 | 372 | - | 0.483871 |
NA | SYN_01112 | UDP-N-acetylglucosamine 4-epimerase | SubName: Full=UDP-N-acetylglucosamine 4-epimerase; EC=5.1.3.7; | chromosome | CDS | 418318 | 1020 | + | 0.606863 |
NA | SYN_01359 | mannose-6-phosphate isomerase | SubName: Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; | chromosome | CDS | 1132927 | 387 | + | 0.524548 |
NA | SYN_00531 | UDP-D-glucuronate carboxy-lyase | SubName: Full=UDP-D-glucuronate carboxy-lyase; EC=4.1.1.35; | chromosome | CDS | 647684 | 933 | - | 0.521972 |
NA | SYN_02951 | glucokinase | SubName: Full=Glucokinase; EC=2.7.1.2; | chromosome | CDS | 773060 | 1014 | - | 0.587771 |
NA | SYN_02383 | phosphoenolpyruvate synthase | SubName: Full=Phosphoenolpyruvate synthase; EC=2.7.9.2; | chromosome | CDS | 176161 | 2724 | + | 0.552129 |
NA | SYN_00943 | nitrogen regulatory IIA protein | SubName: Full=Nitrogen regulatory IIA protein; EC=2.7.1.69; | chromosome | CDS | 1232779 | 462 | + | 0.424242 |
NA | SYN_01331 | glycogen phosphorylase | RecName: Full=Phosphorylase; EC=2.4.1.1; | chromosome | CDS | 1044738 | 2553 | + | 0.542107 |
NA | SYN_03543 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 1425202 | 495 | + | 0.337374 |
NA | SYN_01396 | phosphoglycerate kinase | RecName: Full=Phosphoglycerate kinase; EC=2.7.2.3; | chromosome | CDS | 2042737 | 1272 | - | 0.522799 |
NA | SYN_00760 | hit family hydrolase | SubName: Full=Hit family hydrolase; | chromosome | CDS | 2244507 | 351 | - | 0.475783 |
NA | SYN_01728 | phosphocarrier protein HPr | SubName: Full=Phosphocarrier protein HPr; | chromosome | CDS | 662008 | 270 | + | 0.477778 |
NA | SYN_01763 | ribulose-phosphate 3-epimerase | RecName: Full=Ribulose-phosphate 3-epimerase; EC=5.1.3.1; | chromosome | CDS | 2678264 | 687 | + | 0.588064 |
NA | SYN_02670 | UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase | SubName: Full=UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase; EC=1.1.1.-; EC=4.2.1.-; | chromosome | CDS | 2631838 | 1914 | - | 0.584639 |
NA | SYN_00824 | ABC transporter ATP-binding protein | SubName: Full=ABC transporter ATP-binding protein; | chromosome | CDS | 2320538 | 1287 | + | 0.429681 |
NA | SYN_02514 | hypothetical transporter protein | SubName: Full=Hypothetical transporter protein; | chromosome | CDS | 2456467 | 867 | - | 0.536332 |
NA | SYN_02366 | ribose 5-phosphate isomerase | SubName: Full=Ribose 5-phosphate isomerase; EC=5.3.1.6; | chromosome | CDS | 197144 | 459 | - | 0.559913 |
NA | SYN_00620 | sugar phosphate isomerase/epimerase | SubName: Full=Sugar phosphate isomerase/epimerase; | chromosome | CDS | 135660 | 867 | + | 0.532872 |
NA | SYN_00687 | alpha-amylase | RecName: Full=Alpha-amylase; EC=3.2.1.1; | chromosome | CDS | 2174871 | 1596 | - | 0.463659 |
NA | SYN_00887 | pyrophosphate--fructose 6-phosphate 1-phosphotransferase | SubName: Full=Pyrophosphate--fructose 6-phosphate 1-phosphotransferase; EC=2.7.1.90; | chromosome | CDS | 1672743 | 1392 | + | 0.454023 |
NA | SYN_02950 | glucose-6-phosphate isomerase / glucose-6 phosphate 1-epimerase | RecName: Full=Glucose-6-phosphate isomerase; Short=GPI; EC=5.3.1.9; AltName: Full=Phosphoglucose isomerase; Short=PGI; AltName: Full=Phosphohexose isomerase; Short=PHI; | chromosome | CDS | 774304 | 1641 | - | 0.577087 |
NA | SYN_00585 | GDP-L-fucose synthase | RecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; | chromosome | CDS | 2396271 | 969 | + | 0.534572 |
NA | SYN_01001 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 2054102 | 399 | - | 0.491228 |
NA | SYN_02661 | NAD dependent epimerase/dehydratase family | SubName: Full=NAD dependent epimerase/dehydratase family; | chromosome | CDS | 2642366 | 957 | - | 0.510972 |
NA | SYN_02668 | UDP-glucose 4-epimerase | SubName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; | chromosome | CDS | 2634848 | 1092 | - | 0.606227 |
NA | SYN_02078 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 3146352 | 1257 | - | 0.594272 |
NA | SYN_01243 | phosphoenolpyruvate synthase | SubName: Full=Phosphoenolpyruvate synthase; EC=2.7.9.2; | chromosome | CDS | 2499732 | 3213 | + | 0.501089 |
NA | SYN_02844 | pts system fructose IIA component | SubName: Full=Pts system fructose IIA component; | chromosome | CDS | 1349963 | 468 | - | 0.491453 |
NA | SYN_03712 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 2315872 | 387 | + | 0.54522 |
NA | SYN_02958 | 6-phosphogluconolactonase/glucosamine-6-phosphat eisomerase/deaminase | SubName: Full=6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase; | chromosome | CDS | 764262 | 960 | + | 0.540625 |
NA | SYN_01810 | glyceraldehyde 3-phosphate dehydrogenase | SubName: Full=Glyceraldehyde 3-phosphate dehydrogenase; EC=1.2.1.12; | chromosome | CDS | 2721563 | 999 | - | 0.553554 |
NA | SYN_00295 | glycogen debranching enzyme/alpha-amylase | SubName: Full=Glycogen debranching enzyme/alpha-amylase; EC=3.2.1.1; | chromosome | CDS | 2734824 | 4272 | + | 0.616573 |
NA | SYN_00828 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 2317230 | 444 | + | 0.551802 |
NA | SYN_02628 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | SubName: Full=Alpha,alpha-trehalose-phosphate synthase (UDP-forming); EC=2.4.1.15; | chromosome | CDS | 2836429 | 1554 | - | 0.537323 |
NA | SYN_01034 | polysaccharide deacetylase | SubName: Full=Polysaccharide deacetylase; | chromosome | CDS | 1634441 | 651 | + | 0.479263 |
NA | SYN_02959 | phosphoglucosamine mutase | RecName: Full=Phosphoglucosamine mutase; EC=5.4.2.10; | chromosome | CDS | 762886 | 1350 | + | 0.527407 |
NA | SYN_02140 | oxalate/formate antiporter | SubName: Full=Oxalate/formate antiporter; | chromosome | CDS | 1107405 | 1236 | + | 0.573625 |
NA | SYN_03250 | hypothetical kinase | SubName: Full=Hypothetical kinase; | chromosome | CDS | 270813 | 1647 | + | 0.581056 |
NA | SYN_02085 | multidrug resistance protein B | SubName: Full=Multidrug resistance protein B; | chromosome | CDS | 3138673 | 1362 | - | 0.556535 |
NA | SYN_02648 | CDP-glucose 4,6-dehydratase | SubName: Full=CDP-glucose 4,6-dehydratase; EC=4.2.1.45; | chromosome | CDS | 2655417 | 1125 | - | 0.508444 |
NA | SYN_00886 | 6-phosphofructokinase | SubName: Full=6-phosphofructokinase; EC=2.7.1.11; | chromosome | CDS | 1674233 | 1215 | - | 0.457613 |
NA | SYN_00141 | ribulose-5-phosphate 4-epimerase and related epimerases and aldolases | SubName: Full=Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; | chromosome | CDS | 100886 | 1233 | - | 0.603406 |
NA | SYN_02600 | glycogen phosphorylase | SubName: Full=Glycogen phosphorylase; EC=2.4.1.1; | chromosome | CDS | 458356 | 390 | + | 0.546154 |
NA | SYN_01130 | dTDP-glucose 4,6-dehydratase | SubName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; | chromosome | CDS | 397517 | 996 | + | 0.61747 |
NA | SYN_01343 | phosphoglucomutase | SubName: Full=Phosphoglucomutase; EC=5.4.2.2; | chromosome | CDS | 1284431 | 1689 | - | 0.609236 |
NA | SYN_01220 | macrolide-efflux protein | SubName: Full=Macrolide-efflux protein; | chromosome | CDS | 2478377 | 1614 | + | 0.495043 |
NA | SYN_01447 | transketolase | SubName: Full=Transketolase; EC=2.2.1.1; | chromosome | CDS | 265446 | 2070 | + | 0.614976 |
NA | SYN_01069 | 4-alpha-glucanotransferase | SubName: Full=4-alpha-glucanotransferase; EC=2.4.1.25; | chromosome | CDS | 2796870 | 1506 | - | 0.560425 |
NA | SYN_00891 | phosphoglycerate mutase | SubName: Full=Phosphoglycerate mutase; EC=5.4.2.-; | chromosome | CDS | 1668056 | 1230 | - | 0.486992 |
NA | SYN_02165 | transaldolase | SubName: Full=Transaldolase; EC=2.2.1.2; | chromosome | CDS | 1468396 | 543 | + | 0.500921 |
NA | SYN_00564 | L-threonine 3-dehydrogenase | SubName: Full=L-threonine 3-dehydrogenase; EC=1.1.1.103; | chromosome | CDS | 1137975 | 1044 | + | 0.584291 |
NA | SYN_02630 | sucrose phosphorylase | SubName: Full=Sucrose phosphorylase; EC=2.4.1.7; | chromosome | CDS | 2833244 | 1911 | - | 0.517007 |
NA | SYN_00880 | alpha-amylase | SubName: Full=Alpha-amylase; EC=3.2.1.1; | chromosome | CDS | 864320 | 1188 | + | 0.515152 |
NA | SYN_00502 | hypothetical membrane protein | SubName: Full=Hypothetical membrane protein; | chromosome | CDS | 2125730 | 699 | + | 0.353362 |
NA | SYN_00428 | oxalate/formate antiporter | SubName: Full=Oxalate/formate antiporter; | chromosome | CDS | 698170 | 1329 | - | 0.533484 |
NA | SYN_00111 | mannose-6-phosphate isomerase | SubName: Full=Mannose-6-phosphate isomerase; | chromosome | CDS | 1180486 | 510 | - | 0.447059 |
NA | SYN_01924 | fructose-1,6-bisphosphatase | RecName: Full=Fructose-1,6-bisphosphatase class 1; Short=FBPase class 1; EC=3.1.3.11; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1; | chromosome | CDS | 1875942 | 999 | + | 0.516517 |
NA | SYN_01903 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 1784591 | 960 | + | 0.563542 |
NA | SYN_00877 | glycogen synthase | SubName: Full=Glycogen synthase; EC=2.4.1.21; | chromosome | CDS | 870249 | 1536 | - | 0.531901 |
NA | SYN_00879 | glycogen synthase /glycogen phosphorylase | SubName: Full=Glycogen synthase /glycogen phosphorylase; EC=2.4.1.1; EC=2.4.1.11; | chromosome | CDS | 865521 | 4257 | + | 0.521964 |
NA | SYN_02904 | ampG protein | SubName: Full=AmpG protein; | chromosome | CDS | 826180 | 1293 | - | 0.594741 |
NA | SYN_02656 | ABC-type polysaccharide/polyol phosphate transport protein, ATPase component | SubName: Full=ABC-type polysaccharide/polyol phosphate transport protein, ATPase component; | chromosome | CDS | 2647738 | 1368 | - | 0.428363 |
NA | SYN_02933 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 1619447 | 486 | + | 0.483539 |
NA | SYN_03790 | triosephosphate isomerase | RecName: Full=Triosephosphate isomerase; EC=5.3.1.1; | chromosome | CDS | 2746197 | 393 | + | 0.572519 |
NA | SYN_02345 | hypothetical membrane protein | SubName: Full=Hypothetical membrane protein; | chromosome | CDS | 513515 | 525 | + | 0.504762 |
NA | SYN_00298 | glycogen phosphorylase | RecName: Full=Phosphorylase; EC=2.4.1.1; | chromosome | CDS | 2731294 | 2133 | - | 0.550399 |
NA | SYN_00622 | alpha,alpha-trehalose-phosphate synthase [UDP-forming] / trehalose 6-phosphate phosphatase | SubName: Full=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] / trehalose 6-phosphate phosphatase; EC=2.4.1.15; EC=3.1.3.12; | chromosome | CDS | 137822 | 2247 | + | 0.598576 |
NA | SYN_02953 | pyrophosphate--fructose 6-phosphate 1-phosphotransferase | SubName: Full=Pyrophosphate--fructose 6-phosphate 1-phosphotransferase; EC=2.7.1.90; | chromosome | CDS | 770127 | 1305 | + | 0.571648 |
NA | SYN_02880 | glycogen phosphorylase | RecName: Full=Phosphorylase; EC=2.4.1.1; | chromosome | CDS | 2017322 | 2508 | - | 0.537879 |
NA | SYN_02983 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 2746081 | 120 | + | 0.558333 |
NA | SYN_00231 | glycogen phosphorylase | RecName: Full=Phosphorylase; EC=2.4.1.1; | chromosome | CDS | 3088381 | 2520 | + | 0.519444 |
NA | SYN_02966 | phosphoenolpyruvate synthase | RecName: Full=Phosphoenolpyruvate synthase; Short=PEP synthase; EC=2.7.9.2; AltName: Full=Pyruvate, water dikinase; | chromosome | CDS | 753655 | 2412 | - | 0.475539 |
NA | SYN_00035 | permease of the DMT superfamily | SubName: Full=Permease of the DMT superfamily; | chromosome | CDS | 60184 | 876 | + | 0.569635 |
NA | SYN_00869 | glycerate dehydrogenase / hydroxypyruvate reductase | SubName: Full=Glycerate dehydrogenase / hydroxypyruvate reductase; EC=1.1.1.29; EC=1.1.1.81; | chromosome | CDS | 2820919 | 1317 | - | 0.584662 |
NA | SYN_00858 | polysaccharide deacetylase | SubName: Full=Polysaccharide deacetylase; | chromosome | CDS | 2521611 | 900 | + | 0.537778 |
NA | SYN_01340 | endonuclease IV | SubName: Full=Endonuclease IV; EC=3.1.21.2; | chromosome | CDS | 1281660 | 795 | + | 0.568553 |
NA | SYN_01002 | phosphoglycerate mutase | SubName: Full=Phosphoglycerate mutase; EC=5.4.2.-; | chromosome | CDS | 2054715 | 1599 | + | 0.534084 |
NA | SYN_01932 | glucose/sorbosone dehydrogenase | SubName: Full=Glucose/sorbosone dehydrogenase; | chromosome | CDS | 1884887 | 1257 | + | 0.526651 |
NA | SYN_02689 | UDP-N-acetylglucosamine 4,6-dehydratase / UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase | SubName: Full=UDP-N-acetylglucosamine 4,6-dehydratase / UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; EC=1.1.1.-; EC=4.2.1.-; | chromosome | CDS | 2604973 | 1935 | - | 0.593282 |
NA | SYN_02874 | ribokinase | SubName: Full=Ribokinase; EC=2.7.1.15; | chromosome | CDS | 2009294 | 945 | + | 0.577778 |
NA | SYN_00391 | ABC-type sugar transport system, periplasmic component | SubName: Full=ABC-type sugar transport system, periplasmic component; | chromosome | CDS | 1069555 | 999 | + | 0.421421 |
NA | SYN_00928 | myo-inositol-1(or 4)-monophosphatase | SubName: Full=Myo-inositol-1(Or 4)-monophosphatase; EC=3.1.3.25; | chromosome | CDS | 2310315 | 831 | + | 0.547533 |
NA | SYN_01980 | phosphoheptose isomerase | RecName: Full=Phosphoheptose isomerase; EC=5.3.1.28; AltName: Full=Sedoheptulose 7-phosphate isomerase; | chromosome | CDS | 1936600 | 585 | - | 0.504274 |
NA | SYN_02954 | fructose-bisphosphate aldolase | SubName: Full=Fructose-bisphosphate aldolase; EC=4.1.2.13; | chromosome | CDS | 769105 | 1026 | + | 0.578947 |
NA | SYN_02952 | pyruvate kinase | RecName: Full=Pyruvate kinase; EC=2.7.1.40; | chromosome | CDS | 771519 | 1428 | + | 0.579132 |
NA | SYN_01733 | enolase | RecName: Full=Enolase; EC=4.2.1.11; AltName: Full=2-phospho-D-glycerate hydro-lyase; AltName: Full=2-phosphoglycerate dehydratase; | chromosome | CDS | 665729 | 1287 | - | 0.527584 |
NA | SYN_02641 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 | SubName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; | chromosome | CDS | 2661956 | 1209 | + | 0.599669 |
NA | SYN_02627 | trehalose 6-phosphate phosphatase | RecName: Full=Trehalose 6-phosphate phosphatase; EC=3.1.3.12; | chromosome | CDS | 2837922 | 834 | - | 0.568345 |
NA | SYN_02761 | glycogen phosphorylase | SubName: Full=Glycogen phosphorylase; EC=2.4.1.1; | chromosome | CDS | 921728 | 2547 | - | 0.608952 |
NA | SYN_03220 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 1468923 | 126 | + | 0.428571 |
NA | SYN_01708 | dihydroxy-acid dehydratase | RecName: Full=Dihydroxy-acid dehydratase; Short=DAD; EC=4.2.1.9; | chromosome | CDS | 2986593 | 1662 | + | 0.573406 |