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2024-05-01 09:06:22

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

Number of genes found: 103

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Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Bd3895 Beta-hexosamidase A precursorchromosome CDS3765298 1677 + 0.512224
NA Bd0651 chromosome CDS603538 849 + 0.57126
NA Bd2502 2-methylisocitratelyase 2chromosome CDS2406944 900 + 0.48
NA Bd3384 chromosome CDS3291387 990 + 0.536364
NA Bd0333 ampG proteinchromosome CDS316952 1344 - 0.550595
NA Bd2868 hypothetical protein predicted by Glimmer/Criticachromosome CDS2777717 1152 + 0.524306
NA Bd0724 hypothetical protein predicted by Glimmer/Criticachromosome CDS681196 735 - 0.491156
NA Bd0984 conserved hypothetical proteinchromosome CDS929462 441 - 0.535147
NA Bd2163 sugar transport proteinchromosome CDS2065606 1239 + 0.542373
NA Bd1653 phosphoglycerate mutasechromosome CDS1587074 510 - 0.537255
NA Bd0150 hypothetical protein predicted by Glimmer/Criticachromosome CDS135732 1011 + 0.504451
NA Bd3475 chromosome CDS3384753 2034 - 0.533923
NA Bd2669 conserved hypothetical proteinchromosome CDS2587905 855 - 0.444444
NA Bd2888 hypothetical protein predicted by Glimmer/Criticachromosome CDS2797773 207 + 0.521739
NA Bd1128 conserved hypothetical proteinchromosome CDS1065644 321 + 0.504673
NA Bd3629 conserved hypothetical proteinchromosome CDS3525011 1440 - 0.51875
NA Bd3174 putative nucleoside-diphosphate-sugar epimerasechromosome CDS3091273 942 + 0.539278
NA Bd0468 putative peptidoglycan GlcNAc deacetylasechromosome CDS438356 876 - 0.533105
NA Bd1782 conserved hypothetical proteinchromosome CDS1712384 879 + 0.559727
NA Bd0731 hypothetical protein predicted by Glimmer/Criticachromosome CDS692428 1218 - 0.514778
NA Bd3281 putative polysaccharide deacetylasechromosome CDS3200180 1269 - 0.540583
NA Bd2238 permease of DMT superfamilychromosome CDS2136768 930 + 0.510753
NA Bd0008 hypothetical protein predicted by Glimmer/Criticachromosome CDS9925 357 + 0.445378
NA Bd1689 hypothetical protein predicted by Glimmer/Criticachromosome CDS1625547 1224 + 0.392974
NA Bd2756 probable ribulose-phosphate 3-epimerasechromosome CDS2676174 633 - 0.538705
NA Bd3161 putative dehydrogenasechromosome CDS3077712 1020 - 0.520588
NA Bd0073 polysaccharide deacetylase-related proteinchromosome CDS66708 903 - 0.495017
NA Bd3265 probable transmembrane proteinchromosome CDS3180694 897 + 0.544036
NA Bd1720 putative permeasechromosome CDS1655684 1257 + 0.509149
NA Bd2747 hypothetical protein predicted by Glimmer/Criticachromosome CDS2668168 450 + 0.506667
NA Bd1577 multidrug resistance proteinchromosome CDS1507123 1188 - 0.531987
NA Bd2588 putative secreted proteinchromosome CDS2507779 846 - 0.50591
NA Bd0570 HIT family hydrolaseschromosome CDS528703 402 + 0.477612
NA Bd0693 Major facilitator family transporterchromosome CDS644543 1185 - 0.555274
NA Bd0814 L-sorbosone dehydrogenasechromosome CDS763392 2112 - 0.536932
NA Bd0660 conserved hypothetical proteinchromosome CDS611069 1095 - 0.50411
NA Bd0481 hypothetical protein predicted by Glimmer/Criticachromosome CDS450861 504 + 0.484127
NA Bd0264 putative membrane proteinchromosome CDS252777 888 - 0.504505
NA Bd1697 UDP-N-acetyl-D-quinovosamine 4-epimerasechromosome CDS1633893 870 - 0.44023
NA Bd3165 hypothetical proteinchromosome CDS3080103 1839 + 0.495922
NA Bd2492 hypothetical protein predicted by Glimmer/Criticachromosome CDS2394433 1062 + 0.515066
NA Bd1254 probable phosphoglycerate mutasechromosome CDS1190340 492 - 0.514228
NA Bd2438 transmembrane proteinchromosome CDS2346170 936 + 0.526709
NA Bd0453 hypothetical protein predicted by Glimmer/Criticachromosome CDS426029 480 + 0.485417
NA Bd2509 hypothetical protein predicted by Glimmer/Criticachromosome CDS2414789 1650 + 0.506667
NA Bd1536 hypothetical protein predicted by Glimmer/Criticachromosome CDS1459277 1254 - 0.485646
NA Bd2308 MFS transporterchromosome CDS2202639 1197 - 0.524645
NA Bd3279 putative polysaccharide deacetylasechromosome CDS3197503 1152 - 0.501736
NA Bd3129 hypothetical protein predicted by Glimmer/Criticachromosome CDS3035034 597 + 0.510888
NA Bd2714 ABC-type transporter, periplasmic component.chromosome CDS2636511 1044 + 0.514368
NA Bd1678 probable UDP-glucose 4-epimerasechromosome CDS1615053 984 + 0.417683
NA Bd1175 nucleoside-diphosphate-sugar epimeraseschromosome CDS1116610 684 - 0.523392
NA Bd1003 conserved hypothetical proteinchromosome CDS950557 366 + 0.530055
amy Bd1224 alpha-amylasechromosome CDS1159706 1443 - 0.519751
amyX Bd1228 pullulanasechromosome CDS1165222 2664 - 0.510886
bglX2 Bd0146 chromosome CDS129832 1113 - 0.52381
capE Bd1693 capsular polysaccharide synthesis enzyme Cap8Echromosome CDS1629394 1044 + 0.440613
dfrA Bd0142 dihydroflavonol-4-reductasechromosome CDS126649 993 - 0.52568
eno Bd0796 phosphopyruvate hydratasechromosome CDS745744 1269 + 0.50197
fba Bd2339 FBP aldolase, class Ichromosome CDS2237847 924 - 0.517316
gapdh Bd1049 glyceraldehyde-3-phosphate dehydrogenasechromosome CDS994370 1008 + 0.501984
glk Bd1223 glucokinasechromosome CDS1158742 963 - 0.521288
glmM Bd1931 phosphoglucosamine mutasechromosome CDS1843472 1374 + 0.502911
glpT Bd2152 glycerol-3-phosphate transporterchromosome CDS2057560 1542 + 0.50454
glpT Bd2914 glycerol-3-phosphate transporterchromosome CDS2825300 1494 + 0.515395
glpX Bd1919 fructose-1,6-bisphosphatasechromosome CDS1831927 963 + 0.553479
gpmA Bd2727 phosphoglycerate mutasechromosome CDS2649609 747 - 0.523427
hit Bd1069 hit family hydrolasechromosome CDS1015384 495 + 0.486869
lamB Bd1230 maltoporin precursorchromosome CDS1167914 1344 + 0.513393
malA Bd2279 alpha-D-1,4-glucosidasechromosome CDS2175910 1674 - 0.495818
malF Bd1227 maltose/maltodextrin transport permease homologuechromosome CDS1163021 2202 - 0.520436
malG Bd1226 ABC-type Maltose/ Maltodextrin permeasechromosome CDS1162203 819 - 0.505495
malK Bd1225 ABC-type maltose transport, ATP binding protein.chromosome CDS1161158 1044 - 0.514368
manA Bd2919 mannose-6-phosphate isomerasechromosome CDS2829345 1131 + 0.513705
manC Bd2941 putative mannose-6-phosphate isomerasechromosome CDS2851395 1395 - 0.498208
mgsA Bd3047 chromosome CDS2956639 384 - 0.539062
mtbA Bd2344 mtbAchromosome CDS2243692 1365 - 0.517949
pfkB Bd0734 Carbohydrate kinase, PfkB familychromosome CDS695109 909 + 0.50385
pgi Bd0741 chromosome CDS703843 1227 + 0.485738
pgk Bd1050 phosphoglycerate kinasechromosome CDS995381 1206 + 0.503317
pmm Bd0014 chromosome CDS14017 1368 - 0.502924
ppdK Bd1150 pyruvate phosphate dikinasechromosome CDS1090180 2712 + 0.533923
ppnK Bd3172 probable inorganic polyphosphate/ATP-NAD kinasechromosome CDS3088536 912 + 0.526316
ppsA Bd3153 phosphoenolpyruvate synthasechromosome CDS3068012 2685 + 0.512849
pykA Bd2099 chromosome CDS2011007 1488 - 0.510081
rfaD Bd3536 ADP-L-glycero-D-mannoheptose-6-epimerasechromosome CDS3439024 969 + 0.49226
rfbG Bd1665 CDP-D-glucose-4,6-dehydratasechromosome CDS1596627 1026 + 0.513645
rpiB Bd2009 ribose 5-phosphate isomerase Bchromosome CDS1921909 477 - 0.513627
slc39 Bd2019 solute carrier family 39 (iron-regulated transporter)chromosome CDS1929044 1323 + 0.51096
sndH Bd0989 L-sorbosone dehydrogenasechromosome CDS934091 1074 + 0.548417
suhB Bd3335 putative myo-inositol-1(or 4)-monophosphatasechromosome CDS3245976 852 - 0.5223
talC Bd0049 chromosome CDS43235 648 + 0.469136
tcaB Bd0395 drug resistance transporter, Bcr/CflA familychromosome CDS372640 1191 - 0.529807
tetA Bd0461 multidrug resistance proteinchromosome CDS432856 1218 - 0.529557
tetA Bd0657 tetracycline-efflux transporterchromosome CDS607628 1104 - 0.536232
tpiA Bd1051 chromosome CDS996729 726 + 0.498623
wbpM Bd1700 Nucleotide sugar epimerase/dehydratasechromosome CDS1636089 1881 + 0.484848
yapH Bd1130 putative YapH proteinchromosome CDS1067944 4479 - 0.542309
ydeA Bd1364 MFS family proteinchromosome CDS1288726 1182 - 0.536379
ydeR Bd3656 MFS permeasechromosome CDS3546676 1227 + 0.541972
yeeZ Bd0911 putative enzyme of sugar metabolismchromosome CDS862397 720 + 0.505556
yicM Bd3690 putative transport proteinchromosome CDS3569679 1194 + 0.514238
ytfG Bd2906 putative oxidoreductasechromosome CDS2815918 852 + 0.548122