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2024-05-08 06:05:42

Gene list

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COG category: Carbohydrate transport and metabolism
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 202

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VC0028 dihydroxy-acid dehydratasechromosome I CDS24792 1842 - 0.547231
VC0069 multidrug resistance protein, putativechromosome I CDS69296 1203 + 0.501247
VC0075 MadN proteinchromosome I CDS75266 888 - 0.483108
VC0081 conserved hypothetical proteinchromosome I CDS79052 912 - 0.506579
VC0207 PTS system, sucrose-specific IIBC component, putativechromosome I CDS214449 1449 + 0.518979
VC0239 conserved hypothetical proteinchromosome I CDS243212 1773 - 0.452341
VC0240 ADP-L-glycero-D-mannoheptose-6-epimerasechromosome I CDS245143 945 - 0.461376
VC0242 phosphomannomutasechromosome I CDS247929 1392 + 0.386494
VC0246 lipopolysaccharide/O-antigen transport proteinchromosome I CDS252918 795 + 0.348428
VC0247 lipopolysaccharide/O-antigen transport proteinchromosome I CDS253651 816 + 0.363971
VC0260 mannosyl-transferasechromosome I CDS265374 1866 - 0.435155
VC0262 UDP-glucose 4-epimerasechromosome I CDS267392 972 + 0.450617
VC0269 mannose-6-phosphate isomerasechromosome I CDS274509 1200 + 0.4125
VC0270 ROK family proteinchromosome I CDS275674 981 + 0.442406
VC0285 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolasechromosome I CDS294219 606 - 0.551155
VC0286 gluconate permease, putativechromosome I CDS294837 1377 - 0.547567
VC0287 thermoresistant gluconokinasechromosome I CDS296367 516 + 0.501938
VC0288 phosphogluconate dehydratasechromosome I CDS296819 1857 + 0.542273
VC0302 conserved hypothetical proteinchromosome I CDS309994 1191 + 0.534845
VC0336 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independentchromosome I CDS354684 1533 - 0.510763
VC0337 conserved hypothetical proteinchromosome I CDS356359 942 - 0.524416
VC0374 glucose-6-phosphate isomerasechromosome I CDS389886 1653 + 0.488808
VC0425 hypothetical proteinchromosome I CDS455459 798 + 0.496241
VC0473 transketolase 1chromosome I CDS501605 2085 + 0.534293
VC0476 D-erythrose 4-phosphate dehydrogenasechromosome I CDS506780 1158 + 0.463731
VC0477 phosphoglycerate kinasechromosome I CDS508071 1179 + 0.489398
VC0478 fructose-bisphosphate aldolase, class IIchromosome I CDS509405 1077 + 0.471681
VC0485 pyruvate kinase Ichromosome I CDS514732 1413 - 0.475584
VC0486 transcriptional regulator, DeoR familychromosome I CDS516560 783 + 0.452107
VC0579 phosphoheptose isomerase, putativechromosome I CDS608662 591 - 0.475465
VC0611 phosphoglucomutase/phosphomannomutase, putativechromosome I CDS642814 1413 - 0.491861
VC0612 cellobiose/cellodextrin-phosphorylase, putativechromosome I CDS644349 2406 - 0.504988
VC0613 beta-N-acetylhexosaminidasechromosome I CDS646873 1914 - 0.50209
VC0614 conserved hypothetical proteinchromosome I CDS648783 978 - 0.527607
VC0639 phosphoglucomutase/phosphomannomutase family protein MrsAchromosome I CDS680988 1341 + 0.478002
VC0689 conserved hypothetical proteinchromosome I CDS735892 1800 + 0.508889
VC0692 beta-hexosaminidasechromosome I CDS739874 993 + 0.523666
VC0745 inositol monophosphate family proteinchromosome I CDS798822 867 - 0.478662
VC0798 citrate lyase, beta subunitchromosome I CDS854565 891 + 0.547699
VC0853 conserved hypothetical proteinchromosome I CDS918527 885 - 0.468927
VC0910 PTS system, trehalose-specific IIBC componentchromosome I CDS969788 1437 + 0.499652
VC0911 trehalose-6-phosphate hydrolasechromosome I CDS971304 1689 + 0.470693
VC0964 PTS system, glucose-specific IIA componentchromosome I CDS1029142 510 - 0.454902
VC0965 phosphoenolpyruvate-protein phosphotransferasechromosome I CDS1029760 1722 - 0.461672
VC0966 phosphocarrier protein HPrchromosome I CDS1031615 258 - 0.465116
VC0993 N-acetylglucosamine repressorchromosome I CDS1058502 1215 - 0.469136
VC0994 N-acetylglucosamine-6-phosphate deacetylasechromosome I CDS1059719 1137 - 0.458223
VC0995 PTS system, N-acetylglucosamine-specific IIABC componentchromosome I CDS1061324 1572 + 0.489822
VC1069 glyceraldehyde 3-phosphate dehydrogenasechromosome I CDS1136296 1002 + 0.48004
VC1071 transporter, putativechromosome I CDS1137847 1236 + 0.507282
VC1123 hypothetical proteinchromosome I CDS1191714 540 + 0.488889
VC1129 inosine-guanosine kinasechromosome I CDS1196815 1305 + 0.429119
VC1240 alpha-ribazole-5`-phosphate phosphatase CobC, putativechromosome I CDS1313900 603 + 0.52073
VC1261 conserved hypothetical proteinchromosome I CDS1335279 1215 + 0.485597
VC1281 PTS system, cellobiose-specific IIB componentchromosome I CDS1356926 306 + 0.408497
VC1282 PTS system, cellobiose-specific IIC componentchromosome I CDS1357310 1341 + 0.457122
VC1283 PTS system, cellobiose-specific IIA componentchromosome I CDS1358697 336 + 0.428571
VC1284 6-phospho-beta-glucosidasechromosome I CDS1359014 1323 + 0.464097
VC1325 galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding proteinchromosome I CDS1409080 975 + 0.501538
VC1327 galactoside ABC transporter, ATP-binding proteinchromosome I CDS1410224 1545 + 0.462783
VC1328 galactoside ABC transporter, permease proteinchromosome I CDS1411773 1014 + 0.476331
VC1333 hypothetical proteinchromosome I CDS1416672 552 - 0.485507
VC1336 carboxyphosphonoenolpyruvate phosphonomutasechromosome I CDS1419710 927 + 0.523193
VC1391 multidrug transporter, putativechromosome I CDS1481602 1407 + 0.52452
VC1411 multidrug resistance protein VceBchromosome I CDS1504292 1536 + 0.468099
VC1532 ROK family proteinchromosome I CDS1644672 909 - 0.49725
VC1539 conserved hypothetical proteinchromosome I CDS1650858 867 + 0.448674
VC1549 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding proteinchromosome I CDS1661257 1305 + 0.483525
VC1550 glycerol-3-phosphate ABC transporter, permease proteinchromosome I CDS1662637 882 + 0.510204
VC1551 glycerol-3-phosphate ABC transporter, permease proteinchromosome I CDS1663528 843 + 0.465006
VC1552 glycerol-3-phosphate ABC transporter, ATP-binding proteinchromosome I CDS1664360 1182 + 0.497462
VC1553 glycerol-3-phosphate regulon repressorchromosome I CDS1665566 762 + 0.488189
VC1555 conserved hypothetical proteinchromosome I CDS1667144 513 - 0.512671
VC1558 6-phospho-beta-glucosidasechromosome I CDS1669192 1437 - 0.473208
VC1594 aldose 1-epimerasechromosome I CDS1705924 1053 - 0.51377
VC1595 galactokinasechromosome I CDS1706985 1218 - 0.519704
VC1597 multidrug transporter, putativechromosome I CDS1709719 1434 - 0.490237
VC1618 multidrug resistance protein, putativechromosome I CDS1730964 1218 + 0.498358
VC1632 conserved hypothetical proteinchromosome I CDS1757297 1437 + 0.51009
VC1634 multidrug resistance proteinchromosome I CDS1759459 1206 - 0.515755
VC1656 conserved hypothetical proteinchromosome I CDS1788409 864 - 0.487269
VC1690 alpha-1,6-galactosidase, putativechromosome I CDS1823364 1125 - 0.504889
VC1697 conserved hypothetical proteinchromosome I CDS1830805 831 + 0.494585
VC1726 glycogen synthasechromosome I CDS1863877 1455 - 0.487972
VC1727 glucose-1-phosphate adenylyltransferasechromosome I CDS1865333 1218 - 0.465517
VC1777 conserved hypothetical proteinchromosome I CDS1927130 1284 - 0.453271
VC1778 conserved hypothetical proteinchromosome I CDS1928421 522 - 0.411877
VC1779 C4-dicarboxylate-binding periplasmic proteinchromosome I CDS1928993 966 - 0.44617
VC1781 conserved hypothetical proteinchromosome I CDS1930173 723 + 0.471646
VC1782 ROK family proteinchromosome I CDS1930883 864 + 0.450231
VC1783 N-acetylglucosamine-6-phosphate deacetylasechromosome I CDS1931750 1137 + 0.449428
VC1784 neuraminidasechromosome I CDS1933231 2424 + 0.451733
VC1820 PTS system, fructose-specific IIA componentchromosome I CDS1961098 441 + 0.37415
VC1821 PTS system, fructose-specific IIBC componentchromosome I CDS1961550 1404 + 0.497863
VC1822 PTS system, fructose-specific IIABC componentchromosome I CDS1963028 1866 - 0.495177
VC1823 PTS system, fructose-specific IIB componentchromosome I CDS1965110 300 + 0.493333
VC1824 PTS system, nitrogen regulatory IIA component, putativechromosome I CDS1965418 780 + 0.476923
VC1826 PTS system, fructose-specific IIABC componentchromosome I CDS1967400 1902 + 0.50368
VC1827 mannose-6-phosphate isomerasechromosome I CDS1969417 1167 + 0.461011
VC1897 Hit family proteinchromosome I CDS2043911 351 - 0.478632
VC1912 conserved hypothetical proteinchromosome I CDS2061646 1170 - 0.454701
VC1927 C4-dicarboxylate transport proteinchromosome I CDS2078993 1362 - 0.505874
VC1928 C4-dicarboxylate transport protein DctQ, putativechromosome I CDS2080358 699 - 0.466381
VC1929 C4-dicarboxylate-binding periplasmic proteinchromosome I CDS2081087 999 - 0.487487
VC1966 conserved hypothetical proteinchromosome I CDS2115867 1881 + 0.496013
VC2000 glyceraldehyde 3-phosphate dehydrogenasechromosome I CDS2152265 996 + 0.468875
VC2001 conserved hypothetical proteinchromosome I CDS2153408 891 + 0.491582
VC2007 transcriptional regulator, ROK familychromosome I CDS2159327 1218 - 0.460591
VC2008 pyruvate kinase IIchromosome I CDS2160989 1446 + 0.487552
VC2013 PTS system, glucose-specific IIBC componentchromosome I CDS2166647 1503 - 0.477711
VC2032 hypothetical proteinchromosome I CDS2186633 876 + 0.502283
VC2075 histidine triad family proteinchromosome I CDS2232809 444 + 0.493243
VC2095 phosphoglucomutasechromosome I CDS2256154 1647 - 0.48816
VC2217 beta-N-acetylhexosaminidasechromosome I CDS2371485 2652 - 0.495475
VC2230 phosphoheptose isomerasechromosome I CDS2383272 576 - 0.456597
VC2300 ampG protein, putativechromosome I CDS2454099 1389 + 0.478762
VC2348 phosphopentomutasechromosome I CDS2504399 1221 - 0.505324
VC2447 enolasechromosome I CDS2626616 1302 - 0.480031
VC2480 ribose-5-phosphate isomerasechromosome I CDS2659090 657 + 0.494673
VC2487 conserved hypothetical proteinchromosome I CDS2667410 1089 - 0.431589
VC2531 PTS system, nitrogen regulatory IIA componentchromosome I CDS2713688 447 + 0.469799
VC2533 phosphocarrier protein NPrchromosome I CDS2715016 279 + 0.516129
VC2544 fructose-1,6-bisphosphatasechromosome I CDS2724901 1011 + 0.487636
VC2566 conserved hypothetical proteinchromosome I CDS2748179 810 + 0.516049
VC2625 ribulose-phosphate 3-epimerasechromosome I CDS2796111 711 - 0.507736
VC2670 triosephosphate isomerasechromosome I CDS2837230 798 + 0.507519
VC2688 glpX proteinchromosome I CDS2855699 1008 + 0.529762
VC2689 6-phosphofructokinase, isozyme Ichromosome I CDS2856783 996 - 0.492972
VC2761 multidrug resistance proteinchromosome I CDS2946786 1230 + 0.489431
VCA0013 maltodextrin phosphorylasechromosome II CDS12271 2454 + 0.524857
VCA0014 4-alpha-glucanotransferasechromosome II CDS14810 2181 + 0.520862
VCA0015 hypothetical proteinchromosome II CDS17196 231 + 0.52381
VCA0016 1,4-alpha-glucan branching enzymechromosome II CDS17386 2001 + 0.505747
VCA0083 multidrug resistance protein Dchromosome II CDS93581 1212 + 0.488449
VCA0085 hypothetical proteinchromosome II CDS95459 1203 + 0.466334
VCA0090 conserved hypothetical proteinchromosome II CDS99076 894 - 0.513423
VCA0127 ribose ABC transporter proteinchromosome II CDS141640 471 + 0.471338
VCA0128 ribose ABC transporter, ATP-binding proteinchromosome II CDS142137 1503 + 0.499002
VCA0129 ribose ABC transporter, permease proteinchromosome II CDS143636 999 + 0.503504
VCA0130 ribose ABC transporter, periplasmic D-ribose-binding proteinchromosome II CDS144693 885 + 0.510734
VCA0131 ribokinasechromosome II CDS145716 921 + 0.504886
VCA0137 glycerol-3-phosphate transporterchromosome II CDS151333 1410 - 0.501418
VCA0191 conserved hypothetical proteinchromosome II CDS207097 1485 + 0.515152
VCA0214 multidrug resistance protein Dchromosome II CDS232449 1245 - 0.498795
VCA0241 hexulose-6-phosphate isomerase SgbU, putativechromosome II CDS261638 885 - 0.520904
VCA0242 hexulose-6-phosphate synthase SgbH, putativechromosome II CDS262534 648 - 0.518519
VCA0244 sugar isomerase SgaE, AraD/FucA familychromosome II CDS264014 693 - 0.53824
VCA0245 PTS system, IIA componentchromosome II CDS264715 507 - 0.5286
VCA0246 SgaT proteinchromosome II CDS265319 1761 - 0.510505
VCA0247 transcriptional regulator, DeoR familychromosome II CDS267445 756 + 0.47619
VCA0250 alpha-amylasechromosome II CDS270200 1401 - 0.450393
VCA0267 multidrug resistance protein Dchromosome II CDS283612 1140 + 0.466667
VCA0403 hypothetical proteinchromosome II CDS376324 258 + 0.410853
VCA0408 hypothetical proteinchromosome II CDS379262 348 + 0.373563
VCA0460 hypothetical proteinchromosome II CDS410246 348 + 0.367816
VCA0484 hypothetical proteinchromosome II CDS423604 288 + 0.34375
VCA0516 PTS system, fructose-specific IIBC componentchromosome II CDS445161 1743 - 0.512909
VCA0517 1-phosphofructokinasechromosome II CDS446916 954 - 0.504193
VCA0518 PTS system, fructose-specific IIA/FPR componentchromosome II CDS447880 1203 - 0.503741
VCA0543 conserved hypothetical proteinchromosome II CDS479340 513 + 0.473684
VCA0554 oxalate/formate antiporter, putativechromosome II CDS490884 1233 - 0.49635
VCA0599 hypothetical proteinchromosome II CDS535461 906 - 0.501104
VCA0623 transaldolase Bchromosome II CDS557117 951 + 0.497371
VCA0624 transketolase 1chromosome II CDS558116 2043 + 0.528634
VCA0653 PTS system, sucrose-specific IIBC componentchromosome II CDS587052 1440 - 0.495833
VCA0655 sucrose-6-phosphate dehydrogenasechromosome II CDS589860 1647 + 0.505768
VCA0656 fructokinasechromosome II CDS591628 972 - 0.506173
VCA0669 sugar transporter family proteinchromosome II CDS605452 1296 + 0.468364
VCA0684 regulatory protein UhpCchromosome II CDS620078 1311 + 0.496568
VCA0699 glucose-1-phosphate adenylyltransferasechromosome II CDS637339 1224 + 0.472222
VCA0707 regulatory protein UhpC, putativechromosome II CDS649740 1380 + 0.505072
VCA0708 pyruvate kinase IIchromosome II CDS651241 1461 + 0.516769
VCA0710 periplasmic protein TorTchromosome II CDS655805 1050 + 0.509524
VCA0711 methylglyoxal synthasechromosome II CDS656909 456 + 0.491228
VCA0737 luxP proteinchromosome II CDS683063 1095 - 0.46484
VCA0753 conserved hypothetical proteinchromosome II CDS697461 1155 + 0.510823
VCA0801 inosine-guanosine kinasechromosome II CDS741911 1305 + 0.489655
VCA0835 conserved hypothetical proteinchromosome II CDS780082 987 - 0.513678
VCA0843 glyceraldehyde 3-phosphate dehydrogenasechromosome II CDS785728 1530 + 0.490196
VCA0860 alpha-amylasechromosome II CDS809269 2073 + 0.51809
VCA0896 glucose-6-phosphate 1-dehydrogenasechromosome II CDS850221 1506 + 0.504648
VCA0897 devB proteinchromosome II CDS851723 717 + 0.51325
VCA0898 6-phosphogluconate dehydrogenase, decarboxylatingchromosome II CDS852453 1449 + 0.505866
VCA0903 conserved hypothetical proteinchromosome II CDS857004 1134 - 0.528219
VCA0904 permeasechromosome II CDS858156 1353 - 0.495196
VCA0935 hypothetical proteinchromosome II CDS886850 357 + 0.439776
VCA0940 transcriptional regulator, DeoR familychromosome II CDS891370 762 + 0.480315
VCA0943 maltose ABC transporter, permease proteinchromosome II CDS893457 891 - 0.493827
VCA0944 maltose ABC transporter, permease proteinchromosome II CDS894359 1575 - 0.481905
VCA0945 maltose ABC transporter, periplasmic maltose-binding proteinchromosome II CDS896008 1221 - 0.472563
VCA0946 maltose/maltodextrin ABC transporter, ATP-binding proteinchromosome II CDS897862 1122 + 0.501783
VCA0963 hypothetical proteinchromosome II CDS912325 924 - 0.463203
VCA0972 conserved hypothetical proteinchromosome II CDS918331 1305 - 0.465134
VCA0987 phosphoenolpyruvate synthasechromosome II CDS938085 2412 + 0.519071
VCA1010 conserved hypothetical proteinchromosome II CDS960337 897 + 0.529543
VCA1025 glucosamine-6-phosphate isomerasechromosome II CDS972427 801 + 0.459426
VCA1028 maltoporinchromosome II CDS975709 1251 - 0.440448
VCA1029 glycogen operon protein GlgXchromosome II CDS977379 1971 + 0.472856
VCA1033 extracellular solute-binding protein, putativechromosome II CDS982617 1377 - 0.485839
VCA1041 phosphomannomutase, putativechromosome II CDS991281 1704 + 0.540493
VCA1045 PTS system, mannitol-specific IIABC componentchromosome II CDS994881 1950 + 0.491282
VCA1046 mannitol-1-phosphate 5-dehydrogenasechromosome II CDS996931 1155 + 0.493506