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2024-05-28 02:20:45

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Pseudomonas syringae pv. tomato str. DC3000, DC3000

Number of genes found: 82

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Pseudomonas syringae pv. tomato str. DC3000, DC3000
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PSPTO3750 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4237660 624 - 0.586538
NA PSPTO1743 hydrolase, Atz/Trz familySubName: Full=Hydrolase, Atz/Trz family; chromosome CDS1910654 1332 - 0.62988
NA PSPTO3459 CTP synthase domain proteinSubName: Full=CTP synthase domain protein; chromosome CDS3901204 735 - 0.636735
NA PSPTO2063 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2243781 729 + 0.56653
NA PSPTO0600 HIT family proteinSubName: Full=HIT family protein; chromosome CDS657771 339 - 0.554572
NA PSPTO4123 purine nucleoside permease, putativeSubName: Full=Purine nucleoside permease, putative; chromosome CDS4647679 1032 + 0.619186
NA PSPTO3273 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3698579 501 + 0.586826
NA PSPTO5171 Atz/Trz family proteinSubName: Full=Atz/Trz family protein; chromosome CDS5887357 1365 - 0.63663
NA PSPTO2284 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS2525232 1542 - 0.580415
NA PSPTO4157 dihydroorotase, homodimeric typeRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS4684726 1044 + 0.618774
NA PSPTO2670 mutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome CDS2966404 564 - 0.599291
NA PSPTO3506 phosphorylase, family 2RecName: Full=Probable S-methyl-5-thioinosine phosphorylase; EC=2.4.2.44; AltName: Full=5-methylthioinosine phosphorylase; Short=MTI phosphorylase; Short=MTIP; chromosome CDS3958536 741 - 0.62753
NA PSPTO1462 mutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome CDS1609228 552 - 0.588768
NA PSPTO1871 cytosine/purine/uracil/thiamine/allantoin permease family proteinSubName: Full=Cytosine/purine/uracil/thiamine/allantoin permease family protein; chromosome CDS2045768 1452 - 0.615014
NA PSPTO4144 deoxycytidine triphosphate deaminase, putativeRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS4671393 567 - 0.574956
NA PSPTO2331 deoxyguanosinetriphosphate triphosphohydrolase, putativeSubName: Full=Deoxyguanosinetriphosphate triphosphohydrolase, putative; chromosome CDS2586250 1332 - 0.631381
NA PSPTO1457 cytidine/deoxycytidylate deaminase family proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS1602041 510 + 0.639216
NA PSPTO0318 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS345431 321 - 0.557632
NA PSPTO0439 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS483226 1389 + 0.645788
NA PSPTO0935 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1013292 1134 + 0.62522
NA PSPTO3668 allantoicaseRecName: Full=Probable allantoicase; EC=3.5.3.4; AltName: Full=Allantoate amidinohydrolase; chromosome CDS4136051 996 + 0.60743
NA PSPTO1615 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1770750 873 + 0.486827
NA PSPTO3660 xanthine dehydrogenase, N-terminal subunitSubName: Full=Xanthine dehydrogenase, N-terminal subunit; chromosome CDS4126521 1455 + 0.6
NA PSPTO4795 AMP nucleosidaseSubName: Full=AMP nucleosidase; chromosome CDS5434554 1464 - 0.629781
NA PSPTO2373 inosine/uridine-preferring nucleoside hydrolaseSubName: Full=Inosine/uridine-preferring nucleoside hydrolase; chromosome CDS2624219 1026 + 0.599415
NA PSPTO5041 dihydroorotase, multifunctional complex typeRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS5741873 1272 + 0.654874
NA PSPTO2474 DNA/RNA non-specific endonucleaseSubName: Full=DNA/RNA non-specific endonuclease; chromosome CDS2732375 951 - 0.596215
NA PSPTO0933 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1011024 999 + 0.600601
NA PSPTO3661 xanthine dehydrogenase, C-terminal subunitSubName: Full=Xanthine dehydrogenase, C-terminal subunit; chromosome CDS4127968 2379 + 0.603615
NA PSPTO0772 xanthine/uracil permease family proteinSubName: Full=Xanthine/uracil permease family protein; chromosome CDS821385 1398 - 0.606581
NA PSPTO5051 Ham1 proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS5750148 594 + 0.661616
NA PSPTO4975 cytosine/purine/uracil/thiamine/allantoin permease family proteinSubName: Full=Cytosine/purine/uracil/thiamine/allantoin permease family protein; chromosome CDS5645168 1290 - 0.62093
NA PSPTO3986 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4491494 432 - 0.56713
add PSPTO0757 adenosine deaminaseRecName: Full=Adenine deaminase; Short=ADE; EC=3.5.4.2; AltName: Full=Adenine aminohydrolase; Short=AAH; chromosome CDS804854 954 - 0.600629
adk PSPTO1509 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1668011 648 + 0.583333
allA PSPTO3669 ureidoglycolate hydrolaseRecName: Full=Ureidoglycolate lyase; EC=4.3.2.3; AltName: Full=Ureidoglycolatase; chromosome CDS4137185 513 + 0.582846
apt PSPTO1990 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS2175076 549 - 0.564663
atzB PSPTO0765 hydroxydechloroatrazine ethylaminohydrolaseSubName: Full=Hydroxydechloroatrazine ethylaminohydrolase; chromosome CDS813434 1356 - 0.620944
carA PSPTO4502 carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS5072095 1137 - 0.58927
carB PSPTO4501 carbamoyl-phosphate synthase, large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS5068738 3222 - 0.595593
cdd PSPTO1602 cytosine deaminaseSubName: Full=Cytosine deaminase; chromosome CDS1758068 438 + 0.577626
cmk PSPTO1749 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS1920306 690 + 0.594203
cyaA PSPTO0230 adenylate cyclase, class ISubName: Full=Adenylate cyclase, class I; chromosome CDS249596 2847 - 0.600632
deoC PSPTO0973 deoxyribose-phosphate aldolaseSubName: Full=Deoxyribose-phosphate aldolase; chromosome CDS1058084 780 + 0.624359
dut PSPTO0084 deoxyuridine 5'triphosphate nucleotidohydrolaseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS106375 456 - 0.614035
gmk PSPTO0075 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS97382 645 - 0.587597
guaA PSPTO1450 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS1589700 1578 + 0.602662
guaD PSPTO3663 guanine aminohydrolaseSubName: Full=Guanine aminohydrolase; chromosome CDS4131205 1314 + 0.605023
hpt PSPTO1131 hypoxanthine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; chromosome CDS1243387 558 + 0.594982
ndk PSPTO1430 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1568159 426 + 0.556338
nrdA PSPTO1671 ribonucleoside-diphosphate reductase, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS1840004 2913 - 0.614143
nrdB PSPTO1661 ribonucleoside-diphosphate reductase, beta subunitRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS1830031 1248 - 0.580929
pcaB PSPTO2341 3-carboxy-cis,cis-muconate cycloisomeraseSubName: Full=3-carboxy-cis,cis-muconate cycloisomerase; chromosome CDS2594472 1362 + 0.649046
ppx PSPTO5249 exopolyphosphataseSubName: Full=Exopolyphosphatase; chromosome CDS5967782 1503 + 0.60346
prsA PSPTO1104 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS1218509 942 - 0.549894
purA PSPTO4937 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS5595509 1293 - 0.591647
purB PSPTO3360 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; chromosome CDS3797825 1371 + 0.586433
purC PSPTO3950 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS4458800 711 - 0.559775
purD PSPTO4867 phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS5512819 1296 + 0.60108
purE PSPTO5494 phosphoribosylaminoimidazole carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS6260019 507 - 0.613412
purF PSPTO3811 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS4318919 1509 - 0.587144
purH PSPTO4866 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS5511016 1605 + 0.618069
purK PSPTO5493 phosphoribosylaminoimidazole carboxylase, ATPase subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase, ATPase subunit; chromosome CDS6258927 1083 - 0.605725
purL PSPTO1459 phosphoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS1604253 3897 + 0.609956
purM PSPTO1700 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS1869790 1059 - 0.619452
purN PSPTO1699 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase; chromosome CDS1869140 651 - 0.617512
purT PSPTO1468 phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS1612530 1182 + 0.622673
purU-1 PSPTO0456 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome CDS499114 858 - 0.587413
purU-2 PSPTO2454 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome CDS2710939 867 - 0.569781
purU-3 PSPTO4314 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome CDS4864702 852 - 0.579812
pyrB PSPTO5040 aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS5740872 1005 + 0.620896
pyrD PSPTO2309 dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS2556168 1032 + 0.621124
pyrE PSPTO0080 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS101265 642 + 0.607477
pyrF PSPTO2028 orotidine 5-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS2215104 639 + 0.635368
pyrG PSPTO1552 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS1714734 1632 + 0.596814
pyrH PSPTO1536 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS1695560 744 + 0.573925
pyrR PSPTO5039 pyrimidine operon regulatory protein PyrRRecName: Full=Bifunctional protein PyrR; Includes: RecName: Full=Pyrimidine operon regulatory protein; Includes: RecName: Full=Uracil phosphoribosyltransferase; Short=UPRTase; EC=2.4.2.9; chromosome CDS5740347 513 + 0.631579
thyA PSPTO5282 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS6006968 972 - 0.605967
tmk PSPTO3827 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS4335222 633 - 0.636651
upp PSPTO1130 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS1242541 639 - 0.605634
uraA PSPTO1129 uracil transporterSubName: Full=Uracil transporter; chromosome CDS1241259 1221 - 0.601147
xpt PSPTO0112 xanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; Short=XPRTase; EC=2.4.2.22; chromosome CDS131808 570 - 0.585965