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2024-05-19 16:20:57

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Thiomicrospira denitrificans ATCC 33889, ATCC 33889

Number of genes found: 61

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Thiomicrospira denitrificans ATCC 33889, ATCC 33889
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Tmden_1522 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1595925 294 + 0.357143
NA Tmden_1754 Glyceraldehyde-3-phosphate dehydrogenase, type ISubName: Full=Glyceraldehyde-3-phosphate dehydrogenase; EC=1.2.1.12; chromosome CDS1837718 999 - 0.368368
NA Tmden_1689 Peptidase M42SubName: Full=Peptidase M42; chromosome CDS1768489 1032 + 0.351744
NA Tmden_0794 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS823380 1236 + 0.345469
NA Tmden_0181 Transketolase-likeSubName: Full=Transketolase subunit A; EC=2.2.1.1; chromosome CDS183222 798 - 0.350877
NA Tmden_0573 Phosphoheptose isomeraseRecName: Full=Phosphoheptose isomerase; EC=5.3.1.28; AltName: Full=Sedoheptulose 7-phosphate isomerase; chromosome CDS582220 588 + 0.355442
NA Tmden_1063 Fructose-bisphosphataseRecName: Full=Fructose-1,6-bisphosphatase class 1; Short=FBPase class 1; EC=3.1.3.11; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1; chromosome CDS1126312 843 + 0.361803
NA Tmden_0807 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS842513 486 - 0.255144
NA Tmden_1752 Triosephosphate isomeraseRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase; chromosome CDS1835784 723 - 0.362379
NA Tmden_0841 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS871097 258 - 0.29845
NA Tmden_0184 Sugar isomerase (SIS)SubName: Full=Sugar isomerase (SIS); chromosome CDS186598 555 + 0.331532
NA Tmden_1768 HIT family proteinSubName: Full=HIT family protein; chromosome CDS1850864 369 + 0.317073
NA Tmden_0400 Protein of unknown function DUF6, transmembraneSubName: Full=Uncharacterized protein; chromosome CDS398227 888 + 0.35473
NA Tmden_0751 Polysaccharide deacetylaseSubName: Full=Polysaccharide deacetylase; chromosome CDS777675 2022 + 0.354105
NA Tmden_2001 Phosphopyruvate hydrataseRecName: Full=Enolase; EC=4.2.1.11; AltName: Full=2-phospho-D-glycerate hydro-lyase; AltName: Full=2-phosphoglycerate dehydratase; chromosome CDS2081821 1266 - 0.394155
NA Tmden_0623 PhosphomannomutaseSubName: Full=Phosphomannomutase; EC=5.4.2.8; chromosome CDS636089 1359 + 0.369389
NA Tmden_0065 Dihydroxy-acid dehydrataseRecName: Full=Dihydroxy-acid dehydratase; Short=DAD; EC=4.2.1.9; chromosome CDS69380 1686 + 0.401542
NA Tmden_1954 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2040967 228 + 0.254386
NA Tmden_0894 NAD-dependent epimerase/dehydrataseSubName: Full=NAD-dependent epimerase/dehydratase; chromosome CDS924078 1050 + 0.352381
NA Tmden_1703 NAD-dependent epimerase/dehydrataseSubName: Full=NAD-dependent epimerase/dehydratase; chromosome CDS1783541 879 - 0.32537
NA Tmden_0110 Phosphoglycerate/bisphosphoglycerate mutaseSubName: Full=Phosphoglycerate/bisphosphoglycerate mutase; chromosome CDS117004 537 - 0.353817
NA Tmden_0502 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS505848 477 + 0.331237
NA Tmden_0068 Exo-beta-1 3-glucanase-likeSubName: Full=Exo-beta-1 3-glucanase-like protein; chromosome CDS73591 1917 + 0.333333
NA Tmden_2069 Beta-N-acetylhexosaminidaseSubName: Full=Beta-N-acetylhexosaminidase; EC=3.2.1.52; chromosome CDS2158105 1077 + 0.342618
NA Tmden_1472 Glucose-6-phosphate isomeraseRecName: Full=Glucose-6-phosphate isomerase; Short=GPI; EC=5.3.1.9; AltName: Full=Phosphoglucose isomerase; AltName: Full=Phosphohexose isomerase; chromosome CDS1543996 1209 - 0.320099
NA Tmden_1753 Phosphoglycerate kinaseRecName: Full=Phosphoglycerate kinase; EC=2.7.2.3; chromosome CDS1836510 1200 - 0.389167
NA Tmden_1289 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1360659 591 + 0.340102
NA Tmden_1111 HpcH/HpaI aldolaseSubName: Full=HpcH/HpaI aldolase; chromosome CDS1167287 933 - 0.350482
NA Tmden_1108 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1164692 324 - 0.339506
NA Tmden_0549 6-phosphofructokinaseRecName: Full=ATP-dependent 6-phosphofructokinase; Short=ATP-PFK; Short=Phosphofructokinase; EC=2.7.1.11; AltName: Full=Phosphohexokinase; chromosome CDS552751 960 - 0.363542
NA Tmden_1605 Ribulose-phosphate 3-epimeraseRecName: Full=Ribulose-phosphate 3-epimerase; EC=5.1.3.1; chromosome CDS1685526 642 + 0.369159
NA Tmden_0509 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtypeSubName: Full=Fructose-bisphosphate aldolase; EC=4.1.2.13; chromosome CDS512289 1074 + 0.369646
NA Tmden_0569 putative integral membrane proteinSubName: Full=Putative integral membrane protein; chromosome CDS570981 1194 + 0.277219
NA Tmden_1734 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseSubName: Full=Mannose-1-phosphate guanylyltransferase (GDP); EC=2.7.7.22; chromosome CDS1818986 1368 - 0.379386
NA Tmden_0592 Polysaccharide biosynthesis protein CapDSubName: Full=Polysaccharide biosynthesis protein CapD; chromosome CDS600064 1206 + 0.325041
NA Tmden_0251 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS268646 465 - 0.344086
NA Tmden_2026 TPR repeatSubName: Full=TPR repeat; chromosome CDS2106948 1047 - 0.313276
NA Tmden_1116 Ribose 5-phosphate isomerase BSubName: Full=Ribose-5-phosphate isomerase; EC=5.3.1.6; chromosome CDS1170949 438 + 0.390411
NA Tmden_0070 Major facilitator superfamily MFS_1SubName: Full=Major facilitator superfamily MFS_1; chromosome CDS77263 1317 - 0.367502
NA Tmden_2077 glucose/galactose transporterSubName: Full=Glucose/galactose transporter; chromosome CDS2165699 1281 - 0.388759
NA Tmden_0464 Transaldolase subfamilyRecName: Full=Transaldolase; EC=2.2.1.2; chromosome CDS467241 981 + 0.365953
NA Tmden_0276 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS294404 597 - 0.355109
NA Tmden_1614 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independentRecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Short=BPG-independent PGAM; Short=Phosphoglyceromutase; Short=iPGM; EC=5.4.2.12; chromosome CDS1693328 1476 - 0.384824
NA Tmden_0469 HAD-superfamily hydrolase, subfamily IIASubName: Full=HAD-superfamily hydrolase, subfamily IIA; chromosome CDS471863 777 + 0.342342
NA Tmden_0045 putative MFS metabolite transporterSubName: Full=Putative MFS metabolite transporter; chromosome CDS52872 1182 + 0.320643
NA Tmden_1973 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2056835 696 - 0.362069
NA Tmden_2039 Phosphoglucosamine mutaseRecName: Full=Phosphoglucosamine mutase; EC=5.4.2.10; chromosome CDS2124802 1341 - 0.37211
NA Tmden_0868 Histidine triad (HIT) proteinSubName: Full=Histidine triad (HIT) protein; chromosome CDS895091 399 - 0.345865
NA Tmden_0338 transketolaseRecName: Full=Transketolase; EC=2.2.1.1; chromosome CDS336472 1920 + 0.386979
NA Tmden_0579 ADP-L-glycero-D-manno-heptose-6-epimeraseSubName: Full=ADP-glyceromanno-heptose 6-epimerase; EC=5.1.3.20; chromosome CDS586888 1011 + 0.327399
NA Tmden_1280 Glycosyl transferase, family 2SubName: Full=Glycosyl transferase, family 2; chromosome CDS1349827 2670 - 0.344569
NA Tmden_1203 Histidine triad (HIT) proteinSubName: Full=Histidine triad (HIT) protein; chromosome CDS1269409 495 - 0.381818
NA Tmden_2076 Aldose 1-epimeraseSubName: Full=Aldose 1-epimerase; chromosome CDS2164876 837 - 0.357228
NA Tmden_1732 ABC-2SubName: Full=ABC-2; chromosome CDS1816949 792 - 0.352273
NA Tmden_1731 ABC transporter-related proteinSubName: Full=ABC transporter-related protein; chromosome CDS1815720 1233 - 0.403893
NA Tmden_1477 Carbohydrate kinase, FGGYSubName: Full=Carbohydrate kinase, FGGY; chromosome CDS1550508 1563 - 0.413308
NA Tmden_1085 NAD(+) kinaseRecName: Full=NAD kinase; EC=2.7.1.23; AltName: Full=ATP-dependent NAD kinase; chromosome CDS1145476 855 - 0.356725
NA Tmden_1950 Protein of unknown function DUF6, transmembraneSubName: Full=Uncharacterized protein; chromosome CDS2033479 891 - 0.409652
NA Tmden_1663 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1745444 1728 + 0.325231
NA Tmden_1371 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1441627 1209 - 0.331679
NA Tmden_0180 Transketolase, central regionSubName: Full=Transketolase, central region; chromosome CDS182741 489 - 0.335378