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2024-05-04 11:34:17

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Dechloromonas aromatica RCB, RCB

Number of genes found: 139

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Dechloromonas aromatica RCB, RCB
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Daro_2881 periplasmic sugar-binding protein, putativechromosome CDS3100673 1104 - 0.588768
NA Daro_2419 Acyltransferase 3chromosome CDS2612198 1029 + 0.505345
NA Daro_3577 TRAP dicarboxylate transporter-DctP subunitchromosome CDS3831237 1008 - 0.618056
NA Daro_1283 TPR repeatchromosome CDS1393343 1173 + 0.566922
NA Daro_1257 NAD-dependent epimerase/dehydratase:Polysaccharide biosynthesis protein CapDchromosome CDS1364952 1098 + 0.622951
NA Daro_1259 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerasechromosome CDS1366510 933 + 0.605573
NA Daro_0004 Histidine triad (HIT) proteinchromosome CDS5514 450 + 0.6
NA Daro_3591 transketolasechromosome CDS3846820 2007 + 0.648729
NA Daro_2406 conserved hypothetical proteinchromosome CDS2594358 1518 + 0.550066
NA Daro_0580 Glycogen/starch synthases, ADP-glucose typechromosome CDS647278 1458 - 0.651578
NA Daro_2364 Enolasechromosome CDS2547899 1284 - 0.573209
NA Daro_3930 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesischromosome CDS4225534 1008 + 0.595238
NA Daro_3595 Pyruvate kinasechromosome CDS3852296 1434 + 0.632497
NA Daro_2075 Cupin regionchromosome CDS2233835 408 - 0.539216
NA Daro_2046 Putative carbohydrate binding:Glycosyltransferase 36:Glycosyltransferase 36 associatedchromosome CDS2199141 8799 - 0.638595
NA Daro_4134 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase:NmrA-likechromosome CDS4434299 963 + 0.620976
NA Daro_3391 TRAP dicarboxylate transporter-DctP subunitchromosome CDS3643970 1020 - 0.598039
NA Daro_1706 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductasechromosome CDS1832645 930 - 0.492473
NA Daro_4064 Protein of unknown function DUF6, transmembranechromosome CDS4361151 852 - 0.618545
NA Daro_0128 Major facilitator superfamily MFS_1chromosome CDS141296 1269 - 0.609141
NA Daro_1984 Major facilitator superfamily MFS_1chromosome CDS2132832 1266 - 0.586098
NA Daro_1083 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2chromosome CDS1187330 567 - 0.564374
NA Daro_0581 Phosphoglucose isomerase (PGI)chromosome CDS648738 1581 - 0.639469
NA Daro_1286 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS1396799 999 + 0.554555
NA Daro_1904 Cupin regionchromosome CDS2047175 363 - 0.603306
NA Daro_2071 6-phosphogluconolactonasechromosome CDS2229840 699 + 0.619456
NA Daro_2993 TRAP dicarboxylate transporter-DctP subunitchromosome CDS3230595 1005 - 0.538308
NA Daro_2413 Glycosyl transferase, family 2:Polysaccharide deacetylasechromosome CDS2603975 2019 + 0.566617
NA Daro_1096 Major facilitator superfamily MFS_1chromosome CDS1198750 1200 - 0.685833
NA Daro_3057 Protein of unknown function DUF6, transmembranechromosome CDS3300371 852 - 0.605634
NA Daro_3317 Xylose isomerase-like TIM barrelchromosome CDS3567484 774 - 0.607235
NA Daro_3389 TRAP dicarboxylate transporter, DctM subunitchromosome CDS3642197 1281 - 0.590945
NA Daro_0827 General substrate transporter:Major facilitator superfamily MFS_1chromosome CDS898879 1221 + 0.629812
NA Daro_0280 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerasechromosome CDS324289 891 + 0.639731
NA Daro_2034 Glycoside hydrolase, family 3, N-terminalchromosome CDS2184790 1020 + 0.565686
NA Daro_1077 General substrate transporter:Major facilitator superfamily MFS_1chromosome CDS1179975 1212 - 0.624587
NA Daro_2062 Transaldolase subfamilychromosome CDS2218993 1101 - 0.614896
NA Daro_3596 Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase, class II, Calvin cycle subtypechromosome CDS3853780 1065 + 0.62723
NA Daro_2069 6-phosphogluconate dehydrogenase, decarboxylatingchromosome CDS2226941 1440 + 0.654861
NA Daro_3637 Ribulose bisphosphate carboxylase, large chainchromosome CDS3909856 1380 + 0.624638
NA Daro_1677 Protein of unknown function DUF894, DitE:Major facilitator superfamily MFS_1chromosome CDS1805629 1308 + 0.605505
NA Daro_0584 Glycoside hydrolase, family 57chromosome CDS654865 1656 - 0.632246
NA Daro_2118 MOFRLchromosome CDS2288484 1281 - 0.631538
NA Daro_3589 Inositol phosphatase/fructose-1,6-bisphosphatasechromosome CDS3844988 1017 + 0.627335
NA Daro_0494 Major facilitator superfamily MFS_1chromosome CDS556734 1224 + 0.676471
NA Daro_3581 Major facilitator superfamily MFS_1chromosome CDS3836145 1218 + 0.625616
NA Daro_1069 Major facilitator superfamily MFS_1chromosome CDS1171209 1209 - 0.650124
NA Daro_0233 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independentchromosome CDS262276 1641 + 0.631932
NA Daro_3390 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS3643477 486 - 0.559671
NA Daro_4075 Protein of unknown function DUF6, transmembranechromosome CDS4370365 885 - 0.657627
NA Daro_2818 Protein of unknown function DUF894, DitE:Major facilitator superfamily MFS_1chromosome CDS3025578 1215 - 0.6
NA Daro_0136 hypothetical proteinchromosome CDS150828 336 - 0.639881
NA Daro_2684 hypothetical proteinchromosome CDS2880383 666 + 0.481982
NA Daro_0156 Polysaccharide deacetylasechromosome CDS170917 831 + 0.643803
NA Daro_1098 Protein of unknown function DUF6, transmembranechromosome CDS1200966 918 - 0.690632
NA Daro_3628 Inositol phosphatase/fructose-1,6-bisphosphatasechromosome CDS3902376 1074 - 0.638734
NA Daro_2828 Protein of unknown function DUF6, transmembranechromosome CDS3037636 885 + 0.613559
NA Daro_2868 malyl-CoA lyase or citrate lyase, beta subunitchromosome CDS3087847 984 + 0.58435
NA Daro_4120 Histidine triad (HIT) proteinchromosome CDS4417307 432 - 0.587963
NA Daro_2733 Aldose 1-epimerasechromosome CDS2928052 846 - 0.609929
NA Daro_1529 General substrate transporter:Major facilitator superfamily MFS_1chromosome CDS1637545 1431 + 0.637317
NA Daro_3345 Major facilitator superfamily MFS_1chromosome CDS3601586 1254 - 0.625997
NA Daro_3593 Glyceraldehyde 3-phosphate dehydrogenasechromosome CDS3849935 1050 + 0.626667
NA Daro_0946 Phosphoglucosamine mutasechromosome CDS1026685 1353 + 0.571323
NA Daro_0582 Alpha-glucan phosphorylasechromosome CDS650315 2571 - 0.634772
NA Daro_0456 conserved hypothetical transmembrane proteinchromosome CDS499097 1398 + 0.60515
NA Daro_3949 conserved hypothetical proteinchromosome CDS4245814 1068 + 0.643258
NA Daro_3376 Histidine triad (HIT) proteinchromosome CDS3633482 351 - 0.584046
NA Daro_2117 Pyruvate kinasechromosome CDS2287039 1419 - 0.574348
NA Daro_1444 Phosphoglucomutase, alpha-D-glucose phosphate-specificchromosome CDS1570887 1638 + 0.651404
NA Daro_2992 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS3229752 783 - 0.559387
NA Daro_2991 TRAP dicarboxylate transporter, DctM subunitchromosome CDS3228472 1284 - 0.563084
NA Daro_0557 Glycosyl hydrolase, BNR repeatchromosome CDS617654 1128 - 0.684397
NA Daro_3624 Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase, class II, Calvin cycle subtypechromosome CDS3897003 1038 - 0.636802
NA Daro_0860 Nucleoside:H+ symporter:Major facilitator superfamily MFS_1chromosome CDS931501 1188 + 0.577441
NA Daro_2766 Protein of unknown function DUF6, transmembranechromosome CDS2966719 870 - 0.632184
NA Daro_3483 Ribulose-phosphate 3-epimerasechromosome CDS3731785 702 - 0.588319
NA Daro_1255 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerasechromosome CDS1363165 978 + 0.599182
NA Daro_4161 HAD-superfamily subfamily IIA hydrolase, hypothetical 2:HAD-superfamily hydrolase, subfamily IIAchromosome CDS4460333 768 - 0.635417
NA Daro_0592 Glucokinasechromosome CDS662508 930 - 0.64086
NA Daro_2403 Polysaccharide deacetylasechromosome CDS2591263 840 + 0.509524
NA Daro_1023 Pyrrolo-quinoline quinonechromosome CDS1122926 1782 - 0.640292
NA Daro_3592 Glyceraldehyde-3-phosphate dehydrogenase, type Ichromosome CDS3848848 1029 + 0.618076
NA Daro_3626 transketolasechromosome CDS3899298 2073 - 0.664255
NA Daro_4022 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS4321327 552 - 0.612319
NA Daro_2872 hypothetical proteinchromosome CDS3090591 1197 - 0.526316
NA Daro_0302 Dihydroxy-acid dehydratasechromosome CDS344356 1857 + 0.616047
NA Daro_1264 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesischromosome CDS1371649 1011 + 0.581602
NA Daro_4082 PTS system fructose subfamily IIA componentchromosome CDS4376435 390 + 0.576923
NA Daro_0585 Glucose-1-phosphate adenylyltransferasechromosome CDS656520 1323 - 0.611489
NA Daro_1135 Major facilitator superfamily MFS_1chromosome CDS1240964 1167 + 0.651242
NA Daro_4147 PTS IIA-like nitrogen-regulatory protein PtsNchromosome CDS4447168 447 - 0.557047
NA Daro_0037 ROKchromosome CDS43448 894 - 0.62528
NA Daro_0035 Major facilitator superfamily MFS_1chromosome CDS41511 1218 - 0.623974
NA Daro_1598 hypothetical proteinchromosome CDS1712466 399 - 0.503759
NA Daro_1885 Major facilitator superfamily MFS_1chromosome CDS2025249 1209 - 0.640199
NA Daro_3576 TRAP C4-dicarboxylate transport system permease DctM subunitchromosome CDS3829398 1836 - 0.653595
NA Daro_2664 hypothetical proteinchromosome CDS2858449 2775 + 0.586667
NA Daro_4179 Polysaccharide deacetylasechromosome CDS4476929 801 + 0.686642
NA Daro_0839 Major facilitator superfamily MFS_1chromosome CDS912720 1209 + 0.621175
NA Daro_3594 Phosphoglycerate kinasechromosome CDS3851023 1182 + 0.624366
NA Daro_3204 Phosphofructokinasechromosome CDS3456212 1260 - 0.607143
NA Daro_2070 Glucose-6-phosphate dehydrogenasechromosome CDS2228377 1464 + 0.612022
NA Daro_3804 HpcH/HpaI aldolasechromosome CDS4086420 801 + 0.660424
NA Daro_0501 Phosphoheptose isomerasechromosome CDS562530 591 - 0.610829
NA Daro_0569 hypothetical proteinchromosome CDS636309 297 + 0.56229
NA Daro_0583 Glycoside hydrolase, family 57chromosome CDS652882 1974 - 0.619554
NA Daro_3935 PfkBchromosome CDS4230778 933 - 0.594855
NA Daro_3299 Phosphoglucomutase/phosphomannomutase C terminal:Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I:Phosphoglucomutase/phosphomannomutasechromosome CDS3547851 1377 + 0.611474
NA Daro_2389 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerasechromosome CDS2574632 1440 - 0.551389
NA Daro_0097 Protein of unknown function DUF6, transmembranechromosome CDS113592 915 - 0.64918
NA Daro_2063 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolasechromosome CDS2220090 2367 - 0.619772
NA Daro_2119 General substrate transporter:Major facilitator superfamily MFS_1chromosome CDS2289843 1332 - 0.60961
NA Daro_4023 TRAP dicarboxylate transporter-DctP subunitchromosome CDS4321875 1026 - 0.625731
NA Daro_4021 TRAP dicarboxylate transporter, DctM subunitchromosome CDS4319973 1353 - 0.617886
NA Daro_0049 Drug resistance transporter Bcr/CflA subfamilychromosome CDS58511 1203 - 0.641729
NA Daro_0586 1,4-alpha-glucan branching enzymechromosome CDS657897 1866 + 0.620043
NA Daro_1015 Major facilitator superfamily MFS_1chromosome CDS1109150 1572 - 0.606234
NA Daro_0602 Phosphoglycerate/bisphosphoglycerate mutasechromosome CDS672506 657 + 0.619483
NA Daro_0151 Phosphoglycerate/bisphosphoglycerate mutasechromosome CDS165225 558 + 0.637993
NA Daro_0482 Major facilitator superfamily MFS_1chromosome CDS544619 1224 + 0.629902
NA Daro_1681 Inositol monophosphatasechromosome CDS1809296 807 - 0.607187
NA Daro_1768 Phosphoenolpyruvate synthasechromosome CDS1901724 2376 + 0.606902
NA Daro_1707 hypothetical proteinchromosome CDS1833571 2100 - 0.435238
NA Daro_4083 Phosphoryl transfer system, HPrchromosome CDS4376829 270 + 0.603704
NA Daro_4084 Phosphoenolpyruvate-protein phosphotransferasechromosome CDS4377105 1743 + 0.618474
NA Daro_0947 Triosephosphate isomerasechromosome CDS1028125 750 + 0.544
NA Daro_3336 Class II aldolase/adducin, N-terminalchromosome CDS3590618 630 + 0.669841
NA Daro_1278 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesischromosome CDS1387068 1854 + 0.565804
NA Daro_3425 conserved hypothetical proteinchromosome CDS3676222 735 - 0.631293
NA Daro_1521 Protein of unknown function DUF1109chromosome CDS1630898 618 + 0.584142
NA Daro_4081 Protein of unknown function DUF6, transmembranechromosome CDS4375565 846 + 0.635934
NA Daro_3306 extracellular solute-binding protein, family 1chromosome CDS3555203 1311 - 0.596491
NA Daro_3625 Glyceraldehyde-3-phosphate dehydrogenase, type Ichromosome CDS3898157 1020 - 0.645098
NA Daro_0931 ATP-NAD/AcoX kinasechromosome CDS1009727 930 + 0.610753
NA Daro_3560 Ribose 5-phosphate isomerasechromosome CDS3814942 699 - 0.613734
NA Daro_4186 conserved hypothetical proteinchromosome CDS4484609 804 + 0.646766
NA Daro_2249 Protein of unknown function DUF6, transmembranechromosome CDS2432242 1053 + 0.581197
NA Daro_0358 Protein of unknown function DUF1228:Major facilitator superfamily MFS_1chromosome CDS390481 1203 + 0.63591