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2024-05-03 08:09:30

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Streptococcus pneumoniae R6, R6

Number of genes found: 194

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Streptococcus pneumoniae R6, R6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
ABC-MSP ABC transporter membrane spanning permease-sugar transportchromosome CDS88750 924 + 0.422078
ABC-MSP ABC transporter membrane-spanning permease-sugar transportchromosome CDS1510325 834 - 0.359712
ABC-MSP ABC transporter membrane-spanning permease-sugar transporterchromosome CDS1592997 909 - 0.333333
ABC-MSP ABC transporter membrane-spanning permease-sugar transportchromosome CDS1511158 885 - 0.370621
ABC-MSP ABC transporter membrane-spanning permease-sugar transportchromosome CDS1592150 855 - 0.34152
ABC-MSP ABC transporter membrane-spanning permease-sugar transportchromosome CDS1502114 897 - 0.397993
ABC-MSP ABC transporter membrane-spanning permease-sugar transportchromosome CDS87777 960 + 0.408333
ABC-MSP ABC transporter membrane-spanning permease-sugar transportchromosome CDS1501259 840 - 0.42381
ABC-MSP ABC transporter membrane-spanning permease-macrolide effluxchromosome CDS1002215 1179 + 0.373198
ABC-SBP ABC transporter substrate-binding protein-sugar transportchromosome CDS1503232 1329 - 0.403311
ABC-SBP ABC transporter solute binding protein-sugar transportchromosome CDS89862 1545 + 0.376052
ABC-SBP ABC transporter substrate-binding protein-sugar transportchromosome CDS1512121 1338 - 0.360239
ABC-SBP ABC transporter substrate-binding protein-sugar transportchromosome CDS1593995 1314 - 0.356164
MFS transporter Major facilitator superfamily transporter-efflux?chromosome CDS1435804 1152 - 0.430556
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS295053 780 + 0.416667
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS294547 492 + 0.408537
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS1504685 1533 - 0.368558
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS423672 1680 + 0.355952
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS1823913 282 - 0.379433
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS278777 315 + 0.342857
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS569431 522 + 0.354406
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS69847 405 + 0.439506
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS1960527 471 - 0.320594
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS570343 1476 + 0.413279
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS1960988 447 - 0.328859
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS421837 345 + 0.362319
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS276329 342 + 0.350877
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS1823351 486 - 0.399177
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS501729 1839 + 0.34149
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS418456 1326 + 0.393665
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS292900 435 + 0.390805
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS1959729 774 - 0.373385
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS295819 819 + 0.39072
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS279696 1347 + 0.379362
PTS-EII Phosphotransferase system sugar-specific EII componentchromosome CDS1958932 801 - 0.347066
PTS-EIIA Phosphotransferase system sugar-specific EIIA componentchromosome CDS220443 321 + 0.323988
PTS-EIIB Phosphotransferase system sugar-specific EIIB componentchromosome CDS67629 477 + 0.410901
PTS-EIIB Phosphotransferase system sugar-specific EIIB componentchromosome CDS220809 309 + 0.368932
PTS-EIIC Phosphotransferase system sugar-specific EIIC componentchromosome CDS68133 906 + 0.443709
PTS-EIIC Phosphotransferase system sugar-specific EIIC componentchromosome CDS221110 1323 + 0.359033
PTS-EIID Phosphotransferase system sugar-specific EIID componentchromosome CDS69010 831 + 0.404332
aga Alpha-galactosidase (melibiase)chromosome CDS1685869 2163 - 0.372631
amy Alpha-amylase precursorchromosome CDS1237343 1455 + 0.457732
aqpZ Aquaporin Z-water channel proteinchromosome CDS1579849 669 - 0.45142
araD L-ribulose 5-phosphate 4-epimerasechromosome CDS1821096 705 - 0.428369
bgaC Beta-galactosidase 3chromosome CDS65845 1788 + 0.419463
bgl-truncation Phospho-beta-gluco or galactosidase, truncationchromosome CDS653116 297 + 0.444444
bgl2 Beta-glucosidasechromosome CDS1807407 1452 + 0.383609
bglA 6-phospho-beta-glucosidasechromosome CDS238727 1380 + 0.42971
bglA 6-phospho-beta-glucosidasechromosome CDS274499 1437 + 0.356298
bglB-truncation Phospho-beta-glucosidase, truncationchromosome CDS273803 93 + 0.258065
bglG Transcription antiterminator BglG familychromosome CDS276788 1980 + 0.313636
bglH 6-phospho-beta-glucosidasechromosome CDS503580 1416 + 0.335452
capD CapD protein, required for the biosynthesis of type 1 capsular polysaccharidechromosome CDS99217 1851 + 0.421934
deoB phosphodeoxyribomutasechromosome CDS731211 1275 + 0.421961
deoR DEOR-type transcriptional regulatorchromosome CDS218461 795 + 0.313208
dexB Alpha, 1-6-glucosidasechromosome CDS310667 1608 + 0.424751
dexS Dextran glucosidasechromosome CDS1666290 1626 - 0.414514
eno Enolasechromosome CDS1018322 1305 + 0.431418
fba Fructose-bisphosphate aldolasechromosome CDS529452 882 + 0.438776
fcsK Fucose kinasechromosome CDS1962617 1449 - 0.356798
fcsR Regulator of fucose operonchromosome CDS1964196 774 + 0.339793
fruA Fructose specific-phosphotransferase system IIBC componentchromosome CDS776031 1953 + 0.445469
fruB Fructose-1-phosphate kinasechromosome CDS775123 912 + 0.410088
fruR Transcriptional repressor of the fructose operonchromosome CDS774386 741 + 0.4278
fucA L-fuculose phosphate aldolasechromosome CDS1961864 654 - 0.37156
fucI L-fucose isomerasechromosome CDS1951630 1767 - 0.422184
fucU Fucose pathway protein, function unknownchromosome CDS1961412 441 - 0.326531
galK Galactokinasechromosome CDS1640591 1179 - 0.440204
galM Aldose-1-epimerase (mutarotase)chromosome CDS71831 1038 + 0.454721
galT Galactose-1-phosphate uridylyltransferasechromosome CDS1639091 1482 - 0.452092
galT Galactose-1-phosphate uridylyltransferasechromosome CDS1620044 1476 - 0.339431
gapA Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating)chromosome CDS1799954 1080 - 0.413889
glcK Glucose kinasechromosome CDS600133 978 + 0.440695
glgA Glycogen synthasechromosome CDS1014454 1434 + 0.407252
glgB 1,4-alpha-glucan branching enzymechromosome CDS1010268 1929 + 0.406947
glgC Glucose-1-phosphate adenylyltransferasechromosome CDS1012186 1143 + 0.409449
glgD Required for glycogen biosynthesischromosome CDS1013318 1140 + 0.383333
glk Glucokinasechromosome CDS1497340 885 - 0.433898
glmM Phosphoglucosamine mutasechromosome CDS1403479 1353 - 0.443459
glpF Glycerol uptake facilitator proteinchromosome CDS1979572 705 - 0.460993
glpF Glycerol uptake facilitator protein paralogchromosome CDS1329082 870 - 0.442529
glxK Glycerate kinasechromosome CDS1016588 1128 + 0.411348
gnd 6-phosphogluconate dehydrogenasechromosome CDS339733 1425 + 0.430175
gpi Glucose-6-phosphate isomerasechromosome CDS1859131 1350 - 0.415556
gpmA Phosphoglyceromutasechromosome CDS1478450 693 - 0.419913
gpmB Phosphoglycerate mutase 2 paralogchromosome CDS212409 750 + 0.448
gpmB Phosphoglycerate mutasechromosome CDS877383 621 - 0.42351
gtfA Dextransucrase (sucrose 6-glucosyltransferase)chromosome CDS1680991 1443 - 0.38115
ilvD Dihydroxyacid dehydratasechromosome CDS1916000 1704 - 0.4777
kdgA 2-keto-3-deoxy-6-phosphogluconate aldolasechromosome CDS289483 630 - 0.450794
kdgK 2-keto-3-deoxygluconate kinasechromosome CDS290122 1002 - 0.427146
lacA Galactose-6-phosphate isomerase LacA subunitchromosome CDS1074234 426 - 0.413146
lacB Galactose-6-phosphate isomerase LacB subunitchromosome CDS1073688 516 - 0.395349
lacC Tagatose-6-phosphate kinasechromosome CDS1072748 930 - 0.407527
lacD Tagatose 1,6-diphosphate aldolasechromosome CDS1071766 981 - 0.412844
lacE PTS system, lactose-specific IIBC componentchromosome CDS1068652 1692 - 0.405437
lacF PTS system, lactose-specific IIA componentchromosome CDS1070343 318 - 0.430818
lacG Phospho-beta-D-galactosidasechromosome CDS422191 1413 + 0.350318
lacG Phospho-beta-D-galactosidasechromosome CDS1067037 1407 - 0.393746
lacR Lactose phosphotransferase system repressorchromosome CDS1065778 762 + 0.347769
lacX-truncation Function unknown, truncationchromosome CDS1074817 345 - 0.371015
licB Homologous to LicB, which regulates expression of LPS epitopes in H. influenzaechromosome CDS1147539 891 - 0.399551
malC ABC transporter membrane-spanning permease-maltose/maltodextrinchromosome CDS1901454 1308 + 0.412844
malD ABC transporter membrane-spanning permease-maltose/maltodextrinchromosome CDS1902742 864 + 0.429398
malM 4-alpha-glucanotransferase (amylomaltase)chromosome CDS1898020 1518 - 0.434124
malP Maltodextrin phosphorylasechromosome CDS1895736 2259 - 0.412129
malX ABC transporter substrate-binding protein-maltose/maltodextrinchromosome CDS1900087 1272 + 0.408019
manL Phosphotransferase system, mannose-specific EIIABchromosome CDS262185 999 - 0.424424
manM Phosphotransferase system, mannose-specific EIICchromosome CDS261354 804 - 0.476368
manN Phosphotransferase system, mannose-specific EIIDchromosome CDS260419 912 - 0.411184
mefE ABC transporter membrane-spanning permease-macrolide effluxchromosome CDS953383 1212 + 0.305281
msmE ABC transporter substrate-binding protein-multiple sugarschromosome CDS1684518 1260 - 0.431746
msmF ABC transporter membrane-spanning permease-multiple sugarschromosome CDS1683638 891 - 0.419753
msmG ABC transporter membrane spanning permease-multiple sugarschromosome CDS1682791 834 - 0.425659
msmK ABC transporter ATP-binding protein-multiple sugar transportchromosome CDS1420581 1131 - 0.410256
mtlA Mannitol PTS EIIchromosome CDS353760 1770 + 0.40791
mtlD Mannitol-1-phosphate 5-dehydrogenasechromosome CDS358009 1137 + 0.368514
mtlF Mannitol-specific enzyme IIA componentchromosome CDS357510 438 + 0.360731
nagA N-acetylglucosamine-6-phosphate deacetylasechromosome CDS1837312 1152 - 0.445312
nagB N-acetylglucosamine-6-phosphate isomerasechromosome CDS1266335 723 - 0.417704
nagD N-acetyl-glucosamine matabolismchromosome CDS1260644 774 - 0.458656
nanA Sialidase A precursor (neuraminidase A)chromosome CDS1514944 3108 - 0.426319
nanB Sialidase B precursor (neuraminidase B)chromosome CDS1508214 2094 - 0.333811
nanE N-acetylmannosamine-6-P epimerasechromosome CDS1506221 699 - 0.433476
nanE N-acetylmannosamine-6-P epimerasechromosome CDS1193495 699 - 0.430615
nplT Neopullulanasechromosome CDS931945 1764 + 0.39229
oxlT Major facilitator:Oxalate:Formate Antiporterchromosome CDS1425561 1227 - 0.405868
pepA Glutamyl aminopeptidasechromosome CDS1653449 1065 - 0.460094
pfkA 6-phosphofructokinase Ichromosome CDS799177 1008 + 0.443452
pgdA Peptidoglycan GlcNAc deacetylasechromosome CDS1319730 1392 - 0.390086
pgk Phosphoglycerate kinasechromosome CDS446182 1197 + 0.434419
pgm Phosphoglucomutasechromosome CDS1333648 1719 + 0.43281
pmi Mannose-6-phosphate isomerasechromosome CDS653533 945 + 0.430688
pmrA Major facilitator superfamily multi-drug resistance efflux pumpchromosome CDS866211 1200 + 0.431667
ptcA Phosphotransferase system system, cellobiose-specific IIA componentchromosome CDS1810463 327 + 0.360856
ptcB Phosphotransferase system system, cellobiose-specific IIB componentchromosome CDS1810176 309 + 0.365696
ptcC Phosphotransferase system system, cellobiose-specific IIC componentchromosome CDS1808876 1296 + 0.348765
ptsG PTS glucose-specific enzyme IIABC componentchromosome CDS671374 2181 + 0.413113
ptsH Histidine-containing phosphocarrier protein of the PTSchromosome CDS1061374 264 - 0.416667
ptsI PTS enzyme Ichromosome CDS1059635 1734 - 0.435409
pulA Alkaline amylopullulanasechromosome CDS243374 3771 - 0.431185
pulI Thermostable pullulanasechromosome CDS1005556 2280 + 0.410088
pykF Pyruvate kinase I; fructose-stimulatedchromosome CDS800243 1506 + 0.411687
rpe Pentose-5-phosphate-3-epimerasechromosome CDS1768737 657 - 0.449011
rpiA Ribose-5-phosphate epimerasechromosome CDS730520 741 + 0.430499
sacA Sucrose-6-phosphate hydrolasechromosome CDS1590821 1320 - 0.4
scrA Phosphotransferase system enzyme IIchromosome CDS1546504 1884 - 0.440552
scrB Sucrose-6-phosphate hydrolasechromosome CDS1548764 1455 + 0.426804
scrK Fructokinasechromosome CDS1545468 888 - 0.442568
sga Hexulose-6-phosphate isomerasechromosome CDS1821802 864 - 0.40162
sgh Hexulose-6-phosphate synthase (HumpS)chromosome CDS1822669 735 - 0.42585
spr0024 Conserved hypothetical proteinchromosome CDS25158 579 + 0.423143
spr0144 Conserved hypothetical proteinchromosome CDS152331 1230 + 0.374797
spr0155 Hypothetical proteinchromosome CDS163827 582 + 0.38488
spr0158 Hypothetical proteinchromosome CDS166821 459 - 0.461874
spr0289 Hypothetical proteinchromosome CDS291154 642 - 0.411215
spr0328 Conserved hypothetical proteinchromosome CDS327393 5304 + 0.427036
spr0458 Conserved hypothetical proteinchromosome CDS466391 411 - 0.430657
spr0552 Conserved hypothetical proteinchromosome CDS552212 1038 + 0.453757
spr0553 Hypothetical proteinchromosome CDS553218 504 + 0.420635
spr0563 Hypothetical proteinchromosome CDS569990 306 + 0.401961
spr0704 Hypothetical proteinchromosome CDS703224 876 + 0.356164
spr0730 Conserved hypothetical proteinchromosome CDS729423 873 + 0.438717
spr0963 Hypothetical proteinchromosome CDS943808 783 + 0.282248
spr1005 Conserved hypothetical proteinchromosome CDS987696 831 + 0.415162
spr1080 Hypothetical proteinchromosome CDS1076140 303 - 0.405941
spr1081 Hypothetical proteinchromosome CDS1076480 273 - 0.362637
spr1185 Hypothetical proteinchromosome CDS1183138 204 - 0.421569
spr1222 Hypothetical proteinchromosome CDS1219095 1434 - 0.362622
spr1260 Conserved hypothetical proteinchromosome CDS1258385 849 - 0.43934
spr1302 Conserved hypothetical proteinchromosome CDS1295051 957 - 0.426332
spr1358 Conserved hypothetical proteinchromosome CDS1340907 1014 + 0.427022
spr1454 Hypothetical proteinchromosome CDS1437195 630 - 0.38254
spr1524 Conserved hypothetical proteinchromosome CDS1500534 453 - 0.379691
spr1535 Hypothetical proteinchromosome CDS1513477 453 - 0.350993
spr1908 Conserved hypothetical proteinchromosome CDS1885060 1134 - 0.409171
spr1932 Conserved hypothetical proteinchromosome CDS1913038 1248 - 0.383814
spr1939 Hypothetical proteinchromosome CDS1921085 285 - 0.333333
spr1940 Conserved hypothetical proteinchromosome CDS1921373 2031 - 0.329394
spr1950 Conserved hypothetical proteinchromosome CDS1931774 882 - 0.46712
spr1951 Conserved hypothetical proteinchromosome CDS1932727 2661 - 0.448328
spr1953 Conserved hypothetical proteinchromosome CDS1936914 2085 + 0.468106
spr1954 Hypothetical proteinchromosome CDS1939038 1752 - 0.464612
spr1983 Conserved hypothetical proteinchromosome CDS1974482 1179 - 0.336726
talC Transaldolase Cchromosome CDS225040 669 + 0.367713
tktA Transketolasechromosome CDS1815951 1977 - 0.443096
tktC Putative transketolase c-terminal sectionchromosome CDS1917936 933 - 0.355841
tktN Putative transketolase n-terminal sectionchromosome CDS1918865 858 - 0.348485
tpi Triose phosphate isomerasechromosome CDS1416054 780 - 0.424359
treP Phosphotransferase system, trehalose-specific IIBC componentchromosome CDS1668093 2118 - 0.4339
xylR Xylose repressor proteinchromosome CDS417068 1224 - 0.338235
xylS Alpha-xylosidasechromosome CDS282002 2214 + 0.358175
zwf Glucose-6-phosphate 1-dehydrogenasechromosome CDS1122712 1488 + 0.415995