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2024-05-07 18:38:40

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Rhodopseudomonas palustris HaA2, HaA2

Number of genes found: 210

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Rhodopseudomonas palustris HaA2, HaA2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPB_4471 Fructose-bisphosphate aldolasechromosome CDS5061218 1041 + 0.650336
NA RPB_3722 conserved hypothetical proteinchromosome CDS4259227 822 - 0.705596
NA RPB_3109 Cupin regionchromosome CDS3542544 528 + 0.653409
NA RPB_2783 Major facilitator superfamily MFS_1chromosome CDS3173039 1230 - 0.673984
NA RPB_1882 1,4-alpha-glucan branching enzymechromosome CDS2149038 2151 - 0.65179
NA RPB_1903 gluconolactonase precursorchromosome CDS2176785 930 + 0.674194
NA RPB_0442 Glucose-1-phosphate adenylyltransferasechromosome CDS486114 1347 - 0.64291
NA RPB_2095 Dihydroxy-acid dehydratasechromosome CDS2380537 1809 - 0.667219
NA RPB_3211 Pyrrolo-quinoline quinonechromosome CDS3672616 2514 + 0.681782
NA RPB_3231 conserved hypothetical proteinchromosome CDS3694488 1713 + 0.660829
NA RPB_1294 Glucose sorbosone dehydrogenasechromosome CDS1476471 1176 - 0.692177
NA RPB_0671 PfkBchromosome CDS755460 930 + 0.683871
NA RPB_1999 conserved hypothetical proteinchromosome CDS2270903 837 - 0.686977
NA RPB_4031 PucC protein, chlorophyll MFS exporterchromosome CDS4600978 1422 - 0.676512
NA RPB_0163 NmrA-like proteinchromosome CDS175990 672 - 0.715774
NA RPB_4215 ABC transporter relatedchromosome CDS4787696 1104 - 0.663043
NA RPB_0441 Glycogen/starch synthases, ADP-glucose typechromosome CDS484669 1449 - 0.694962
NA RPB_1888 Carbohydrate kinase, thermoresistant glucokinasechromosome CDS2161230 537 - 0.674115
NA RPB_2405 Histidine triad (HIT) proteinchromosome CDS2758715 429 - 0.648019
NA RPB_1322 Protein of unknown function DUF6, transmembranechromosome CDS1508850 906 - 0.677704
NA RPB_0795 L-sorbosone dehydrogenasechromosome CDS892288 1344 - 0.699405
NA RPB_3811 NAD-dependent epimerase/dehydratasechromosome CDS4348909 939 - 0.641108
NA RPB_0581 PfkBchromosome CDS654151 1002 - 0.687625
NA RPB_0917 Alpha,alpha-trehalose-phosphate synthasechromosome CDS1058173 1485 + 0.661953
NA RPB_3708 hypothetical proteinchromosome CDS4246096 294 + 0.588435
NA RPB_0947 Inositol phosphatase/fructose-1,6-bisphosphatasechromosome CDS1094940 1032 + 0.675388
NA RPB_2618 NmrA-like proteinchromosome CDS3000159 885 - 0.712994
NA RPB_3253 Protein of unknown function DUF6, transmembranechromosome CDS3719812 933 - 0.675241
NA RPB_0771 Polysaccharide deacetylasechromosome CDS864102 1059 - 0.675165
NA RPB_4218 transcriptional regulator, DeoR familychromosome CDS4791697 855 - 0.654971
NA RPB_2362 Protein of unknown function DUF6, transmembranechromosome CDS2716275 876 + 0.697489
NA RPB_3329 TRAP dicarboxylate transporter DctP subunitchromosome CDS3808239 999 - 0.601602
NA RPB_1881 Glycogen debranching enzyme GlgXchromosome CDS2146960 2076 - 0.646917
NA RPB_1325 Protein of unknown function DUF6, transmembranechromosome CDS1511504 921 - 0.679696
NA RPB_2691 General substrate transporterchromosome CDS3074952 1338 + 0.650224
NA RPB_1034 Amylo-alpha-1,6-glucosidasechromosome CDS1187399 2196 + 0.677596
NA RPB_3496 MFS transporterchromosome CDS4000359 1596 - 0.693609
NA RPB_4467 glyceraldehyde-3-phosphate dehydrogenase, type Ichromosome CDS5058132 1008 + 0.646825
NA RPB_2549 ABC transporter relatedchromosome CDS2924051 1101 + 0.640327
NA RPB_2500 Polysaccharide deacetylasechromosome CDS2861883 936 - 0.648504
NA RPB_1889 6-phosphogluconolactonasechromosome CDS2161756 747 - 0.706827
NA RPB_2377 Polysaccharide deacetylasechromosome CDS2730447 1320 - 0.699242
NA RPB_3611 Hydroxypyruvate isomerasechromosome CDS4147160 783 - 0.651341
NA RPB_1554 NAD-dependent epimerase/dehydratasechromosome CDS1751867 1017 + 0.611603
NA RPB_0334 conserved hypothetical proteinchromosome CDS379097 1188 - 0.711279
NA RPB_4499 hypothetical proteinchromosome CDS5087849 645 + 0.536434
NA RPB_2067 ROKchromosome CDS2349091 945 + 0.733333
NA RPB_0200 Oxalate decarboxylasechromosome CDS223625 1137 - 0.632366
NA RPB_1890 glucose-6-phosphate 1-dehydrogenasechromosome CDS2162499 1515 - 0.638944
NA RPB_0669 Histidine triad (HIT) proteinchromosome CDS754110 417 + 0.664269
NA RPB_0078 conserved hypothetical proteinchromosome CDS81424 477 + 0.631027
NA RPB_0445 Glycoside hydrolase, family 4chromosome CDS491316 1281 + 0.67057
NA RPB_4155 conserved hypothetical proteinchromosome CDS4729650 150 - 0.606667
NA RPB_1879 Malto-oligosyltrehalose synthasechromosome CDS2142414 2787 - 0.668102
NA RPB_1551 NAD-dependent epimerase/dehydratasechromosome CDS1748465 909 + 0.674367
NA RPB_1886 Glycoside hydrolase 15-relatedchromosome CDS2158605 1806 + 0.653378
NA RPB_1892 transaldolasechromosome CDS2165111 2853 - 0.657553
NA RPB_0653 PTS IIA-like nitrogen-regulatory protein PtsNchromosome CDS737632 462 - 0.670996
NA RPB_4468 Phosphoglycerate kinasechromosome CDS5059264 1197 + 0.675856
NA RPB_1526 NAD-dependent epimerase/dehydratasechromosome CDS1719117 954 + 0.604822
NA RPB_0664 Major facilitator superfamily MFS_1chromosome CDS748612 1371 + 0.679066
NA RPB_3328 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS3807593 561 - 0.636364
NA RPB_0650 ABC transporter relatedchromosome CDS735491 1095 + 0.672146
NA RPB_3812 Sugar isomerase (SIS)chromosome CDS4350063 687 - 0.665211
NA RPB_0649 Binding-protein-dependent transport systems inner membrane componentchromosome CDS734638 849 + 0.613663
NA RPB_3580 TRAP dicarboxylate transporter DctM subunitchromosome CDS4104303 1311 - 0.655988
NA RPB_3905 Major facilitator superfamily MFS_1chromosome CDS4456912 1251 - 0.695444
NA RPB_1089 conserved hypothetical proteinchromosome CDS1250708 228 + 0.622807
NA RPB_2096 ABC transporter relatedchromosome CDS2382584 1065 + 0.657277
NA RPB_0175 Binding-protein-dependent transport systems inner membrane componentchromosome CDS189933 837 - 0.647551
NA RPB_1528 NAD-dependent epimerase/dehydratasechromosome CDS1721267 1014 + 0.63215
NA RPB_2449 MFS transporterchromosome CDS2804705 1275 + 0.676078
NA RPB_1625 Major facilitator superfamily MFS_1chromosome CDS1831357 1203 + 0.688279
NA RPB_2009 Drug resistance transporter Bcr/CflA subfamilychromosome CDS2285847 1290 - 0.68062
NA RPB_0174 extracellular solute-binding protein, family 1chromosome CDS188622 1281 - 0.633099
NA RPB_1010 Glycoside hydrolase, family 5chromosome CDS1157846 1323 + 0.678005
NA RPB_0660 dehydrogenasechromosome CDS744542 966 + 0.682195
NA RPB_3858 Fructose-6-phosphate phosphoketolasechromosome CDS4411322 2355 - 0.64586
NA RPB_2263 Phosphoglycerate/bisphosphoglycerate mutasechromosome CDS2611593 762 + 0.673228
NA RPB_0916 trehalose-6-phosphatasechromosome CDS1057231 807 + 0.666667
NA RPB_4474 Inositol-1(or 4)-monophosphatasechromosome CDS5064140 789 + 0.680608
NA RPB_0949 transketolasechromosome CDS1096914 2016 + 0.687004
NA RPB_3889 Class II aldolase/adducin-likechromosome CDS4442769 753 - 0.666667
NA RPB_0466 PTS system fructose subfamily IIA componentchromosome CDS514079 402 + 0.609453
NA RPB_4517 Histidinol-phosphate phosphatase, putative, inositol monophosphatasechromosome CDS5104901 783 + 0.673052
NA RPB_3964 Ribulose-bisphosphate carboxylase form I large subunit CbbLchromosome CDS4525057 1458 - 0.639918
NA RPB_0262 sugar nucleotide dehydratasechromosome CDS295742 954 + 0.644654
NA RPB_4216 ABC transporter relatedchromosome CDS4788812 1080 - 0.683333
NA RPB_1423 pyruvate kinasechromosome CDS1610469 1434 - 0.672943
NA RPB_4214 Binding-protein-dependent transport systems inner membrane componentchromosome CDS4786794 903 - 0.629014
NA RPB_0208 Major facilitator superfamily MFS_1chromosome CDS234162 1584 + 0.660985
NA RPB_1524 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerasechromosome CDS1716461 1413 - 0.623496
NA RPB_3521 Class II aldolase/adducin-likechromosome CDS4029350 780 + 0.647436
NA RPB_3327 TRAP dicarboxylate transporter DctM subunitchromosome CDS3806304 1293 - 0.634957
NA RPB_2098 Binding-protein-dependent transport systems inner membrane componentchromosome CDS2385365 954 + 0.637317
NA RPB_2378 Polysaccharide deacetylasechromosome CDS2731881 798 - 0.672932
NA RPB_1606 conserved hypothetical proteinchromosome CDS1810787 960 - 0.659375
NA RPB_4566 General substrate transporterchromosome CDS5165032 1665 + 0.643243
NA RPB_1853 Inositol-1(or 4)-monophosphatasechromosome CDS2119099 762 + 0.661417
NA RPB_2548 Binding-protein-dependent transport systems inner membrane componentchromosome CDS2923132 915 + 0.612022
NA RPB_2795 triosephosphate isomerasechromosome CDS3185514 786 - 0.667939
NA RPB_1885 4-alpha-glucanotransferasechromosome CDS2156642 1974 + 0.660588
NA RPB_0950 fructose-bisphosphate aldolase, class II, Calvin cycle subtypechromosome CDS1098987 1086 + 0.651013
NA RPB_3227 rubisco-like protein Rlp1chromosome CDS3687439 1104 - 0.711051
NA RPB_1642 glyceraldehyde-3-phosphate dehydrogenase, type Ichromosome CDS1871951 1044 + 0.638889
NA RPB_0243 MFS permeasechromosome CDS276777 1308 + 0.654434
NA RPB_3391 TRAP C4-dicarboxylate transport system permease DctM subunitchromosome CDS3875035 1842 + 0.652552
NA RPB_4634 Major facilitator superfamily MFS_1chromosome CDS5237067 1416 - 0.673729
NA RPB_2328 Cupin regionchromosome CDS2676675 504 - 0.654762
NA RPB_1652 Class II aldolase/adducin-likechromosome CDS1882051 774 - 0.655039
NA RPB_1602 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS1805262 981 + 0.641182
NA RPB_0081 permeases of the drug/metabolite transporter (DMT) superfamilychromosome CDS83751 972 + 0.694444
NA RPB_3991 light harvesting pigment MFS transporter Bch2chromosome CDS4557829 1344 - 0.675595
NA RPB_4679 Major facilitator superfamily MFS_1chromosome CDS5292705 1242 - 0.681965
NA RPB_1891 6-phosphogluconate dehydrogenase related proteinchromosome CDS2164010 1038 - 0.67341
NA RPB_2748 Beta-N-acetylhexosaminidasechromosome CDS3131522 1026 - 0.658869
NA RPB_4443 hypothetical proteinchromosome CDS5030072 438 - 0.589041
NA RPB_2860 Glycosyl transferase, family 2chromosome CDS3260290 2700 + 0.64963
NA RPB_1981 Drug resistance transporter EmrB/QacA subfamilychromosome CDS2250567 1587 + 0.640832
NA RPB_3511 Polysaccharide deacetylasechromosome CDS4019329 1041 + 0.691643
NA RPB_0646 extracellular solute-binding protein, family 1chromosome CDS731907 1326 + 0.639517
NA RPB_3004 Protein of unknown function DUF6, transmembranechromosome CDS3421877 927 - 0.633225
NA RPB_2100 NAD-dependent epimerase/dehydratasechromosome CDS2387545 987 + 0.680851
NA RPB_4332 Major facilitator superfamily MFS_1chromosome CDS4916328 1275 + 0.694902
NA RPB_0915 MFS transporterchromosome CDS1055753 1482 + 0.653846
NA RPB_3654 PfkBchromosome CDS4194691 903 + 0.643411
NA RPB_2196 NAD(+) kinasechromosome CDS2489806 780 - 0.679487
NA RPB_0341 Citryl-CoA lyasechromosome CDS386284 879 + 0.703072
NA RPB_2368 conserved hypothetical proteinchromosome CDS2724169 870 + 0.705747
NA RPB_2170 Major facilitator superfamily MFS_1chromosome CDS2465193 1119 + 0.705094
NA RPB_0176 Binding-protein-dependent transport systems inner membrane componentchromosome CDS190766 945 - 0.667725
NA RPB_2999 Major facilitator superfamily MFS_1chromosome CDS3413803 1227 + 0.696822
NA RPB_1839 Major facilitator superfamily MFS_1chromosome CDS2105084 1209 + 0.707196
NA RPB_0507 Protein of unknown function DUF6, transmembranechromosome CDS568594 870 - 0.709195
NA RPB_0844 Glycogen/starch/alpha-glucan phosphorylasechromosome CDS959970 2511 - 0.663879
NA RPB_1643 Major facilitator superfamily MFS_1chromosome CDS1872997 1230 + 0.64878
NA RPB_3689 ribulose-phosphate 3-epimerasechromosome CDS4229098 699 + 0.656652
NA RPB_1880 Malto-oligosyltrehalose trehalohydrolasechromosome CDS2145200 1764 - 0.664399
NA RPB_0300 rubisco-like protein Rlp2chromosome CDS340254 1296 - 0.69213
NA RPB_0467 HPrNtrchromosome CDS514477 327 + 0.681957
NA RPB_4209 conserved hypothetical proteinchromosome CDS4781728 306 + 0.689542
NA RPB_1676 Major facilitator superfamily MFS_1chromosome CDS1907753 1236 + 0.67233
NA RPB_3034 Protein of unknown function DUF6, transmembranechromosome CDS3456573 897 - 0.693422
NA RPB_1711 HpcH/HpaI aldolasechromosome CDS1946174 777 + 0.637066
NA RPB_3567 Hydroxypyruvate reductasechromosome CDS4088395 1281 + 0.724434
NA RPB_1884 Alpha amylasechromosome CDS2154499 2055 - 0.624817
NA RPB_0810 Alpha amylasechromosome CDS925461 1623 + 0.675293
NA RPB_0250 Protein of unknown function DUF6, transmembranechromosome CDS282824 915 - 0.676503
NA RPB_3680 conserved hypothetical proteinchromosome CDS4219643 528 - 0.626894
NA RPB_2254 Glycogen debranching enzyme GlgXchromosome CDS2600267 2202 - 0.637602
NA RPB_4039 phosphoglucomutase, alpha-D-glucose phosphate-specificchromosome CDS4609039 1653 - 0.670901
NA RPB_2425 indole-3-pyruvate decarboxylasechromosome CDS2781519 1632 + 0.678922
NA RPB_3386 ribose 5-phosphate isomerasechromosome CDS3870885 699 - 0.669528
NA RPB_1702 Major facilitator superfamily MFS_1chromosome CDS1936218 1248 + 0.684295
NA RPB_3228 conserved hypothetical proteinchromosome CDS3688621 1218 - 0.681445
NA RPB_1099 Pyruvate, phosphate dikinasechromosome CDS1260740 3015 + 0.662023
NA RPB_4466 transketolasechromosome CDS5056019 1989 + 0.677225
NA RPB_2965 fructose-1,6-bisphosphatase, class IIchromosome CDS3376128 1005 - 0.673632
NA RPB_2655 conserved hypothetical proteinchromosome CDS3037153 432 + 0.68287
NA RPB_2866 Protein of unknown function DUF6, transmembranechromosome CDS3265354 882 + 0.656463
NA RPB_2663 Polysaccharide deacetylasechromosome CDS3046893 1047 + 0.680993
NA RPB_0436 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independentchromosome CDS478894 1515 - 0.671947
NA RPB_1182 HAD-superfamily hydrolase, subfamily IIAchromosome CDS1355189 855 - 0.687719
NA RPB_4025 conserved hypothetical proteinchromosome CDS4592817 477 - 0.675052
NA RPB_2097 Twin-arginine translocation pathway signalchromosome CDS2383749 1326 + 0.64178
NA RPB_0523 Protein of unknown function DUF6, transmembranechromosome CDS584355 918 - 0.668845
NA RPB_0189 conserved hypothetical proteinchromosome CDS208007 1620 + 0.66358
NA RPB_0118 conserved hypothetical proteinchromosome CDS129405 1689 + 0.715808
NA RPB_1604 NAD-dependent epimerase/dehydratasechromosome CDS1807772 1956 + 0.620143
NA RPB_2099 Binding-protein-dependent transport systems inner membrane componentchromosome CDS2386327 924 + 0.627706
NA RPB_1307 phosphoglucosamine mutasechromosome CDS1488646 1353 + 0.671101
NA RPB_4678 Major facilitator superfamily MFS_1chromosome CDS5291396 1215 - 0.688889
NA RPB_0245 conserved hypothetical proteinchromosome CDS279177 1152 - 0.639757
NA RPB_3627 Beta-glucosidasechromosome CDS4162894 1377 + 0.643428
NA RPB_1523 phosphomannomutase Cchromosome CDS1714870 1497 - 0.641283
NA RPB_1532 hypothetical proteinchromosome CDS1725551 1482 + 0.652497
NA RPB_0951 Ribulose-bisphosphate carboxylase form II CbbMchromosome CDS1100131 1386 + 0.642136
NA RPB_4664 extracellular solute-binding protein, family 1chromosome CDS5275273 1347 - 0.64588
NA RPB_1883 Trehalose synthasechromosome CDS2151185 3303 - 0.646382
NA RPB_3582 TRAP dicarboxylate transporter DctP subunitchromosome CDS4106343 1026 - 0.635478
NA RPB_2858 putative beta (1-6) glucans synthasechromosome CDS3257608 1677 - 0.651759
NA RPB_3342 Protein of unknown function DUF6, transmembranechromosome CDS3823447 876 - 0.695205
NA RPB_1600 phosphoheptose isomerasechromosome CDS1803347 585 - 0.700855
NA RPB_0927 conserved hypothetical proteinchromosome CDS1070711 375 - 0.632
NA RPB_4446 PucC chlorophyll MFS exporterchromosome CDS5031484 1422 - 0.682841
NA RPB_0177 ABC transporter relatedchromosome CDS191703 1158 - 0.692573
NA RPB_3195 Major facilitator superfamily MFS_1chromosome CDS3653294 1473 + 0.674134
NA RPB_2415 Major facilitator superfamily MFS_1chromosome CDS2767364 1248 + 0.717949
NA RPB_1021 Alpha,alpha-trehalose-phosphate synthase (UDP-forming)chromosome CDS1170697 2217 - 0.664411
NA RPB_2546 Twin-arginine translocation pathway signalchromosome CDS2920669 1386 + 0.656566
NA RPB_2113 Major facilitator superfamily MFS_1chromosome CDS2403343 1284 - 0.692368
NA RPB_4066 dihydroxy-acid dehydratasechromosome CDS4638581 1860 - 0.669355
NA RPB_4211 extracellular solute-binding protein, family 1chromosome CDS4783668 1797 - 0.6266
NA RPB_3169 Pyruvate kinasechromosome CDS3626139 1479 + 0.69236
NA RPB_4213 Binding-protein-dependent transport systems inner membrane componentchromosome CDS4785988 807 - 0.630731
NA RPB_2970 conserved hypothetical proteinchromosome CDS3382635 363 - 0.710744
NA RPB_2778 enolasechromosome CDS3165621 1284 - 0.648754
NA RPB_0648 Binding-protein-dependent transport systems inner membrane componentchromosome CDS733757 882 + 0.645125
NA RPB_0444 PfkBchromosome CDS490104 939 - 0.70394
NA RPB_2545 Protein of unknown function DUF6, transmembranechromosome CDS2919419 900 + 0.72
NA RPB_2685 TrapT dctQ-M fusion permease, dicarboxylate transportchromosome CDS3068033 1884 - 0.674628
NA RPB_2547 Binding-protein-dependent transport systems inner membrane componentchromosome CDS2922194 939 + 0.629393
NA RPB_2686 TRAP dicarboxylate transporter DctP subunitchromosome CDS3069926 1020 - 0.64902
NA RPB_1440 conserved hypothetical proteinchromosome CDS1628986 288 + 0.635417
NA RPB_3247 Dihydroxy-acid dehydratasechromosome CDS3709231 1710 - 0.677778
NA RPB_3263 transcriptional regulator, AraC familychromosome CDS3733266 825 - 0.68
NA RPB_4685 Major facilitator superfamily MFS_1chromosome CDS5299921 1287 - 0.679876
NA RPB_1308 Major facilitator superfamily MFS_1chromosome CDS1490181 1263 + 0.66825
NA RPB_1490 Major facilitator superfamily MFS_1chromosome CDS1680232 1284 - 0.675234
NA RPB_3523 conserved hypothetical proteinchromosome CDS4031991 297 - 0.737374