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2024-05-06 08:52:18

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Frankia sp. CcI3, CcI3

Number of genes found: 193

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Frankia sp. CcI3, CcI3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Francci3_2645 Phosphoglycerate mutasechromosome CDS3120354 828 - 0.731884
NA Francci3_4404 conserved hypothetical proteinchromosome CDS5266512 438 - 0.707763
NA Francci3_1162 ribose 5-phosphate isomerasechromosome CDS1385328 489 + 0.701432
NA Francci3_4395 Alpha,alpha-trehalose-phosphate synthase (UDP-forming)chromosome CDS5252418 1686 + 0.738434
NA Francci3_3506 conserved hypothetical proteinchromosome CDS4187054 1338 + 0.686846
NA Francci3_2915 hypothetical proteinchromosome CDS3434358 1590 - 0.727044
NA Francci3_0930 glycosyltransferase, MGT familychromosome CDS1087983 1191 + 0.731318
NA Francci3_4154 Drug resistance transporter EmrB/QacA subfamilychromosome CDS4954306 1452 + 0.7073
NA Francci3_0123 hypothetical proteinchromosome CDS153065 1467 - 0.64758
NA Francci3_1150 alpha amylase, catalytic regionchromosome CDS1366651 1905 - 0.727559
NA Francci3_3874 polysaccharide deacetylasechromosome CDS4637301 846 + 0.702128
NA Francci3_1478 Alpha,alpha-trehalose-phosphate synthase (UDP-forming)chromosome CDS1771355 1533 + 0.693412
NA Francci3_3458 hypothetical proteinchromosome CDS4122133 1950 + 0.668205
NA Francci3_0408 major facilitator superfamily MFS_1chromosome CDS480245 1332 + 0.698198
NA Francci3_2134 conserved hypothetical proteinchromosome CDS2502380 414 - 0.649758
NA Francci3_1347 Malto-oligosyltrehalose trehalohydrolasechromosome CDS1617582 1782 - 0.718294
NA Francci3_2757 Drug resistance transporter EmrB/QacA subfamilychromosome CDS3248775 1503 - 0.71324
NA Francci3_4150 protein of unknown function DUF1205chromosome CDS4949868 672 - 0.706845
NA Francci3_2252 extracellular solute-binding protein, family 1chromosome CDS2629297 1410 + 0.697872
NA Francci3_4361 NAD-dependent epimerase/dehydratasechromosome CDS5208561 1296 - 0.740741
NA Francci3_2655 Methylisocitrate lyasechromosome CDS3134964 879 - 0.730375
NA Francci3_2086 Drug resistance transporter EmrB/QacA subfamilychromosome CDS2452317 1476 + 0.697832
NA Francci3_0293 hypothetical proteinchromosome CDS339572 1332 - 0.708709
NA Francci3_1647 glucose-6-phosphate 1-dehydrogenasechromosome CDS1980051 1533 - 0.704501
NA Francci3_1313 Inositol-1(or 4)-monophosphatasechromosome CDS1575280 807 - 0.760843
NA Francci3_2110 major facilitator superfamily MFS_1chromosome CDS2475884 1383 + 0.714389
NA Francci3_3671 hypothetical proteinchromosome CDS4397966 1842 - 0.696526
NA Francci3_4347 glycoside hydrolase family 65, central catalyticchromosome CDS5188732 2415 - 0.69234
NA Francci3_3979 Drug resistance transporter EmrB/QacA subfamilychromosome CDS4761087 1584 - 0.713384
NA Francci3_1152 NmrA-likechromosome CDS1371157 1533 - 0.721461
NA Francci3_3679 Trehalose synthase-likechromosome CDS4413069 1725 + 0.641739
NA Francci3_1554 major facilitator superfamily MFS_1chromosome CDS1863193 1833 + 0.666667
NA Francci3_2013 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-likechromosome CDS2364603 504 + 0.722222
NA Francci3_2900 putative integral membrane proteinchromosome CDS3414536 930 + 0.698925
NA Francci3_1564 NAD-dependent epimerase/dehydratasechromosome CDS1876245 1041 + 0.653218
NA Francci3_1438 Phosphoglycerate mutasechromosome CDS1731165 1137 + 0.73263
NA Francci3_3551 NAD-dependent epimerase/dehydratasechromosome CDS4247270 951 - 0.648791
NA Francci3_0468 phosphoglycerate mutase 1 familychromosome CDS548258 1002 + 0.706587
NA Francci3_1651 putative transporterchromosome CDS1985492 294 + 0.653061
NA Francci3_1648 transaldolasechromosome CDS1981726 1116 - 0.697133
NA Francci3_0724 ABC-2chromosome CDS833482 957 - 0.666667
NA Francci3_0463 binding-protein-dependent transport systems inner membrane componentchromosome CDS541572 966 + 0.710145
NA Francci3_0165 polysaccharide deacetylasechromosome CDS194831 684 - 0.671053
NA Francci3_3923 Phosphopyruvate hydratasechromosome CDS4690449 1284 - 0.69704
NA Francci3_1276 Pyruvate, phosphate dikinasechromosome CDS1523879 2694 + 0.708612
NA Francci3_1157 4-alpha-glucanotransferasechromosome CDS1377727 2274 + 0.753298
NA Francci3_3243 Phosphoglycerate mutasechromosome CDS3837648 714 + 0.738095
NA Francci3_2070 Fructose-bisphosphate aldolasechromosome CDS2434928 819 - 0.663004
NA Francci3_2383 301aa long hypothetical 2-phosphoglycerate kinasechromosome CDS2759643 621 + 0.615137
NA Francci3_0508 Phosphoglycerate mutasechromosome CDS593524 648 + 0.71142
NA Francci3_2201 carboxyvinyl-carboxyphosphonate phosphorylmutase, putativechromosome CDS2572959 846 - 0.676123
NA Francci3_2527 NAD-dependent epimerase/dehydratasechromosome CDS2988758 912 + 0.722588
NA Francci3_1639 Triosephosphate isomerasechromosome CDS1971853 927 + 0.705502
NA Francci3_3120 Adenosine kinasechromosome CDS3691655 981 - 0.692151
NA Francci3_1321 conserved hypothetical proteinchromosome CDS1583921 711 + 0.722925
NA Francci3_4004 major facilitator superfamily MFS_1chromosome CDS4787894 1335 + 0.713109
NA Francci3_0465 ABC transporter relatedchromosome CDS543934 1158 + 0.735751
NA Francci3_0717 Drug resistance transporter EmrB/QacA subfamilychromosome CDS822803 1677 + 0.675611
NA Francci3_2752 major facilitator superfamily MFS_1chromosome CDS3242445 1497 + 0.686039
NA Francci3_1037 polysaccharide deacetylasechromosome CDS1232202 810 + 0.741975
NA Francci3_3475 NAD-dependent epimerase/dehydratasechromosome CDS4144294 1044 - 0.720307
NA Francci3_3941 NAD-dependent epimerase/dehydratasechromosome CDS4718124 1029 - 0.66861
NA Francci3_4364 fructose-bisphosphate aldolase, class IIchromosome CDS5211977 1038 + 0.66185
NA Francci3_2326 major intrinsic proteinchromosome CDS2703740 786 - 0.731552
NA Francci3_2350 Phosphoglycerate mutasechromosome CDS2724513 666 - 0.675676
NA Francci3_1584 hypothetical proteinchromosome CDS1900061 1263 + 0.69042
NA Francci3_1582 hypothetical proteinchromosome CDS1897670 390 + 0.702564
NA Francci3_1231 phosphoglucomutase, alpha-D-glucose phosphate-specificchromosome CDS1474756 1701 - 0.72134
NA Francci3_0462 binding-protein-dependent transport systems inner membrane componentchromosome CDS540670 906 + 0.666667
NA Francci3_3681 1,4-alpha-glucan branching enzymechromosome CDS4416474 2439 + 0.703157
NA Francci3_0616 phosphoglucosamine mutasechromosome CDS699047 1368 + 0.72076
NA Francci3_4419 hypothetical proteinchromosome CDS5284654 1602 + 0.724719
NA Francci3_0976 NAD-dependent epimerase/dehydratasechromosome CDS1154594 1044 - 0.713602
NA Francci3_2803 General substrate transporterchromosome CDS3301339 1299 + 0.675135
NA Francci3_1278 Transketolase-likechromosome CDS1527621 1875 + 0.707733
NA Francci3_1638 Phosphoglycerate kinasechromosome CDS1970581 1203 + 0.735661
NA Francci3_2166 Citrate lyasechromosome CDS2537091 1017 + 0.676499
NA Francci3_4238 major facilitator superfamily MFS_1chromosome CDS5056217 1263 - 0.724466
NA Francci3_2413 major facilitator superfamily MFS_1chromosome CDS2801029 1239 - 0.699758
NA Francci3_2255 ABC transporter relatedchromosome CDS2632544 1344 + 0.748512
NA Francci3_0899 PfkBchromosome CDS1040851 933 - 0.705252
NA Francci3_3664 Alpha-glucan phosphorylasechromosome CDS4386371 2559 + 0.7034
NA Francci3_1234 Phosphoglycerate mutasechromosome CDS1477942 699 + 0.722461
NA Francci3_3546 Fructose-6-phosphate phosphoketolasechromosome CDS4238578 2409 - 0.689083
NA Francci3_0722 glycosyl transferase, family 2chromosome CDS830685 1419 - 0.709655
NA Francci3_1667 Glucose-1-phosphate adenylyltransferasechromosome CDS2000815 1239 + 0.698951
NA Francci3_4205 Fructose-bisphosphate aldolasechromosome CDS5021229 837 + 0.702509
NA Francci3_0792 polysaccharide deacetylasechromosome CDS922491 837 + 0.691756
NA Francci3_0203 NAD-dependent epimerase/dehydratasechromosome CDS240985 714 + 0.697479
NA Francci3_1245 hypothetical proteinchromosome CDS1490444 606 - 0.684819
NA Francci3_2254 binding-protein-dependent transport systems inner membrane componentchromosome CDS2631709 828 + 0.702899
NA Francci3_0168 NAD-dependent epimerase/dehydratasechromosome CDS198470 696 + 0.655172
NA Francci3_2035 NAD-dependent epimerase/dehydratasechromosome CDS2396439 1059 + 0.714825
NA Francci3_1772 major facilitator superfamily MFS_1chromosome CDS2107934 1464 - 0.664617
NA Francci3_1797 ribulose-phosphate 3-epimerasechromosome CDS2132099 780 - 0.723077
NA Francci3_0690 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain Ichromosome CDS787849 2043 - 0.721488
NA Francci3_1360 histidine triad (HIT) proteinchromosome CDS1634830 579 + 0.677029
NA Francci3_0723 ABC transporter relatedchromosome CDS832100 1263 - 0.687253
NA Francci3_4079 hypothetical proteinchromosome CDS4886731 147 - 0.680272
NA Francci3_2969 Cupin 2chromosome CDS3514119 516 - 0.718992
NA Francci3_1645 6-phosphogluconolactonasechromosome CDS1978124 798 - 0.739348
NA Francci3_2494 glycoside hydrolase 15-relatedchromosome CDS2941957 1812 - 0.746137
NA Francci3_3456 ABC transporter relatedchromosome CDS4116418 3909 - 0.747762
NA Francci3_4501 NUDIX hydrolasechromosome CDS5372857 969 + 0.723426
NA Francci3_0226 hypothetical proteinchromosome CDS266320 1095 + 0.716895
NA Francci3_2372 hypothetical proteinchromosome CDS2749422 567 + 0.679012
NA Francci3_3680 putative pep2 proteinchromosome CDS4414980 1371 + 0.713348
NA Francci3_3653 ROKchromosome CDS4371952 1125 - 0.734222
NA Francci3_1118 major facilitator superfamily MFS_1chromosome CDS1330564 1416 + 0.628531
NA Francci3_3665 Glycogen debranching enzyme GlgXchromosome CDS4388926 2493 - 0.711592
NA Francci3_1587 polysaccharide deacetylasechromosome CDS1903403 1881 - 0.671451
NA Francci3_3492 Polyphosphate-glucose phosphotransferasechromosome CDS4163389 837 + 0.712067
NA Francci3_2289 major facilitator superfamily MFS_1chromosome CDS2669805 1458 - 0.735254
NA Francci3_3473 polysaccharide biosynthesis protein CapDchromosome CDS4141243 2001 + 0.716142
NA Francci3_3163 HAD-superfamily hydrolase, subfamily IIAchromosome CDS3741845 1350 - 0.728148
NA Francci3_0748 mannose-6-phosphate isomerase, type Ichromosome CDS870202 1302 - 0.740399
NA Francci3_3670 Citrate lyase beta subunit-likechromosome CDS4396367 1254 - 0.700957
NA Francci3_0224 NAD-dependent epimerase/dehydratasechromosome CDS263974 984 + 0.679878
NA Francci3_0936 6-phosphogluconate dehydrogenase related proteinchromosome CDS1099680 1023 - 0.694037
NA Francci3_1303 Methyltransferase FkbMchromosome CDS1558262 1860 - 0.72043
NA Francci3_2545 PfkBchromosome CDS3007583 876 - 0.705479
NA Francci3_0164 Twin-arginine translocation pathway signalchromosome CDS193779 915 + 0.727869
NA Francci3_1580 glycosyl transferase, family 2chromosome CDS1894480 1797 + 0.71675
NA Francci3_2978 polysaccharide deacetylasechromosome CDS3521117 618 - 0.720065
NA Francci3_3889 HAD-superfamily hydrolase, subfamily IIAchromosome CDS4652894 906 - 0.678808
NA Francci3_1583 hypothetical proteinchromosome CDS1898056 1899 + 0.695103
NA Francci3_1350 Glycogen debranching enzyme GlgXchromosome CDS1622543 2331 - 0.672244
NA Francci3_1768 major facilitator superfamily MFS_1chromosome CDS2102801 1314 + 0.669711
NA Francci3_3259 glycoside hydrolase, family 26chromosome CDS3862655 993 + 0.696878
NA Francci3_3843 glycoside hydrolase, family 16chromosome CDS4603463 1041 - 0.620557
NA Francci3_3773 Histidinol-phosphate phosphatase, putative, inositol monophosphatasechromosome CDS4521983 951 + 0.707676
NA Francci3_2804 Citrate lyasechromosome CDS3302819 942 - 0.72293
NA Francci3_2366 hypothetical proteinchromosome CDS2740538 528 + 0.61553
NA Francci3_3102 histidine triad (HIT) proteinchromosome CDS3674701 396 - 0.694444
NA Francci3_4515 dihydroxy-acid dehydratasechromosome CDS5389611 1854 - 0.712514
NA Francci3_2045 major facilitator superfamily MFS_1chromosome CDS2405925 1521 - 0.690993
NA Francci3_2096 hypothetical proteinchromosome CDS2463636 192 + 0.682292
NA Francci3_4442 glycoside hydrolase 15-relatedchromosome CDS5308495 1908 - 0.681342
NA Francci3_3085 Phosphofructokinase, pyrophosphate dependentchromosome CDS3655978 1026 - 0.697856
NA Francci3_2004 Drug resistance transporter EmrB/QacA subfamilychromosome CDS2353276 1521 - 0.729783
NA Francci3_1678 Pyruvate kinasechromosome CDS2013257 1416 + 0.696328
NA Francci3_2394 hypothetical proteinchromosome CDS2772522 927 - 0.742179
NA Francci3_0464 extracellular solute-binding protein, family 1chromosome CDS542550 1359 + 0.711553
NA Francci3_2689 pyruvate phosphate dikinase, PEP/pyruvate-bindingchromosome CDS3174911 2616 + 0.681193
NA Francci3_1349 Malto-oligosyltrehalose synthasechromosome CDS1620058 2496 - 0.717548
NA Francci3_1807 hypothetical proteinchromosome CDS2142642 654 - 0.711009
NA Francci3_3359 Drug resistance transporter EmrB/QacA subfamilychromosome CDS3984685 3339 + 0.707397
NA Francci3_1244 Drug resistance transporter EmrB/QacA subfamilychromosome CDS1488854 1680 + 0.714881
NA Francci3_2871 major facilitator superfamily MFS_1chromosome CDS3383822 1692 - 0.713357
NA Francci3_1997 major facilitator superfamily MFS_1chromosome CDS2346588 1302 + 0.701229
NA Francci3_0751 Phosphomannomutasechromosome CDS872966 1359 + 0.703458
NA Francci3_0253 ROKchromosome CDS291680 1401 - 0.73733
NA Francci3_1791 ROKchromosome CDS2127772 960 - 0.739583
NA Francci3_3451 galactokinasechromosome CDS4110716 1323 - 0.761149
NA Francci3_0479 NAD-dependent epimerase/dehydratasechromosome CDS560805 1065 + 0.68169
NA Francci3_1754 PfkBchromosome CDS2085472 948 - 0.727848
NA Francci3_3844 NAD-dependent epimerase/dehydratasechromosome CDS4604981 858 - 0.634033
NA Francci3_3678 alpha amylase, catalytic regionchromosome CDS4411051 2019 + 0.683011
NA Francci3_1637 glyceraldehyde-3-phosphate dehydrogenase, type Ichromosome CDS1969408 1008 + 0.660714
NA Francci3_1533 phosphoenolpyruvate phosphomutasechromosome CDS1838291 639 - 0.655712
NA Francci3_2837 binding-protein-dependent transport systems inner membrane componentchromosome CDS3341402 990 + 0.680808
NA Francci3_3972 glycoside hydrolase 15-relatedchromosome CDS4752239 1785 + 0.685714
NA Francci3_3188 Ribulose-phosphate 3-epimerasechromosome CDS3777595 711 - 0.729958
NA Francci3_2834 extracellular solute-binding protein, family 1chromosome CDS3338094 1380 + 0.666667
NA Francci3_3876 fructose-1,6-bisphosphatase, class IIchromosome CDS4639051 1056 - 0.69697
NA Francci3_2833 ABC transporter relatedchromosome CDS3336743 1248 + 0.724359
NA Francci3_0045 Glucose-6-phosphate isomerasechromosome CDS56163 1671 + 0.670856
NA Francci3_2014 Drug resistance transporter EmrB/QacA subfamilychromosome CDS2365197 1572 - 0.719466
NA Francci3_4022 glyceraldehyde-3-phosphate dehydrogenase, type Ichromosome CDS4808490 1020 + 0.644118
NA Francci3_2925 HpcH/HpaI aldolasechromosome CDS3445381 933 + 0.743837
NA Francci3_3929 hypothetical proteinchromosome CDS4701620 1743 - 0.721744
NA Francci3_1889 glycoside hydrolase 15-relatedchromosome CDS2221126 1887 - 0.706412
NA Francci3_3486 major facilitator superfamily MFS_1chromosome CDS4155527 1353 + 0.715447
NA Francci3_3232 major facilitator superfamily MFS_1chromosome CDS3826192 1188 + 0.705387
NA Francci3_1836 protein of unknown function DUF574chromosome CDS2171511 804 - 0.708955
NA Francci3_0207 hypothetical proteinchromosome CDS245245 1131 - 0.687003
NA Francci3_4530 putative membrane proteinchromosome CDS5407299 1389 + 0.712023
NA Francci3_3159 NAD(+) kinasechromosome CDS3739030 900 - 0.721111
NA Francci3_3953 hypothetical proteinchromosome CDS4731784 669 - 0.750374
NA Francci3_2253 binding-protein-dependent transport systems inner membrane componentchromosome CDS2630775 948 + 0.707806
NA Francci3_3092 Glucokinase ROKchromosome CDS3663788 1059 - 0.717658
NA Francci3_1690 hypothetical proteinchromosome CDS2026861 390 + 0.7
NA Francci3_4394 HAD-superfamily hydrolase subfamily IIBchromosome CDS5251234 849 + 0.737338
NA Francci3_2805 HpcH/HpaI aldolasechromosome CDS3303757 1068 - 0.681648
NA Francci3_2838 binding-protein-dependent transport systems inner membrane componentchromosome CDS3342457 831 + 0.67148
NA Francci3_2223 putative transmembrane efflux proteinchromosome CDS2597850 381 - 0.716535
NA Francci3_0473 Xylose isomerase-likechromosome CDS553898 927 + 0.696872
NA Francci3_2321 major facilitator superfamily MFS_1chromosome CDS2700553 1230 - 0.77561
NA Francci3_1294 NAD-dependent epimerase/dehydratasechromosome CDS1547788 1083 + 0.694367
NA Francci3_4457 Glycerate kinasechromosome CDS5329181 1128 - 0.762411
NA Francci3_0432 ROKchromosome CDS514542 1038 - 0.746628
NA Francci3_2843 6-phosphofructokinasechromosome CDS3350156 1338 - 0.679372
NA Francci3_0814 NAD-dependent epimerase/dehydratasechromosome CDS946574 1098 - 0.724044