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# Rickettsia felis URRWXCal2, URRWXCal2; California 2

>RF_1217 unknown
MLLIIFTLRQLKSDDPLVDIRLFLISNFSVGVIVYLLITCVLGSIMYLMS
LWLQFIKGLSPLYAGLYMLPAAIFALIASVVMPYLLTRFTARIIIFSGLI
FTTISLILPSILDYRDLLSNTIYLGLLGIGSSLCLSTTVTVMMNAVPAER
SGGAAALQETAYELGNVLGIAVIVSITSFIYSNDLVIPNGVSVSMAEIAR
DSIGEGIIIAQQLPPSFAHDLIKEVNIAFTNAFI
>RF_0829 unknown
MFRLLLICATFLLLYFGFTLIESFDSKVFISLYDYNIETTLFFSLILGLL
LLISCFIVIRFLILIIDLPSKIHNIFNKRKVNHDRYTLILAFAEYIMSNK
AKSASIARKNLSSEDLKDSQEFHNLILAVTEEDVDRKISYFQKLITSKEF
VFYGSKNLAKLYYDKSLYEKAENYATKAYNFNELDSDNLITLMRCYARLS
LWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQEVESNNTANAIDYLET
AIDLNFYNDELLEFYFNLNDKLNVNKKTKILKDAFRIIPSLKLVQLFKKF
TSLSDRQIYEELTQQLDAKKDEILILAIEAYLEL
>RF_0203 Beta-glucosidase
MSYYVLKERKEHIMTIRQMVKPVIIGISGPELTDAERDLFEEHNPLGVIL
FRRNIRKNDNGEQDKETLIKLIADIKEVLGENTIISIDQEGGRVKRLIAP
TFYDAPAAKDFTNPQTCKHNYSTIGKELREVGINLDFAPVADLIHEGADK
IVGDRSFGSEPEVVVPLCLAAIDGLQEEKVGACIKHIPGHGRAKVDSHIG
LPIVDTSLKELEDTDFKVFKELAKHDNIKLAMTAHIIYKALDSENPATLS
KKVIDYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECT
GEFNKMSEVLGSVSESSIDKFSDLLIA
>RF_0340 unknown
MKIRFIIISFIALILVGWGYAAYKFEHQSKENIISILDEYGEYVTYDSIK
VNKYGFSITLNKVMLKPIDFYFDEIVIRHIPFLNITKIDSYGNDVKITIA
QDEKNIFYSPDHHTTIWFRKSLFNREPDYWKLSLSDNKSTLYSSLDAEKL
AESDISNSVITNTKTSDNLNLLILDGENTVSFISENYRGNLYDKIFEFLR
DKIANDSDTASFEYGLTKLDILNLPISYNSKLKLKYSDELLALGKLLIQN
FSLNQKQDENMHAVIFMQMLGELVKGKPFLFSCDIERKGKVESYLYKLNI
EKDKIFDFALNSKSTIEPSETYQKTAVEALGSYFSNGLNKRAELDKIFKL
TSPITQEDGEKVMGVFAKINNSEFNLKGEFDPEAKKLSGKTNLVMDDFNF
AIDIDMPNLDNPLNLESVIKLSDPNAFINNFVNYTDNAVIPVLNKMEGSK
EFALNLGKQSSVIKQYGFRAIEAFSKNSELKDGESLVVDVKGKDTGLTFN
DKAIDQIFGDARVLEFMNAMAQIEQERKQVVGK
>RF_0411 Chitinase
MIIRCIIMQRAVKLHTGNIKKHYNHNFDKLVLGFSVINGDKGEKEAIIKL
SADQLGLQKFEMTTVGNWDMLAAYVNCGFPAYAGEDYPNLYTQQKAQGVL
GAFPNLKKASPEGTKFALSVGGWTMSEAFHEMAKSPAARKIFNDSIVKFI
EKFPMYKQIDVDWEYPGAAGNSNPHGPEDGGNYTLLVKELRETLNAKGHT
DVVIAIAAADPAKLALSNLKDLVDAGVTQIHLMTYDLFGGTYGEGKLAHY
TNLYSRDGDNKEWSINQSVKYLIEELKIPAKCVHIGYAGYSRSAREVEIE
SVSPLKGTYKVDPQIVGTFENGVTEQNDVYFNYFDPSTGKGKNGFILYTD
TVANADFLYNPTSKVFMSIDTPRTVKAKAEYAKKHGLGGIFTWTVDQDNG
ALSNAAHEGLGHKCVKQNIDMSTFYFEGETELVGYSSDTIVL
>RF_0166 Sugar kinases
MQYLKSVKVPKGESVVISKDIAAKISRDLKPISKQLGGSVNNTAAGLANL
GTRVSFLGSVAYDNLGKQYIEAIEKYRIYSLIRKVNSSKETGVVNIIISP
DGERTMLAYPGISRDLPPLDYKIIKDYKIILLEGYLWHEDGDDDALKEFL
HIAKNNEVITAFTFGSYKQVKKYRKKWSELIKEIDIIFSDREQIYALFKN
TNWDEVVNNLQKYDTIFVVTDNKNGAHIIYRDQKIYIPAYNIKYITDTTG
AGDQFAAGFLYGFLNNYDLEKCRQFGTKTAAKIIQQIGAKPLKITKLNSV
KFLFKQYTLK
>RF_1327 MFS type sugar transporter
MLGYEKEQRSLTKEQKQAVGLLSVGTLLEYFDLMLYVHMSVLLNELFFPK
ADAYATSLYSIAALCATFIFRPLGALVFGYLGDTYGRKTTVVITTMMMAT
SCIVMALLPTYNEIGITASIIIILCRIVQGMSSMGEVIGTEVYLTEFTKP
PIQYPIVALATVFATVGTFAALGVATIVTSYGFNWHYAFGIGAIIAVVGT
LARTALRETPEFANAKLKLLKTFEKANRDIKVLENNPIWKEKINKKTAIA
LFIMDCAWPVCFYFAYIYCGDILVTKFNCTPEQVIKTKFQIIYNRTYKYN
NSSSIKL
>RF_0125 unknown
MLNLGCESAINLDGGGSSTLFMGGKIINNVTGDEDEALGEHTIRPVSDAI
VIIPNNIK
>RF_0867 unknown
MKKKYKNTLVYEVRNLEEARNFLSSEKGKFVLTTPSGSVKYYGILVIDQM
LKALSIEFPEKVVDIIADVGDDHPALFTAIKLGYNNIVYTGDSKEAKGLF
CKTKTVIASDL
>RF_0386 unknown
MFILETKIEEFILNNSDLKDVHAATIFAFDDKKLITSFFGKTRSESGKSE
ENNSIWISLGFKSNNHYQWTTPERIVSPQYFRDHHIPLKQDNGIISCGNP
VITFFNNQLLIFSKIGPYPRTWSGILSRSYDQGLTWQKPELLWYSRTST
>RF_0954 Proline/betaine transporter
MASLVVFVTLGATVALAVGTLVTSFGLDWRIAFWFGAAIAIVGAVARTNL
RETPDFIDAKRRIKKTVAQAGIDSNRLKSSPIWSEKINKTTAIAFFFIHC
GAPLWFYIVYIYCGNMLKNSFNYSAAQVIHQNFIVCGTELISTIIVTYLV
CKIHPLKVLKVRLIIFSIVAIMSPILLNNISNTIELLLFQLFIVVFAPTT
FPAGAVFYVRFPVLKRFTCGSFIFALSRALMFAVSSFGTIYLIDYFNHWG
LLFFIIPILIGYTLGVNHFIKLEEEAESYY
>RF_0439 MFS type sugar transporter
MLGYAKEQRSLTRNQKEAIGLLSIGTFLEYFDLMLYVHMSVLLNKIFFSP
DNTYSVKILTAFAYCSTFIFNPFGSLLFGWIGDNIGRKPTIIITTMLMAC
TCIGMAILPSYDEIGFTAAVLVTLFRAIQGISSATEVTGAALYITEMVKP
PLQYPAVASFSVSSTLGTIAALAVATLVTSTNLNWRYAFLFGAFVAITGT
MARTTLKETPDFIDAKRRIKLAIEKTGLDPKKIENNDIVKEKTNLKTILC
YFLIQCAYPVWNYFGYFYCGNILTEDFGYNPAEVINHNFYIAIGDILGCI
FLTYLSYKIYPLKILRATFYVLVTFLCFFPFIMQNLTIPYIMLIQLFFLL
FAPTAFPASAIFYKHFPIFKRFMHTSLIYAISRAIMLLITSFGLAYLTEH
FNYWGILMIMIPVTIGYYFGLRHFENLEKNSEHQI
>RF_0955 Proline/betaine transporter
MLSYAKEQKSLARNQKEAIGLLSIGTFLEYFDLMLYVHMAVLLNELFFPE
ADARAASLYSAIAYCSTYVFRPIGALIFGWIGDTIGRKATVIITTFLMSI
CCLIMTNLKTYAEIGITATFVVTACRIAQGMSSMGEVVGAELYLTEMTKI
PQHY
>RF_0309 MFS type sugar transporter
MLNAKNVNSNIPLKVALFTSLGSGLEYYDFVIYGMMAKYLSDIFFSVNDS
ISSMIQTFIVFAVGYLFRPFGGTIIGMIADTYGRKKTFVVVMLTMGFSTM
GIGLLPTYNQIGIIAPIGLLVCRLCQGISLGAELPGATTIISEYAPTGKL
GSVMLSSISIGALMATAMVATLNKLYSYQEIIEGAWRIPFICGGILAIIS
YYIRKNISETPEFLQEKNREQTDTNLLIPLKLLLSQNLVNIAIGLGLVFF
HANLVIINLYFPVYLNKYFNYELVDIYSSMTISMITSFIFTIIFGWLSDY
VSKLKILLCSLILFSIFLFVSFALLNKGTFWSLQIFFIIYQLFISLFFTS
YMPILSRLFATKMRYTAIALIYNSAYSVASFIPVIASYLLEQYNSPLILG
IFFIISIALSLISVITIQNKKINYY
>RF_0398 MFS type sugar transporter
MSFSCIVMANLPTYAQVGASTAWIVTICRIVQGMSSMGERVGAELYLTES
VGVLKRFPAVAFVGDVC
>RF_0397 MFS type sugar transporter
MCASLGLTVALGVATLVTSYSFNWRIAFWVGAGIALIGSAARTTLRETPD
FVDAKRRIQETIKDSNIIDVAKIKNNPVLQEKVNKKTAIYYFLIQLAQPV
WFYFAYIHCSNILKDSLHYTAEAVIHQNFTISIVEFFVALALTCLCYKFH
PLKILKTQLVIFLTFLLFSPLILDNITQGWQILLIQLIVVTFSPSEFPAI
PIFHKSFPVFKRFTYASFIYASSRAAMYVISSFGLVYLTERFNNLGLLMI
VIPIIIGYSLGISHFKKLEVEAGNYY
>RF_0441 MFS type sugar transporter
MLGHEKEQKSLTRKQKEAIGLLSIGTFLEYFDLMLYVHMAVLLNNLFFPK
ADPDTAALYSAIAFCSTFVVRPVGALIFGWIGDNIGRKPTVVLTTIMMAF
SCFIMANLQTHAEIGITATVVVTICRILQGLSSMGEVIGAELYVTEITKP
PVQYPSVALIPTASTLGGMAALGVAAIVTGFGFNWRLAFWFGVIIALVGG
IARTALRETPVFVDAKRRIKLNVEEAGYNSRFVDNNSIVKDKVNKKTIIA
LFCVGCTWPVCFYFVYIYCPNILKNILHLTSEQVINQNFIVSIVHLISYL
ILTFLSYYVYPLKILRVKLVIFTVFILICPYLLNNIHNSFDVLLIQLFVV
LFGFTGVPARPLYYKHFPVFKRFTYPSFIYALSRAITHVISSFGMIYVIK
YFENWGLLLLIPTAICFKWSIDHFEKLEIEAGNYP
>RF_0221 Putative oxidoreductase protein
MRILITGANGFIGSYITAELLKNNYEVICCVRDVESTKKKFPTAEVIYCD
FNIDLTPQSWINRLNNIDIVINVSGVLASSHANNIENVHVNGPKALFKAC
TLTNVKRIIHISALGIDDEKNTAYALTKKATEAYLQKLENIDWVILQPSL
VYASGCYGGTSLFRGALATLPYFIPLIGDGLQQFQPIHIDDLTKVIIHCI
EREGKIHKLLKIVGPDIVTMKDILLGFRRWLGVNPGRLIKIPLIFIKIAA
KLGDFLKIGPINSTAYNMLLQPNIADKKDFIDFTSIIPRNLQQGFATEPL
TVQSIWHARLYFLKPVIKIVLGLFWIMTGIISSIFAYDASMQIIISLGFD
KQIAPYILYGSCFTDIILGILLIIKNKISRICSLQILLILAYTLLLTYLK
PILWLDPLGPIFKNIPIILLTLVLMAIERDK
>RF_1218 unknown
MGNNGNRRSSYRTRTRGVLVELLSWQFAFFINAPIALVIIAFGIVWIPES
SNPSNEPWDWIGVFQSFFGMAALVQGIKMLAKYGIMNLASGGILLNWYCV
TNNIYLTPT
>RF_0948 HAD-superfamily subfamily IIA hydrolase
MNTLKLKNIFDLIDDYDVFLFDLWGVIIEGGHTYPDVVENINKIIKRKKV
YFVTNAPRNIFSLHQTIKSWGVNVLPEMIISSGEIAVQMILESKKRFGIE
KPVIYHLGHLENDIINGIQCPITDDINKANIFLMTIYRDENENLDLNEFD
ELFKIVVQRKMVNICANPDLGINQHGIYRYCSGYYAEKIKQLGGKVIYSG
KPYEDTYSKILKECHNTPKNRMLMIGDTFYTDILAANRLSIDSGLVLTGN
SREYHINFDNIDEKLDSLTKAAIKQSIMPSFVVSLS
>RF_0394 Major facilitator family transporter
MLGYEKEQRSLTRKQKEAIGLICFGTFFEYFDLMLYIHMAVSLPD
>RF_0399 MFS type sugar transporter
MLGYEKKQKNLNREQKQAIGLLSIGTFLEYFDLMLYVHMAVLLNELFFPQ
YDTHVNRLLAAFSFCSTFIFRPLGALLFG
>RF_0452 MFS type sugar transporter
MLGYEKTQTSLNRKQKQALGILSIGTFLEYFDLYLYVHMAVLLNELFFPK
ADPQTALIYEAAALCSTYVFRPIGALIFGWLGDNIGRKSTIIITTLLMAI
ACFIMTNLSTYDEIGIVATWVMIACRMAQGMSSMGEVIGADVYLTEFIKP
PVQYPAVATLDSFCILGGFGALCLASLVTSFGFSWRIAFLIGAGIAIVGV
IGRTSLRETPEFVDAKRYLRKTLEQANIDPKKIKVILKLL
>RF_0451 MFS type sugar transporter
MLVYLSCKIYPLKIIKIKLIIFGIFILICPYLLYNLTSPLQVFFIQGFIM
LFGCFMSPAFPIFCKYLPVLRRFTYASFSFALSRAAVFTITTFGSILLII
YLDHWGVMVILVPVTLGFWYGVNYFKKLEKEAGNYPEKLFEVY
>RF_1219 Multidrug resistance transporter protein
MISQFSQTEYITKDNSSSQSYKFRWHILIILSICLLLVSTDATILHAVMP
TIILDLKPSNLQQLWIINAYALVLSGLLITAGTLGDRFGRKRLLLWGLLV
FSIASMLVYSI
>RF_0385 unknown
MLVRPRKTDSLMSTYIHRSISINNGIYWSNLEPVNLLNPDSAIDAINLGD
DTLLLTYNRVINNRKSRNILSVATSYDEGLNWHPITIRNSIYPEGDIEYS
NILSEEYSYPTIIMSPDNNEIHVIYTFNRINLKHKVFQLLPK
>RF_0733 addA, Erythrocyte adducin alpha subunit
MLDADKQSSRLVNDLKQNYVMLLRNHGAITCGKTIHEAMFYTYHLEQACK
TQCLLNSTKEQELIIPSIEICTQTVKDLLSFEEDLGKRDWEAWLRLVKM
>RF_0834 ampG1, AmpG-related permease
MLNNSHLLIIWLFGLISGFNLMITGNTLNYWLAKEDIALQTIGILSFITL
PYSINFLLAPIFDAVQIKYLNKIFGHRLSWICLTSTALIFLIYIFSFLDP
RTNLVLFTFTALIISFFSAAQDTILSALRTEIVPKESLGFTSGIYIFGYR
IGMLLAGSGAIYLSIYFTFNEIYKIFAGLVFIYLILLIVAARYTNSFGLV
EERICHSPSFLCHSRGSGNPNNEFFIKRYYSNFLKIFLDSRFRGNDIKSG
NDISLAYFIILILIFLVLYRLPDNLINVMINPFLLHLEYDAFEIASVGKF
WGVVGAIIGGLVGGFIMKHKNILNSIFLFGIIHALGHILFIFLEINGKNS
LLLFITIGIESITGGMTMTAYIAFISSLCQGKFRATQYSFLSSMMGISRS
IFPIISGYMVVNFGWQNFFLFTTIITIPSLLILLKIKTKLQ
>RF_0265 ampG2, AmpG protein
MVSCICCVYILTNFNPNTHFIPFALCLVAVAFFSSIYDMLLQSSQMLLIT
NKNWGISEAACTTGFRIGILIAGSGALYLSTIISWQDVYRSMAILCIPSL
LLIIIYPLKFKDKTIINDFDRFWYAFYDFIKKPKWLIIVSFMLLYRLQDN
FLSIMPNMFYLDIGYTKKDLALGYKAFGMCAAILGGFIGGFLCRKYEYFY
LLKRALIYHALSSLSFLFLYFYNRDITSLYIAVFFQEFTKGLTMSPFFSY
QLRCCSSKYCITQIALITSIAYISTILFGSISGYAATYLGWTYFFLVAGF
CFIPAYILIKYLPPYVIPS
>RF_1247 ampG3, AmpG protein
MYKKLYLIGILLLGLISGLTFNLIFFTVPYQLSEAKYTTDIIGSISLAAF
PYCLKVIWSPFIDKYSIPFLCSKFGHRRGWALVSQIFLILAMTGFLNVSP
CNNLYITAIILFIISFCSSTQDIVLDAYRIERPTSKEELSMAFTFSSIGF
RLGMLLGSVGALYLSIIFGWNTVYKFALFITVVGPIVILCIKEPKPKEKR
HTTTNLIGLQQYFEVIKKSIISLKNEQQYLLLIMLFVFLYKAADSIPMAM
SSPLFLDLSFTTHEIAVIYKAYGLLIMIVGGALGGVLAAKMGIFHSVLIG
GVIQLLSPLMFMILATIGYDIRIFIITVTVQNFCAGFAGTIISIYFASLC
NSEFVATQYSIIASFSSLSRIILASLGGICAKYLTWPVFFLGNTLFSMLF
IPIFYKIYRKKLDFVNISKKI
>RF_0608 ampG4, AmpG protein
MLITKIFKDYRLFEIFILGIVSGMPLVIIFSTLSVWLKESGIDIAVITTF
AVARLSYSLKVFWSPLVDNFKIPFLSRWGHRKSWLILCSSLMVLVLIAMS
KENPEVSLTSLYFLTIALGFLSSTFDIAVDALRIDKFDQETQTIASATAV
FGYRIGMLITGAGALYLAEITGNNWQLTFVIIAIIFAVATIFIITVNEKE
LVREKVNITSIISWIYAVINPFKDFFKREFAVTILLAVIFFKLGDAMLGA
VASPFYIELGYTKGEIAIIAKLYGLIATLVGGFAGGIVMYKVGNFKGLII
TGIAQSLTHFAFIWLNHQPPSFEALLIAITIENFAAAMGATALVGYIGNL
CNKKYSATQYALLSSSSSLCNNTVTIYAGKLVNMMGWDGFFIFTIILALP
ALFILMYLNKKVNV
>RF_0358 bcr1, Bicyclomycin resistance protein
MKIIAKIPAWMLLCLFILSPTTETIYTSGLPSLTKYFGIDGGITQTTSTL
YFLGFALGILTLGRLSDIYGRRPIALLGLFIYVISSIISIFAVNIEMLMI
ARFVQAFGVSVGSVIGQAMARDSYQGSELSYVYASLSPWLLFIPSLGSSI
GGYIIEYSSWHYVFVFFSLTGTILLALYYKVLPETNSYIDFSQSSKYFEV
LQVIIKDKILWLYAFIIGAFNGIYYGFFIEAPFIFIDKMKVSSSFYGKLA
FLLSFAAIFGGFLGGYLIKKRHVHDKKVMGLGFIFSLCGCILFAVNAFIL
EVVSASHSLAIAMIFVPMMIHMVGHNLLIPMTLRYALVDYAKVTGTAGSI
FGAIYYVVIAAVTYLVSKIHSETISNFALLCFVLSISSAISFYCIWVLYK
KKHKL
>RF_0212 bcr2, Bicyclomycin resistance protein
MKLLITVIIMEILAGAEIDLFVPSFPEIQDTFNLSTFMTELLLGVNLTAY
CITSLIVGNLGDRYGRRPIIILGLLIFNLGSLFCVFANNYEAILFGRFLQ
GCGISSVAVLVYVVLADIYSVQEQQKLMGILNGTITLSMAFAPVLGSYVN
LFWGWRGNFALLFTLGLISLILGILFIPKREVNKKIRISLKEYIPIFKSP
KAIYYILTMIFLAQGYWIFIGIAPILYMLDLGVTLEYFGLYQGAMAALFS
IMSFSSGYCFKKFGIRNCFYFGVIFIILFLLGNSILVIYNINNPLTITIV
TLLLSLGVIYPINILWPLLLEAIPDGKARMTAMFTAARLILTAFGLQLVG
FLYNGTFTPLGITISIVTLFGLITLPKLFKYDKVFEISDRV
>RF_0539 capD, CapD protein
MFVDKTLMITGGTGSFGNAVLSRFLKSDITNDIKEIRIFSRDEKKQEDMR
IALNNPKLKFYIGDVRNYKSIDEAMHGVDYVFHAAALKQVPTCEFYPMEA
INTNVLGAENVLSAAINNKVAKVIVLSTDKAVYPINAMGLSKALMEKLAV
AKARMRSQGETVLCVTRYGNVMASRGSVIPLFINQIKQDKDLTITEPSMT
RFLMSLVDSVDLVLYAFEHGRQGDIFVQKSPASTIEVLAKALQEIFGSKN
ELRFIGTRHGEKHYESLVSSEEMAKADDLGGYYRIPMDGRDLNYAKYFVE
GEKKVALLEDYNSHNTKRLNLEEVKELLLNLDYVQEELKNA
>RF_1124 emrB, Multidrug resistance protein B
MSNDNLQPPALSKKQLFAFFGMVVGMFMSVLDIQIVASSLSVIAAGLAAS
SDELSWVQTSYLIAEVIIIPITGFLARLLSTRISYFIAALGFTVMSVLCS
LATNIESMIIFRALQGFFGGAMIPTVFSTVFIIFPASQRPTVTILIGLVV
TVAPTLGPTLGGYITEILSWHFMFLLNVIPGIFVCTVVFLYGDFDKPNYK
LLKNFDFLGILLMALTLGLLQYVLEEGNKKGWLEDNLILFLSIAVALGFV
LLIIRELTFINPILDLKTFLYKDFTFGCLYSFVMGIGLYGAVYILPLFLF
TIAGYDTLQIGATMMVTGGAQFLSAPLAGRMLGLGVDLRLMLIIGLGGFA
LGCHLNSFLTPDSKFAAFVLPQFVRGLSLMFCFIPTNNIALGNMPKERVG
NASGLYNLTRNLGGAVGLAVISTILTNDTKIFMQYLSENISSTSIMALEQ
LDSYTELLSGKVLNPEKASYLLLANKLNNDAFVIAINNIFNMIGLLFVFI
MLLIPFTSNIKLTGNVNAH
>RF_0716 exoC, Phosphomannomutase
MQINKEIFRAYDIRGNSLKDLTEEVAYKIGFCFAEMTITEDNNKICVGLD
GRLSSPTLCKALELGLTEAGAEIINIGVVPTPALYFADKHFMPAGSIMVT
GSHNPRDDNGFKILQNGKSFFGDQIQDLLARVLDNHVIPAPSCVIPAKAG
IQINTNGDMDSRFRGNDIEYGHNIQSKYLKRILEGININPKLKVAWDLGN
GATGDIIEELKSSLTNENIIINSKIDGNFPSHHPDPTNPANLQELIKLVK
EQNCDLGIAFDGDGDRIGIVSGNGKILFGDQILCIFAEDILKENPNATII
VDVKASQLIVDRIRSFGGNPIIWRTGHPFIKSKMLETKALLAGEMSGHIF
FADKYFGFDDAIYAALRFLDLLSKSDKTLDEIIEDLPKNYSTPEIKIFVP
SELKLKIIEEIKQKLLDDKIEFNDIDGVRVNTEHCWWLLRSSNTESIIVA
RAESASKNGLEEIIAIINKYLEKYELLINS
>RF_0486 lacA, Ribose-5-phosphate isomerase
MKTYNIVIASDDHSGYELKSEIINYLEQKSLKVYDCGTNNTQTVDYPDYA
KKVVDIIIEKSAPIGILISDTGIGMSIAANRSSEIRAALCHNMLTAENAK
AHNDANILILGAKTIDYKIVFDIIDKFLTTKFEGGRHNVRLLKIK
>RF_0513 pkcI, Protein kinase C inhibitor 1
MMYNKENVFAKIIDKNLPAKIIYEDEQILAFKDIAPVAPVHIIVIPKNEY
IDYADFISKAQIDEIKHFFAKISDIANEAGLDKDGYRLITNKGEKSGQTI
FHFHFHIIGGEKLIGLINK
>RF_0735 ppdK, Pyruvate,phosphate dikinase precursor
MKKLIYYFGSNGSDGNASMKNVLGNKGAGLAEMSNLKLPIPDGFTITTEL
CNYFYTHNNNFPKNFQNDLKKAITELEITTGKIFGSTSNPLLLSVRSGST
VSMPGMMDTILNLGMNNEVCNALTDSCGDKRFALDSYKRFLEMYGTTVLS
IPSDLFEQIYEKHKIQADIHKDSDITVELLEKIIDDFKWLHIKYTKQLIN
DPYEQLESAIKAVLHSWMSNRAVIYRKINNISEGFGTAINIQAMVFGNLG
KTSATGVAFTRSPSTGEKKLFGEFLINAQGEDIVSGTRTPMPIIANDSNS
MQAMMPEVFKELSQIAKKLEEHYLDMQDIEFTIENNKLYILQTRTAKRTA
IAAINIAVQMVEEKLISKEQALMRIDPESLNQLLHTRIDYSKGLTSIAEG
LPASPGAATGIAVFSPYDAEKLSHHHKVILVRHDTSPEDINGMHVSSGIL
TIRGGMTSHAAVVARGMGKPCVCGTSNLSIDEKKQILTAGDIVIKQGDII
TIDGGSGKIFLGEMPLIQPTFSEESKLILDWADEISSLKVRANAETVNDA
LVSIKFGAQGIGLCRSEHMFFDKNKIPLVREMIIAPDIERRKLAVQKLLP
LQMEDFKALFRVMKDKPVNIRLLDPPLHEFLPTTEEDKKNLANSLNLPLS
MINQRLHAMHEVNPMLGHRGCRLGICSPEIYQMQIEAIFTAIFELHKKEH
IECNLELMMPLISNVGEIKKLKMDIYEVIEELEQRYRYKFSFMLGTMIEL
PRAALGSKKIAKEVDYFSFGTNDLTQTTYGISRDDIASFLPYYLEEKIFE
SDPFTTLDEEGVGELIEIALKRGKSSNANLKLGACGEHAGNPASIEFFHR
MNLNYVSCSPYRIPIARIASAQAKIKHG
>RF_0675 ppnK, Probable inorganic polyphosphate/ATP-NAD kinase
MNINKIALIYNQNSKHLAIIEEIKKLYNYCKIEEAEAIIVIGGDGELLHN
IHRYMNLNIPFYGVNLGSLGFLMNPLDTKNLLQNIHESTVSILNPLLMQA
EDISGQIYTALAINEVSIFRKTNQAAKFRIDVNGIERMSELVADGALVAT
PAGSSAYNLSAGGPILPLDSNMLCLTPICSFRPRRWHGALLLSSATIKFE
ILNTNKRPVNATADFQEFNNITNVTVKSTKDKPIKLLFNKNHTLEDRIIK
EQFGG
>RF_0391 proP, Permeases of the major facilitator superfamily
MAVVINELFFPKTDPQVASLLSAAAFCSTYLLRPFAALVLGWIGDNIGRK
ATVIITTFIMAISCFIMATLPTYAEKGIVVSWIMIICRMSQGVSSMGEIV
GAELYVTETTKPPVQYTYVGIINIAAQWGGIMALAFGIISITYLFNWRYA
FWGGTIIALVGFIARTNLRESTEFIDAKRRIKNTLENFGINDKELSFKEY
VEEKINIKTILAYFFLVNSGSACFYLTYIYCASLLKTNFNYTALEIMKNN
FCLAIAQLILMITLVLLTKKFHPLKLLKVRAIIFLICMPSSIYLLNNITT
SSSLSKIQLLLVMTSITTSTAVSILYKNFPIFKRFTFTTLIYAFSSIFIY
VVTSFGIAYLVNMLGTYGILLIMIPVGVAFYWGVTHFESLEKVRYNY
>RF_0062 proP1, Proline/betaine transporter
MNRSKLVFSSGIANTFEWYDYVLFGYFAPIIGAKFFPNDDANTSLLQAFL
VFAIGYLARPLGGIFFGVIGDRFGRKVALTSALFCMSAPTVLIGILPTYH
TIGITATILMICVRILQGLSMGGALTGSISFVIEHTSHKHRGFTGSISTS
SICSGLLLGSFVSYIVKNILTASQFDSFGWRIPFLLGFFILFASFYIKKN
THETPNFKNLREQKKILQSPLKKVITNHWFDILISIFINAPGSIIFYLTT
IYLVSFLKISRNFTENEVNSLASLCYVIMIAVTLLSGYLSDIIGRRKIFV
INLIIIIITTPFLLNNFENGDFTSVIISQFILAILAASYIGPEPALQAEF
YPTNIRNTALSISYNTATSIFGGTTPLVFEYLVQKTGHVTSAVYYVILSC
IFALIALYFYKNRSLDKI
>RF_0186 proP10, Proline/betaine transporter
MLGYEKEQRSLTREQKEATGILSTATFLEYFDLMLYVHLAVLLNELFFPK
YDSSAASLLSAFTFCSTFIFRPLGAYVFGRIGDKLGRKSTVIMTTTLMAL
SCIIMANAPTYEQVGYFAAVLITICRAIQGMASVGEIVGAELYLTEITKP
PIQYPVVSFIAVASVIGTTAALAIASLVTTQGFNWRLAFWIGAIIAVVGG
YARTHLRETPDFVDASARLLRKYEKANIDKKELKNDEIFNQKPNKKTTIY
FFIMSCAWPICFYYTYITCGKVLKNSFGYSAAQVIHHNFIISMFHLASMS
LICFLSYKIYLLKILRVKLALLFIFILFSPYLLKSTTTPFQLLLIQIGLI
ICSFDTVPAVSIFFRHFPVFKRFTYSSMIYAVSRALMYIITSFGIIYLTK
YLSQYGLFVVMVPLLIICMFGLNHFQKLEKEAGYSW
>RF_0509 proP2, Proline/betaine transporter
MLGYEKEQRSLNKEQKQAVGLLSIGTFLEYFDLMLYVHMGVLLNNLFFPE
YDPFTFSLLTAFSFCSTYLLRPIGALIFGYIGDHFGRKIVVVLTTLLMAI
TCVIIGSMSTYAQIGITASWVLTICRIIQGMSATAEARGAELYLTENSSP
PIQYPLVAIITVFSAIGTTVALGIASIFTNQNIYQHESSWRIAFFVGATI
AFVGTIARTSLKEADAFSNKKNKLKLRLQENNITLEEIDKDILDQQVPNA
TSIWYFFIQCARPPCFYFVYIYCGDILKRECGFTPNQIINQNFWISIIDL
LGIIGLAFISYKIHPLKILKVKLYLFFTSLIFFPIVLNYNPTPLYIFIFQ
CLAALFVFDHVPAAPIFYKYFPVFKRFTYTSMLSAIAKLFTYIITSFGLV
YITNYLGYWGLFLIFIPVGITFFMGVTYFERMEKNRNL
>RF_0586 proP3, Proline/betaine transporter
MSNSAFLVAFFTTIIRYYDYALFGLSASILAQNFLPNIEQDKQLLGFFAI
LSAAVIVRPLGSLIFGFIGDKYGRTKSIKISMFMSSISTGLIAITPSFEM
IGIFATVILTLCRMVFLASLAGEVDGIKIYVAEKTGDNRKNLNIGIVSCC
SQIGALLAAIAYYYTSNSDIQYLWRFNFFIGAIFGLFAILMRNFFKESSE
FLRKSSKSTIKQIIKDNKTSFIIALLINGAIGGVYHFLVIFLGVFLTKIA
FVNHPEIRFMNIALTTTYGISAVFAGLLADKINPLRQITWTVFASIIVAL
GMQIMLYKQIFNILCPIILIGLAAFYAVPLQIIVQSLFKTNVKMRLYSLS
HSFGGIILSSTTPFFSMLLWQNFKSLSLTLSFFIFLLIILMSTVLVLRKM
LSLHGY
>RF_0233 proP4, Proline/betaine transporter
MTEKQVHARPPRLVDSLLFLKLCRSIPIFHLLVVYMSNSLSKRDFSILIG
NAMDHFDTALYGFLAPLLAGIFFPNHDKVVALILTYSVLATSLFTRPVGS
YFFGVIAKKYDGVFALSHSLIGVAFTTSLIGLIPSHAQIGWLAPLLLVLL
RTLQGIYSEGECAIAKLYILENKEEKKAFKASYLYQTSTMVGIILASFIS
TIVLNVEYNEYWRLCFIFGGFTALIGYFLRKSGNYTSLRATKRSVAISGI
LPKIASPKPTVFPRNDVVSSLLLDLNTIWNSKLSILRISFVVGFSYMTYI
VPFVFMNSFIPLITDISIETMMKFNTEFLIFDMVMIPIIGHLTKKFHYLK
ILNGTLILMSLSIIPLWLFLNNSSIWYVNFVRIWIIILGVGFLAPLNCWL
NDLFKTADKYMLVGIGSSIGASLIGRLTPSICLMLWHVTGSSLSIAVYIA
VISMVTLWAVRAER
>RF_1208 proP5, Proline/betaine transporter
MKQTKSSNKVLGAFLGTIIEYYDYSLYGFSAAIIADKFFSAGTDPLTKLV
NVFAVYAAAYLSKPMGAYIFGRIGDIYGRKKALSFTIIGIVIPTLIIGLL
PDYSSIGVWSTIILVLCRFMQGIFIGGEYDGAAIYVIEHLGAKYRFTASA
ITRCTGVMGLLCGIGATNFFNSHIFLEWGWRIPFLLSLPLALITLYYRRK
FDETPEFKKAHHSQDSIEKLSSIIKKQWKNIARLIFLAGGFGATYQIAII
FMKQYLPIVLPSVGIIMSSFSVLIVICFAVCMPIAGFIADRLGVNSVLKI
AFICTITASVFFVIAVKYQMTNLGLAASLMLAASVAPFNALAHSIVIKSF
VVKERYRVISLGHNIGSMLMSGTANYICAKVIKSFDFNLFPILYLCMFAI
LAYSMTMLFSKDTILNKDLKNDK
>RF_1349 proP6, Proline/betaine transporter
MRKVVISGMIGNALEWYDYALYAQFAYIIGQHFFPDSEIRETLTFAVFAA
GFIVRPLGGIIFGNIGDRFGRRTALVMGIITMAIPTAGIGLLPGYKTIGI
AAPIILTVIRLIQGFSLGGEFSGCISYIVEHASFEQRGLAGSSSFVSMCG
GMLLGLATAAGFSYFMPADMLFEWGWRIPFITGLFISSVGLYIRKNLAES
PIYKKAKETGRLARFPLRETLTKYPKELIIALGLYITVTAPFYTSTVFIG
NFMQTLGYTSQQSTIVSSIILIVMMIVFPISAYVSDKVGRRPVLIWGIIL
LILSVYPIFLALGSMNFTLAIISQVIFAGIIAIYMGPIPTVLVEIFPTSI
RFTGVALSYNLAAAIFGGTAPMLAMILTKVTGDNYAIAYYLIALALLSSI
ILKFYKETYKKNLVS
>RF_1395 proP7, Proline/betaine transporter
MNRSKFIFLSAISGNVLEYYDFTVYSVFSLIIGQVFFPGESEFIKTLLSL
GVFAVGFLTRPIGGILFGYIGDRYGRRIALIISMLGMTIPTFIMGLIPSY
ASIGIYAPITLVIMRLIQGLCISGEGTGAAIFILEHRQNLRAGFTAGLVH
GSNIAGTLIATFIGIIIERYFSHIDFAWRFSFLLGGFMGLAGFYLRLRVS
ETPIFKMLEKKKQVLKAPFSNVIRTAWRSMFLTMCIGAIASSVMYLVKTY
INVFYYNVMHLSNTIALSYLAYSSFIAMIAMPLAGGTADIIGKFKMAMLV
GTAILILILPTMLLMSAEEMWQQIIALTMLGLLAGSIAGTAYIFVISLFT
AEQRFTGVAFSYNFAIAIFGGTSPIISRWLVEHTGLFYAPAFYIMIIAAV
FLVIMYMMRKVIKSLLNNYENRK
>RF_0885 proP8, Proline/betaine transporter
MRGYEKEQRNLTREQKEAIGLLSIGTFLEYFDLMLYVHMAVFLNELFYPK
ADAHVAALYTAAAFCSTYLLRPFGALIFGWIGDNIGRKSTVVITTTLMSI
SCVAMATFPTYAQVGASAAWVVTICRIVQGMSSMGEMIGAELYVTEITKP
PIQYPAVALITISSSLGGFVALGIATFTTTQGFNWRIAFWIGAIIAIVGA
VARTRPRETAEFVDAKRQLKKSLEPALEKISIKKLEDNPIWKEKVNQKTS
LALFLIQCAWPVCFYIIYFHCGTILRDSFYFTSEQVIHQNLIVSIFQVLG
AIIWTYLSYYVYPLTLIKFKTVIFTITILIFPYLLDNINLSSDLLIVQII
LITFSLSCSSGMAIFYKHFSVFKRFTYASFMYALSRAFISIITSFGLVYF
MKYFGNWGILIITIPVVIGFIWGIFHFQNLEQAIGNFPKKKKYLALDLQE
E
>RF_0004 rfbA, O-antigen export system permease protein RfbA
MIKYFFSKKYWRAIALLVKASIIRQNKDSFLGSLWGLIQPFIHIMVISYF
FGFLLRQPREFMVMNLVGGIPLWSFIVSSLTICSSSLVTRDQIIKKVRIS
KTFFPVADSLGQLYTLICSFSAMYFAFILLFPEKFSWQIIFMPILILPLI
ICVISGSIAVAFLTPYIRDIPQMLSVILGVIYWSIPIVYPYSLIPESKKI
YFEFNPFFLVIRPVQALVIDGTLPDMMLIVKSIIVAFITVCISYLIYRQF
SKRVIYYL
>RF_0003 rfbE, O-antigen export system ATP-binding protein RfbE
MSLSHSKVFIEITNGYVEGIDTHKRAQGLKHFFLKKGVSLSPNIPILNDI
NFSCQEGEKIAFIGSNGSGKSSLLKLIAGIYPLKSGTVKVHGDIAAIIDM
GVGFEPEQTGRENIKMLMLYNNMLDKYSRKIEKEIIDFSELGNKIDLPIK
NYSSGMLSRLAFSVSIFQNPQILLLDEVFAAGDSRFIEKSLNLMKSKFKN
TPISIIVSHQEEIIKDNCDRCILLKDGNIIGDGTPSEMFKIYNRLLG
>RF_0061 sam, S-adenosylmethionine transporter
MNDALKTYLTGIGWFLLSLVSSSANDVMSKYLGTRLHSFEVAFFRFFFSS
IVLLPFVFYHGKNTLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTAT
VVSFSIPLFTLILAVFFLNENIIWQRWVVTVVGFIGLVVTLKPHTEDFNP
EILYFVLAAISFAMLDIINKKFVIKESMISMLFYSAIVTAVVSLPVASQY
WLTPSGFELALLFVLGSSGSLILFFLLKAFSMVDATATAPYRYLELVISA
IAAYFIFSEFPDKSTLHGAVIIIPATLFIIYSEKKAMSRKHESQ
>RF_1048 suhB, Extragenic suppressor protein SuhB
MQPITNLLINALRKAVKFLHRDFLELEMLQKNSVRNEEFCKRSYLRLKTL
LYEELQKHTQYLFFPEDQFDLNNNYESVFLINPIDSPNNFARSIPFFAIS
VTYLKRNQEVLTPTSTVIYFPALNEIYYAEKGKGAWIEKNNLNSNYQGLR
LRVSDNADLKNCLAIIEDVNHNDLEEIEVDNIRSFGSPCYGATLVASGKA
DLICLSLLNFTLYYAFELLIKEAGGIIIDSNDKFIYSNRYITKKVKKY
>RF_0964 traX, F pilin acetylation protein TraX
MIITRNKHQSNYQDLLKTLAIIAMIIDHVGLYLYPELTIMRIIGRTAMPI
FCFFAGYNFHDKPKTHIIIFGVLLQIYTTVLFKQFLTTNILISIYLGQWY
IYYFRNSLTHFLYSGYCHVIIMVILWYISWALIDYGTLVIAIMILGFISK
HEQTNLKLCCFIAIFASFVHSTLFTLAISFNEFNFSNTELILDLIFLMIT
YTLMILKDYSQKIPINLKWISRNILYIYCIQIIILQFIFIYKYTYGF
>RF_0121 uhpC, Sugar phosphate permease
MTDTKPKIKTPRSPYVKKYNSWRIRILYSIIIGYATFYFCRQNFNIATPA
IREYFGVTKTQIGWILTASSIMYGVSKACNGFISDKVNARIFMVLGLLFV
GVITILIGFADSLWLIGILWIASNWFQSMGWPPATKMLTHWFASKELGTK
WAMGATSNQIGGALAMISCGYLIDKFDWRVAFFVPGVVACVVSLFLYNRL
RNSPKEVGLSTVEEYKEYPPEAIGDYEKLLTPQLLKMVFCNKLIWYVCLA
NMFVYIIRSGVIYWAPTFLKDLRNISLANVGLQIGLYEMIGIPGALIAGV
LSDKLFQGRRGPVASICMVLLSLLLVLFWKIPIQSELLSIVILSLIGFFV
SGPQLLVGIAAADFSTRHAVGTANGLSGLFGYLGAAIAGVGVGWISDNYG
WNGVFIFFSISALLGGGLFALTWNRSAKK