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2024-05-21 12:03:46

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Synechococcus sp. JA-3-3Ab, JA-3-3Ab

Number of genes found: 100

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Synechococcus sp. JA-3-3Ab, JA-3-3Ab
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CYA_0764 putative polysaccharide deacetylaseSubName: Full=Putative polysaccharide deacetylase; chromosome CDS771239 711 - 0.628692
NA CYA_2455 isochorismate synthaseSubName: Full=Isochorismate synthase; EC=5.4.4.2; chromosome CDS2461689 1530 - 0.656209
NA CYA_1417 glycerate kinaseSubName: Full=Glycerate kinase; EC=2.7.1.31; chromosome CDS1426263 1134 + 0.689594
NA CYA_2769 inositol monophosphatase family proteinSubName: Full=Inositol monophosphatase family protein; chromosome CDS2791340 795 + 0.632704
NA CYA_2304 glucose/sorbosone dehydrogenase family proteinSubName: Full=Glucose/sorbosone dehydrogenase family protein; chromosome CDS2305896 1089 - 0.6382
NA CYA_1097 trehalose synthase/putative maltokinaseSubName: Full=Trehalose synthase/putative maltokinase; EC=5.4.99.16; chromosome CDS1118585 3402 - 0.619636
NA CYA_1210 pyruvate kinase barrel domain proteinRecName: Full=Pyruvate kinase; EC=2.7.1.40; chromosome CDS1219396 1464 - 0.636612
NA CYA_0269 glycogen debranching enzyme family proteinSubName: Full=Glycogen debranching enzyme family protein; chromosome CDS275783 2166 - 0.640813
NA CYA_1686 putative cytochromeRecName: Full=Cytochrome c-550-like protein; Flags: Precursor; chromosome CDS1685534 525 - 0.626667
NA CYA_1663 phosphoglycerate mutase family proteinSubName: Full=Phosphoglycerate mutase family protein; chromosome CDS1665244 1365 + 0.622711
NA CYA_2863 fructosamine kinase family proteinSubName: Full=Fructosamine kinase family protein; chromosome CDS2881409 924 - 0.611472
NA CYA_1139 3-beta hydroxysteroid dehydrogenase/isomerase family proteinSubName: Full=3-beta hydroxysteroid dehydrogenase/isomerase family protein; chromosome CDS1163149 660 + 0.572727
NA CYA_1852 TPR repeat proteinSubName: Full=TPR repeat protein; chromosome CDS1855686 1926 + 0.654725
NA CYA_2178 transporter, major facilitator familySubName: Full=Transporter, major facilitator family; chromosome CDS2193986 1287 - 0.607615
NA CYA_1105 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1131148 654 - 0.555046
NA CYA_2121 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2135901 588 + 0.591837
NA CYA_2629 glycosyl hydrolase domain proteinSubName: Full=Glycosyl hydrolase domain protein; chromosome CDS2646700 1773 + 0.658206
NA CYA_2593 transporter, drug:H+ antiporter-1 (12 spanner) (DHA1) familySubName: Full=Transporter, drug:H+ antiporter-1 (12 spanner) (DHA1) family; chromosome CDS2615291 1290 - 0.633333
NA CYA_2141 sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter familySubName: Full=Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family; chromosome CDS2153498 1383 - 0.612437
NA CYA_2752 putative alpha-glucan phosphorylaseSubName: Full=Putative alpha-glucan phosphorylase; chromosome CDS2771629 2157 - 0.609643
NA CYA_2642 transporter, folate-biopterin transporter (FBT) familySubName: Full=Transporter, folate-biopterin transporter (FBT) family; chromosome CDS2656899 1413 - 0.629158
NA CYA_0577 putative UDP-sulfoquinovose synthaseSubName: Full=Putative UDP-sulfoquinovose synthase; chromosome CDS588838 1152 + 0.58941
NA CYA_0097 transporter, major facilitator familySubName: Full=Transporter, major facilitator family; chromosome CDS93643 1557 + 0.639692
NA CYA_0991 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1004332 909 + 0.616062
NA CYA_1872 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1876803 318 + 0.528302
NA CYA_1993 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2012542 273 + 0.564103
NA CYA_1131 transporter, major facilitator familySubName: Full=Transporter, major facilitator family; chromosome CDS1155508 1191 + 0.655751
NA CYA_1817 transporter, major facilitator familySubName: Full=Transporter, major facilitator family; chromosome CDS1822540 1203 - 0.586035
NA CYA_1339 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1352022 1032 + 0.632752
NA CYA_0282 NAD(+)/NADH kinaseRecName: Full=NAD kinase; EC=2.7.1.23; AltName: Full=ATP-dependent NAD kinase; chromosome CDS291655 924 - 0.621212
NA CYA_2675 inositol monophosphatase family proteinSubName: Full=Inositol monophosphatase family protein; chromosome CDS2691230 852 - 0.624413
NA CYA_1573 histidine triad family proteinSubName: Full=Histidine triad family protein; chromosome CDS1583545 342 + 0.605263
NA CYA_2361 NAD-dependent epimerase/dehydratase family proteinSubName: Full=NAD-dependent epimerase/dehydratase family protein; chromosome CDS2368608 957 - 0.62278
NA CYA_0394 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS408911 678 + 0.59292
NA CYA_2501 mannose-6-phosphate isomerase family proteinSubName: Full=Mannose-6-phosphate isomerase family protein; chromosome CDS2512198 402 + 0.587065
NA CYA_0028 putative mannose-6-phosphate isomeraseSubName: Full=Putative mannose-6-phosphate isomerase; chromosome CDS26693 453 + 0.591612
NA CYA_1816 tetratricopeptide repeat proteinSubName: Full=Tetratricopeptide repeat protein; chromosome CDS1820137 2163 + 0.622746
NA CYA_0402 kinase, pfkB familySubName: Full=Kinase, pfkB family; chromosome CDS417443 897 + 0.656633
NA CYA_0441 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS461090 894 - 0.638702
NA CYA_0447 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family proteinSubName: Full=D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein; chromosome CDS465509 2208 + 0.630888
NA CYA_1370 putative sn-glycerol-3-phosphate ABC transporter, permease proteinSubName: Full=Putative sn-glycerol-3-phosphate ABC transporter, permease protein; chromosome CDS1380830 897 + 0.602007
NA CYA_1973 glycosyl hydrolase, family 57SubName: Full=Glycosyl hydrolase, family 57; chromosome CDS1989936 2601 - 0.616686
NA CYA_1969 phosphoglucomutase/phosphomannomutase family proteinSubName: Full=Phosphoglucomutase/phosphomannomutase family protein; chromosome CDS1986510 1632 + 0.66299
NA CYA_0009 phosphoglucomutase/phosphomannomutase family proteinSubName: Full=Phosphoglucomutase/phosphomannomutase family protein; chromosome CDS9806 1404 + 0.619658
NA CYA_0041 putative transporter, bacteriochlorophyll delivery (BCD) familySubName: Full=Putative transporter, bacteriochlorophyll delivery (BCD) family; chromosome CDS37430 1455 + 0.618557
NA CYA_0375 inositol monophosphate family proteinSubName: Full=Inositol monophosphate family protein; chromosome CDS390588 858 + 0.635198
NA CYA_1441 carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding proteinSubName: Full=Carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein; chromosome CDS1447464 1122 - 0.622995
NA CYA_0932 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS941582 633 + 0.527646
NA CYA_2264 NAD(+)/NADH kinaseRecName: Full=NAD kinase; EC=2.7.1.23; AltName: Full=ATP-dependent NAD kinase; chromosome CDS2272522 960 + 0.63125
NA CYA_2306 glycosyl hydrolase, family 31SubName: Full=Glycosyl hydrolase, family 31; chromosome CDS2307197 2436 + 0.652709
NA CYA_1879 NAD-dependent epimerase/dehydratase family proteinRecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; chromosome CDS1884050 954 - 0.626834
NA CYA_1470 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1477378 1236 + 0.631068
NA CYA_1981 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family proteinRecName: Full=Probable phosphoketolase; EC=4.1.2.-; chromosome CDS1999601 2376 + 0.62037
NA CYA_0263 alpha-amylase family proteinRecName: Full=Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Short=GMPMT; EC=2.4.99.16; AltName: Full=(1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase; chromosome CDS268685 1947 - 0.599897
NA CYA_1049 NAD-dependent epimerase/dehydratase family proteinSubName: Full=NAD-dependent epimerase/dehydratase family protein; chromosome CDS1067688 957 + 0.579937
NA CYA_0484 NAD-dependent epimerase/dehydratase family proteinSubName: Full=NAD-dependent epimerase/dehydratase family protein; chromosome CDS501723 948 - 0.646624
NA CYA_1529 polysaccharide deacetylase family proteinSubName: Full=Polysaccharide deacetylase family protein; chromosome CDS1540474 1086 + 0.553407
NA CYA_0864 transporter, major facilitator familySubName: Full=Transporter, major facilitator family; chromosome CDS871611 1251 - 0.613909
NA CYA_0015 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS15513 528 - 0.568182
NA CYA_2805 glycosyl hydrolase, family 57SubName: Full=Glycosyl hydrolase, family 57; chromosome CDS2822552 2208 - 0.624547
NA CYA_1947 carbohydrate kinase, FGGY familySubName: Full=Carbohydrate kinase, FGGY family; chromosome CDS1958780 1422 + 0.651899
cbbL CYA_1194 ribulose bisphosphate carboxylase, large subunitRecName: Full=Ribulose bisphosphate carboxylase large chain; Short=RuBisCO large subunit; EC=4.1.1.39; chromosome CDS1207204 1425 + 0.618246
eda CYA_1625 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolaseSubName: Full=2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; EC=4.1.2.14; EC=4.1.3.16; chromosome CDS1628283 741 - 0.62888
eno CYA_2554 phosphopyruvate hydrataseRecName: Full=Enolase; EC=4.2.1.11; AltName: Full=2-phospho-D-glycerate hydro-lyase; AltName: Full=2-phosphoglycerate dehydratase; chromosome CDS2579118 1299 - 0.627406
fba CYA_1500 fructose-bisphosphate aldolase, class II, Calvin cycle subtypeSubName: Full=Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; EC=4.1.2.13; chromosome CDS1509142 1080 + 0.605556
fbp CYA_1698 fructose-1,6-bisphosphataseRecName: Full=Fructose-1,6-bisphosphatase class 1; Short=FBPase class 1; EC=3.1.3.11; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1; chromosome CDS1701867 999 + 0.616617
gap-1 CYA_0020 glyceraldehyde-3-phosphate dehydrogenase, type ISubName: Full=Glyceraldehyde-3-phosphate dehydrogenase, type I; EC=1.2.1.-; chromosome CDS18689 1032 + 0.625969
gap-2 CYA_0325 glyceraldehyde-3-phosphate dehydrogenase, type ISubName: Full=Glyceraldehyde-3-phosphate dehydrogenase, type I; EC=1.2.1.-; chromosome CDS342373 1020 + 0.59902
gap-3 CYA_2179 glyceraldehyde-3-phosphate dehydrogenase, type ISubName: Full=Glyceraldehyde-3-phosphate dehydrogenase, type I; EC=1.2.1.-; chromosome CDS2195310 1011 - 0.610287
glgA-1 CYA_2071 glycogen/starch synthase, ADP-glucose typeRecName: Full=Glycogen synthase 1; EC=2.4.1.21; AltName: Full=Starch [bacterial glycogen] synthase 1; chromosome CDS2089672 1476 + 0.555556
glgA-2 CYA_2648 glycogen/starch synthase, ADP-glucose typeRecName: Full=Glycogen synthase 2; EC=2.4.1.21; AltName: Full=Starch [bacterial glycogen] synthase 2; chromosome CDS2663700 1455 + 0.598625
glgB CYA_2062 1,4-alpha-glucan branching enzymeRecName: Full=1,4-alpha-glucan branching enzyme GlgB; EC=2.4.1.18; AltName: Full=1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; AltName: Full=Alpha-(1->4)-glucan branching enzyme; AltName: Full=Glycogen branching enzyme; Short=BE; chromosome CDS2081587 2313 - 0.578037
glgC CYA_1562 glucose-1-phosphate adenylyltransferaseRecName: Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27; chromosome CDS1570546 1287 + 0.57265
glgP CYA_2127 alpha-glucan phosphorylaseSubName: Full=Alpha-glucan phosphorylase; EC=2.4.1.1; chromosome CDS2141368 2601 + 0.620531
glk CYA_2134 glucokinaseSubName: Full=Glucokinase; EC=2.7.1.2; chromosome CDS2147594 1047 + 0.638968
glpX CYA_0542 fructose-1,6-bisphosphatase, class IIRecName: Full=D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase; Short=FBPase class 2/SBPase; EC=3.1.3.11; EC=3.1.3.37; chromosome CDS554249 1044 + 0.635057
gnd CYA_0947 6-phosphogluconate dehydrogenase, decarboxylatingRecName: Full=6-phosphogluconate dehydrogenase, decarboxylating; EC=1.1.1.44; chromosome CDS959250 1410 - 0.621986
gpmI CYA_2123 2,3-bisphosphoglycerate-independent phosphoglycerate mutaseRecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Short=BPG-independent PGAM; Short=Phosphoglyceromutase; Short=iPGM; EC=5.4.2.12; chromosome CDS2136813 1593 - 0.631513
ilvD CYA_1697 dihydroxy-acid dehydrataseRecName: Full=Dihydroxy-acid dehydratase; Short=DAD; EC=4.2.1.9; chromosome CDS1699913 1698 - 0.644287
malQ CYA_2436 4-alpha-glucanotransferaseSubName: Full=4-alpha-glucanotransferase; EC=2.4.1.25; chromosome CDS2447528 1602 - 0.632335
opcA CYA_0388 opcA proteinSubName: Full=OpcA protein; chromosome CDS403771 1152 + 0.611111
pgi CYA_0387 glucose-6-phosphate isomeraseRecName: Full=Glucose-6-phosphate isomerase; Short=GPI; EC=5.3.1.9; AltName: Full=Phosphoglucose isomerase; Short=PGI; AltName: Full=Phosphohexose isomerase; Short=PHI; chromosome CDS402053 1599 + 0.631019
pgk CYA_0315 phosphoglycerate kinaseRecName: Full=Phosphoglycerate kinase; EC=2.7.2.3; chromosome CDS323857 1239 - 0.635997
pgl CYA_1259 6-phosphogluconolactonaseSubName: Full=6-phosphogluconolactonase; EC=3.1.1.31; chromosome CDS1275064 732 + 0.642076
ppsA CYA_0741 phosphoenolpyruvate synthaseRecName: Full=Phosphoenolpyruvate synthase; Short=PEP synthase; EC=2.7.9.2; AltName: Full=Pyruvate, water dikinase; chromosome CDS746652 2460 + 0.634146
psaL-1 CYA_0035 photosystem I reaction center subunit XISubName: Full=Photosystem I reaction center subunit XI; chromosome CDS33590 471 + 0.566879
psbX-1 CYA_2558 photosystem II reaction center protein PsbXRecName: Full=Photosystem II reaction center X protein 1; chromosome CDS2581637 117 + 0.581197
psbX-2 CYA_2600 photosystem II reaction center protein PsbXRecName: Full=Photosystem II reaction center X protein 2; chromosome CDS2619212 117 - 0.57265
pyk CYA_2206 pyruvate kinaseRecName: Full=Pyruvate kinase; EC=2.7.1.40; chromosome CDS2221071 1842 + 0.614007
rbsK CYA_2257 ribokinaseSubName: Full=Ribokinase; EC=2.7.1.15; chromosome CDS2266059 930 - 0.647312
rpe CYA_0084 ribulose-phosphate 3-epimeraseRecName: Full=Ribulose-phosphate 3-epimerase; EC=5.1.3.1; chromosome CDS82982 711 - 0.620253
rpiA CYA_2325 ribose 5-phosphate isomerase ARecName: Full=Ribose-5-phosphate isomerase A; EC=5.3.1.6; AltName: Full=Phosphoriboisomerase A; Short=PRI; chromosome CDS2326263 693 + 0.656566
tal CYA_0725 transaldolaseRecName: Full=Transaldolase; EC=2.2.1.2; chromosome CDS730086 1179 - 0.588634
tkt CYA_2346 transketolaseRecName: Full=Transketolase; EC=2.2.1.1; chromosome CDS2352095 2001 - 0.616192
tpiA CYA_0398 triosephosphate isomeraseRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase; chromosome CDS412218 768 + 0.634115
treY CYA_0399 malto-oligosyltrehalose synthaseSubName: Full=Malto-oligosyltrehalose synthase; EC=5.4.99.15; chromosome CDS412991 2802 - 0.518201
treZ CYA_0184 malto-oligosyltrehalose trehalohydrolaseRecName: Full=Malto-oligosyltrehalose trehalohydrolase; Short=MTHase; EC=3.2.1.141; AltName: Full=4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; AltName: Full=Maltooligosyl trehalose trehalohydrolase; chromosome CDS185641 1809 - 0.632394
ugpB CYA_2785 glycerol-3-phosphate ABC transporter, glycerol-3-phosphate binding proteinSubName: Full=Glycerol-3-phosphate ABC transporter, glycerol-3-phosphate binding protein; chromosome CDS2804598 1353 + 0.586105
upgA CYA_2786 glycerol-3-phosphate ABC transporter, permease proteinSubName: Full=Glycerol-3-phosphate ABC transporter, permease protein; chromosome CDS2806202 1053 + 0.579297
zwf CYA_1699 glucose-6-phosphate 1-dehydrogenaseRecName: Full=Glucose-6-phosphate 1-dehydrogenase; Short=G6PD; EC=1.1.1.49; chromosome CDS1702907 1551 + 0.635074