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2024-05-02 16:44:57

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Bordetella parapertussis 12822, 12822

Number of genes found: 217

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Bordetella parapertussis 12822, 12822
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BPP3913 putative carbohydrate kinasechromosome CDS4238167 942 - 0.684713
NA BPP3018 putative membrane proteinchromosome CDS3245036 1299 + 0.674365
NA BPP3273 putative integral membrane proteinchromosome CDS3529820 897 - 0.696767
NA BPP3249 conserved hypothetical proteinchromosome CDS3503869 834 - 0.68705
NA BPP3041 conserved integral membrane proteinchromosome CDS3280893 960 + 0.7125
NA BPP1709 conserved hypothetical proteinchromosome CDS1824751 852 + 0.700704
NA BPP1582 putative membrane proteinchromosome CDS1688206 1734 - 0.71684
NA BPP0059 histidine triad proteinchromosome CDS51566 438 - 0.630137
NA BPP2292 putative membrane proteinchromosome CDS2438709 1269 + 0.669031
NA BPP0692 putative extracellular solute-binding proteinchromosome CDS729964 1047 - 0.660936
NA BPP3523 putative aldolasechromosome CDS3809228 801 + 0.695381
NA BPP0827 putative membrane proteinchromosome CDS893426 1176 + 0.669218
NA BPP0690 putative membrane proteinchromosome CDS727995 1293 - 0.660479
NA BPP4120 conserved hypothetical proteinchromosome CDS4452666 855 + 0.760234
NA BPP0515 putative membrane proteinchromosome CDS547360 537 + 0.476723
NA BPP2977 putative membrane proteinchromosome CDS3200881 1164 - 0.719072
NA BPP2130 Putative membrane proteinchromosome CDS2278541 345 + 0.634783
NA BPP3439 putative membrane transport proteinchromosome CDS3715492 1242 - 0.702899
NA BPP1012 putative membrane proteinchromosome CDS1089228 1287 - 0.685315
NA BPP4346 sugar ABC transporter, ATP-binding proteinchromosome CDS4680854 1041 + 0.695485
NA BPP2118 Putative ABC transport system, membrane proteinchromosome CDS2266745 513 - 0.606238
NA BPP3016 putative exported proteinchromosome CDS3243573 966 + 0.680124
NA BPP2405 putative integral membrane proteinchromosome CDS2569791 903 + 0.693245
NA BPP1060 putative integral membrane proteinchromosome CDS1135561 1251 - 0.778577
NA BPP4317 putative membrane proteinchromosome CDS4648961 1035 - 0.69372
NA BPP1269 probable membrane efflux proteinchromosome CDS1367440 1431 + 0.680643
NA BPP2771 Putative sugar ABC transport syste, ATP-binding proteinchromosome CDS2970039 1554 + 0.726512
NA BPP2188 putative membrane proteinchromosome CDS2339547 900 - 0.706667
NA BPP2630 putative sugar transport proteinchromosome CDS2827630 1677 - 0.649374
NA BPP1685 putative inner membrane proteinchromosome CDS1793819 1278 - 0.672144
NA BPP4168 putative polysaccharide deacetylasechromosome CDS4501665 807 - 0.731103
NA BPP1377 conserved hypothetical proteinchromosome CDS1477851 960 - 0.747917
NA BPP4333 putative integral membrane proteinchromosome CDS4667000 930 - 0.71828
NA BPP3092 putative ABC transport protein, inner membrane componentchromosome CDS3333146 813 - 0.635916
NA BPP2182 Putative membrane proteinchromosome CDS2333208 1287 + 0.659674
NA BPP2183 Putative membrane proteinchromosome CDS2334507 1239 + 0.728006
NA BPP3712 ABC transport protein, ATP-binding componentchromosome CDS4012627 1128 - 0.638298
NA BPP3569 conserved hypothetical proteinchromosome CDS3854987 912 - 0.716009
NA BPP3642 putative sugar kinasechromosome CDS3937488 915 - 0.72459
NA BPP2447 probable integral membrane proteinchromosome CDS2623245 855 + 0.695906
NA BPP1345 putative transmembrane efflux proteinchromosome CDS1446455 1440 - 0.721528
NA BPP1014 putative extracellular solute-binding proteinchromosome CDS1091050 867 - 0.67128
NA BPP1045 putative membrane proteinchromosome CDS1121356 933 - 0.768489
NA BPP1364 integral membrane proteinchromosome CDS1464721 927 - 0.711974
NA BPP1412 putative membrane proteinchromosome CDS1511540 522 - 0.645594
NA BPP1767 putative transmembrane transport proteinchromosome CDS1893563 1347 + 0.704529
NA BPP2430 conserved hypothetical proteinchromosome CDS2604357 324 - 0.626543
NA BPP2555 putative aldolasechromosome CDS2749581 777 + 0.671815
NA BPP1378 putative exported proteinchromosome CDS1478798 807 - 0.739777
NA BPP4348 inner membrane component of binding-protein-dependent transport systemchromosome CDS4683240 876 + 0.655251
NA BPP3713 ABC transport protein, inner membrane componentchromosome CDS4013765 828 - 0.596618
NA BPP4349 inner membrane component of binding-protein-dependent transport systemchromosome CDS4684112 801 + 0.66417
NA BPP2246 putative inner membrane transport proteinchromosome CDS2390644 2514 + 0.694113
NA BPP2427 putative membrane proteinchromosome CDS2601062 924 - 0.709957
NA BPP1411 putative membrane proteinchromosome CDS1510238 1299 - 0.658968
NA BPP1413 putative extracellular solute-binding proteinchromosome CDS1512103 1008 - 0.657738
NA BPP2135 putative aldolasechromosome CDS2283215 795 - 0.681761
NA BPP1376 putative extracellular solute-binding proteinchromosome CDS1476764 1032 - 0.693798
NA BPP2773 Putative sugar ABC transport system, substrate-binding proteinchromosome CDS2972588 1086 + 0.685083
NA BPP4418 putative membrane proteinchromosome CDS4762763 1275 - 0.716078
NA BPP2180 Putative solute-binding proteinchromosome CDS2331523 1008 + 0.656746
NA BPP1125 carboxyvinyl-carboxyphosphonatephosphorylmutasechromosome CDS1198129 894 - 0.675615
NA BPP2444 conserved hypothetical integral membrane proteinchromosome CDS2620132 951 + 0.674027
NA BPP1241 putative integral membrane proteinchromosome CDS1326680 582 - 0.664948
NA BPP1966 putative IIa component of sugar transport PTS systemchromosome CDS2103376 399 + 0.671679
NA BPP2779 Putative secreted proteinchromosome CDS2978536 1035 + 0.717874
NA BPP3633 putative solute-binding periplasmic proteinchromosome CDS3929668 1041 + 0.651297
NA BPP1603 putative membrane proteinchromosome CDS1709541 1446 - 0.728216
NA BPP1738 putative transmembrane transport proteinchromosome CDS1861047 1194 - 0.708543
NA BPP2628 ABC transport protein, ATP-binding componentchromosome CDS2825593 1065 + 0.668545
NA BPP3605 putative inner membrane efflux proteinchromosome CDS3898292 1221 + 0.678133
NA BPP0792 UDP-N-acetylglucosamine C4 epimerasechromosome CDS847863 1026 + 0.679337
NA BPP4347 probable extracellular solute-binding proteinchromosome CDS4681937 1293 + 0.656613
NA BPP2291 putative membrane proteinchromosome CDS2438182 525 + 0.638095
NA BPP3673 carboxyvinyl-carboxyphosphonatephosphorylmutasechromosome CDS3971261 873 - 0.68614
NA BPP1095 putative membrane transport proteinchromosome CDS1167938 1338 + 0.692078
NA BPP3546 putative inner membrane proteinchromosome CDS3833889 801 - 0.675406
NA BPP0350 conserved hypothetical proteinchromosome CDS371203 831 + 0.748496
NA BPP3585 putative membrane proteinchromosome CDS3873114 918 - 0.699346
NA BPP0547 conserved hypothetical proteinchromosome CDS580842 903 + 0.667774
NA BPP3138 putative sugar efflux transpoterchromosome CDS3377916 1188 + 0.708754
NA BPP3021 conserved hypothetical proteinchromosome CDS3248209 1161 + 0.674419
NA BPP2894 probable N-terminal region of alpha amylase (partial)chromosome CDS3106884 681 - 0.734214
NA BPP3019 putative exported proteinchromosome CDS3246487 1086 + 0.620626
NA BPP3491 probable inorganic polyphosphate/ATP-NAD kinasechromosome CDS3774352 900 + 0.685556
NA BPP1574 putative membrane proteinchromosome CDS1681199 483 - 0.679089
NA BPP2443 conserved hypothetical integral membrane proteinchromosome CDS2619212 858 - 0.694639
NA BPP3521 putative inner membrane proteinchromosome CDS3807069 1275 + 0.668235
NA BPP1375 putative membrane proteinchromosome CDS1476263 492 - 0.693089
NA BPP4043 probable phosphosugar isomerasechromosome CDS4378228 603 + 0.645108
NA BPP2355 putative inositol monophosphatasechromosome CDS2513400 867 - 0.711649
NA BPP3653 probable transporterchromosome CDS3948473 1191 - 0.719563
NA BPP2117 Putative ABC transport system, membrane proteinchromosome CDS2265465 1281 - 0.661983
NA BPP0216 conserved hypothetical proteinchromosome CDS228985 465 - 0.711828
NA BPP2772 Putative sugar ABC transport system, permease proteinchromosome CDS2971582 966 + 0.701863
NA BPP3094 probable ATP-binding ABC transporter proteinchromosome CDS3334838 1089 - 0.689624
NA BPP0121 NAD dependent epimerase/dehydratase family proteinchromosome CDS127555 978 + 0.586912
NA BPP0480 conserved hypothetical proteinchromosome CDS514514 1152 - 0.694444
NA BPP2288 conserved hypothetical proteinchromosome CDS2436378 501 + 0.680639
NA BPP3728 inositol monophosphatase-family proteinchromosome CDS4030270 894 + 0.705817
NA BPP1795 putative membrane proteinchromosome CDS1920848 864 - 0.72338
NA BPP1417 conserved hypothetical proteinchromosome CDS1516171 855 + 0.676023
NA BPP0691 putative membrane proteinchromosome CDS729287 615 - 0.691057
NA BPP3174 putative efflux proteinchromosome CDS3415887 1371 + 0.707513
NA BPP0688 putative polysaccharide deacetylasechromosome CDS726564 927 - 0.707659
NA BPP4224 putative membrane proteinchromosome CDS4561776 882 - 0.750567
NA BPP1687 putative periplasmic substrate-binding transport proteinchromosome CDS1795723 987 - 0.653495
NA BPP3524 conserved hypothetical proteinchromosome CDS3810055 906 + 0.707506
NA BPP1303 putative membrane proteinchromosome CDS1405322 495 + 0.731313
NA BPP0939 conserved hypothetical proteinchromosome CDS1011282 873 + 0.699885
NA BPP1270 putative membrane proteinchromosome CDS1368903 1188 - 0.720539
NA BPP0062 putative membrane proteinchromosome CDS54440 1038 + 0.694605
NA BPP1240 putative membrane permeasechromosome CDS1325385 1299 - 0.684373
NA BPP1713 putative polysaccharide deacetylasechromosome CDS1829420 726 + 0.655647
NA BPP1395 putative membrane proteinchromosome CDS1496505 1194 + 0.722781
NA BPP2896 C-terminal region of a probable alpha amylase (partial)chromosome CDS3108193 1059 + 0.74221
NA BPP3356 putative membrane proteinchromosome CDS3615830 1311 + 0.650648
NA BPP0514 putative exported proteinchromosome CDS546118 1182 + 0.519459
NA BPP4228 putative membrane proteinchromosome CDS4565978 1386 - 0.709235
NA BPP2553 putative dihydroxy-acid dehydratasechromosome CDS2746750 1746 + 0.684422
NA BPP4275 MttA/Hcf106 family proteinchromosome CDS4613020 369 + 0.650406
NA BPP2293 putative exported proteinchromosome CDS2440006 984 + 0.671748
NA BPP3093 putative ABC transport protein, inner membrane componentchromosome CDS3333951 891 - 0.672278
NA BPP3819 putative membrane proteinchromosome CDS4135063 915 + 0.719126
NA BPP0076 putative transport proteinchromosome CDS72878 1185 + 0.727426
NA BPP3520 putative inner membrane proteinchromosome CDS3806527 546 + 0.714286
NA BPP3095 probable ATP-binding ABC transporter proteinchromosome CDS3335926 1083 - 0.714681
NA BPP1686 putative inner membrane transport proteinchromosome CDS1795137 501 - 0.672655
NA BPP1013 putative membrane proteinchromosome CDS1090515 504 - 0.706349
NA BPP3899 putative membrane transport proteinchromosome CDS4220853 1203 - 0.724023
NA BPP2715 putative membrane proteinchromosome CDS2910611 1188 + 0.715488
NA BPP1719 putative inner membrane efflux proteinchromosome CDS1835278 1500 - 0.722
NA BPP2934 putative exported proteinchromosome CDS3143865 1173 - 0.716113
NA BPP1792 putative transport proteinchromosome CDS1918414 1296 + 0.731481
NA BPP0081 putative aldolasechromosome CDS79103 780 + 0.661538
NA BPP3643 putative citrate lyase beta subunitchromosome CDS3938406 840 - 0.730952
NA BPP1732 putative transmembrane transport proteinchromosome CDS1855565 1158 - 0.712435
NA BPP0583 conserved hypothetical proteinchromosome CDS617070 888 + 0.656532
NA BPP3710 ABC transport protein, Solute-binding componentchromosome CDS4010056 1263 - 0.634996
NA BPP2781 Putative membrane proteinchromosome CDS2980075 1287 + 0.694639
NA BPP3125 putative membrane proteinchromosome CDS3363297 1224 - 0.695261
NA BPP1218 putative membrane proteinchromosome CDS1293441 1203 + 0.694098
NA BPP1650 putative aldolasechromosome CDS1761369 792 + 0.671717
NA BPP0200 putative integral membrane transport proteinchromosome CDS212330 1374 - 0.661572
NA BPP3632 putative membrane proteinchromosome CDS3927395 2103 - 0.675226
NA BPP3269 conserved hypothetical proteinchromosome CDS3526368 885 + 0.745763
NA BPP3867 putative membrane proteinchromosome CDS4184947 1197 + 0.729323
NA BPP2181 Putative membrane proteinchromosome CDS2332633 558 + 0.636201
NA BPP3090 putative exported proteinchromosome CDS3330977 1731 - 0.641826
NA BPP3652 putative isocitrate lyase-family enzymechromosome CDS3947613 864 + 0.715278
NA BPP2035 hypothetical proteinchromosome CDS2174178 894 + 0.697987
NA BPP0118 putative membrane proteinchromosome CDS124389 885 - 0.697175
NA BPP3726 hypothetical proteinchromosome CDS4025721 2226 - 0.691824
NA BPP2119 Putative ABC transport system, solute-binding proteinchromosome CDS2267336 1059 - 0.622285
NA BPP1374 putative membrane proteinchromosome CDS1474978 1293 - 0.676721
NA BPP1599 putative adolasechromosome CDS1705170 747 - 0.713521
NA BPP1119 putative membrane transport proteinchromosome CDS1192038 1467 + 0.691207
NA BPP3519 putative periplasmic solute-binding transport proteinchromosome CDS3805475 1056 + 0.64678
ampG BPP4081 putative integral membrane signal transducer proteinchromosome CDS4414430 1212 - 0.702145
aqpZ BPP1958 aquaporin Zchromosome CDS2095593 711 + 0.691983
bcr BPP3449 putative drug resistance translocasechromosome CDS3727339 1224 + 0.643791
bplL BPP0145 lipopolysaccharide biosynthesis proteinchromosome CDS158539 1875 - 0.648533
citE BPP3513 putative citrate lyasechromosome CDS3798329 888 - 0.627252
citE BPP1572 citrate lyase beta chainchromosome CDS1678978 942 - 0.752654
ectC BPP1890 L-ectoine synthasechromosome CDS2025414 396 + 0.606061
eno BPP3252 enolasechromosome CDS3506918 1287 - 0.643357
fba BPP1192 fructose-bisphosphate aldolasechromosome CDS1270326 1065 + 0.646948
fbp BPP2482 fructose-1,6-bisphosphatasechromosome CDS2659964 1020 - 0.65
gap BPP1165 glyceraldehyde-3-phosphate dehydrogenasechromosome CDS1247221 1011 + 0.648863
glgA BPP2889 glycogen synthasechromosome CDS3095098 1533 + 0.727332
glgB BPP2892 1,4-alpha-glucan branching enzymechromosome CDS3103180 2196 + 0.711293
glgX BPP2893 probable N-terminal region of glycosyl hydrolase (partial)chromosome CDS3105380 1500 + 0.712667
glgX' BPP2895 C-terminal region of a probable glycosyl hydrolase (partial)chromosome CDS3107561 615 - 0.76748
glpR BPP3096 glycerol-3-phosphate regulon repressor proteinchromosome CDS3337113 810 + 0.67037
gpmA BPP0295 phosphoglycerate mutase 1chromosome CDS304890 753 + 0.64409
gpmB BPP2056 probable phosphoglycerate mutase 2chromosome CDS2198876 645 - 0.697674
hmsF BPP2317 putative hemin storage proteinchromosome CDS2461337 2106 - 0.670465
ilvD BPP0429 dihydroxy-acid dehydratasechromosome CDS450654 1860 + 0.687097
ilvD BPP1380 dihydroxy-acid dehydratasechromosome CDS1480494 1713 - 0.726211
ilvD BPP3770 dihydroxy-acid dehydratasechromosome CDS4083194 1785 - 0.651541
ilvD BPP1383 putative dihydroxy-acid dehydratasechromosome CDS1483717 1743 - 0.714286
kpsM BPP2963 putative polysialic acid transport proteinchromosome CDS3183238 771 - 0.649805
kpsT BPP2962 polysialic acid transport ATP-binding proteinchromosome CDS3182504 738 - 0.653117
malQ BPP2897 4-alpha-glucanotransferasechromosome CDS3109248 2019 + 0.778603
mrsA BPP2069 phosphoglucomutase/phosphomannomutasechromosome CDS2214633 1359 + 0.706402
nagZ BPP1764 putative beta-hexosaminidasechromosome CDS1889985 1104 + 0.688406
pgi BPP0799 glucose-6-phosphate isomerasechromosome CDS856785 1566 - 0.706897
pgi BPP2350 putative glucose-6-phosphate isomerasechromosome CDS2507404 1572 + 0.756361
pgk BPP1166 phosphoglycerate kinasechromosome CDS1248265 1278 + 0.697966
pgm BPP2349 phosphoglucomutasechromosome CDS2505967 1428 + 0.72479
pgm BPP0800 phosphoglucomutasechromosome CDS858357 1383 - 0.703543
pmi BPP1621 putative mannose-6-phosphate isomerasechromosome CDS1730178 1119 + 0.697945
ppsA BPP1544 phosphoenolpyruvate synthasechromosome CDS1651273 2364 + 0.65313
prpB BPP3233 probable methylisocitrate lyasechromosome CDS3487220 894 + 0.654362
ptsH BPP1967 phosphocarrier protein HPrchromosome CDS2103890 270 + 0.596296
ptsI BPP1968 phosphoenolpyruvate-protein phosphotransferasechromosome CDS2104281 1695 + 0.699115
pykA BPP3663 pyruvate kinasechromosome CDS3959890 1443 - 0.686071
rfaD BPP3123 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS3361373 990 - 0.653535
rpe BPP4154 ribulose-phosphate 3-epimerasechromosome CDS4488867 738 + 0.670732
rpiA BPP1700 ribose 5-phosphate isomerase achromosome CDS1809664 681 + 0.693098
rpoP BPP4034 nitrogen regulatory IIA proteinchromosome CDS4370574 465 + 0.664516
suhB BPP2277 inositol-1-monophosphatasechromosome CDS2424355 783 + 0.698595
talB BPP1228 transaldolase Bchromosome CDS1308895 963 - 0.703011
tktA BPP1164 transketolase 1chromosome CDS1245167 2037 + 0.688267
tpiA BPP3426 triosephosphate isomerasechromosome CDS3699971 747 - 0.709505
ugpA BPP2945 sn-glycerol-3-phosphate transport system, permease proteinchromosome CDS3155019 882 + 0.647392
ugpB BPP2944 glycerol-3-phosphate-binding periplasmic protein precursorchromosome CDS3153502 1341 + 0.644295
ugpB BPP1902 glycerol-3-phosphate-binding periplasmic protein precursorchromosome CDS2036239 1338 + 0.652466
ugpC BPP2947 sn-glycerol-3-phosphate transport ATP-binding proteinchromosome CDS3156820 1089 + 0.665748
ugpE BPP2946 sn-glycerol-3-phosphate transport system permease proteinchromosome CDS3155920 852 + 0.634977
wbmF BPP0139 nucleotide sugar epimerase/dehydratasechromosome CDS150428 1074 + 0.594972
wbmG BPP0138 nucleotide sugar epimerase/dehydratasechromosome CDS149491 933 + 0.62701
wbmH BPP0137 nucleotide sugar epimerase/dehydratasechromosome CDS148545 942 + 0.611465
wbmL BPP0133 ABC transporter integral membrane proteinchromosome CDS140425 792 + 0.542929
wbmM BPP0132 ABC transporter ATP-binding proteinchromosome CDS139210 1209 + 0.595533
wbmN BPP0131 ABC transporter ATP-binding proteinchromosome CDS138048 1170 + 0.582906
wbpP BPP2956 capsular polysaccharide biosynthesis proteinchromosome CDS3174847 1026 - 0.679337