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2024-05-18 23:31:18

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Chromobacterium violaceum ATCC 12472, ATCC 12472

Number of genes found: 76

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Chromobacterium violaceum ATCC 12472, ATCC 12472
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CV3083 probable UDP-sugar diphosphataseSubName: Full=Probable UDP-sugar diphosphatase; EC=3.1.3.5; EC=3.6.1.45; chromosome CDS3358368 1701 - 0.656085
NA CV0278 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS285857 552 + 0.733696
NA CV2123 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS2311818 270 - 0.611111
NA CV0926 conserved hypothetical proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS960524 594 + 0.69697
NA CV2922 probable GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS3202077 951 - 0.643533
NA CV4243 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS4580320 402 + 0.711443
NA CV0622 probable HIT family proteinSubName: Full=Probable HIT family protein; chromosome CDS654507 324 + 0.660494
NA CV3887 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS4194515 627 - 0.657097
NA CV1400 probable 5'-methylthioadenosine phosphorylaseRecName: Full=S-methyl-5-thioadenosine phosphorylase; EC=2.4.2.28; AltName: Full=5-methylthioadenosine phosphorylase; chromosome CDS1474831 909 - 0.684268
NA CV0578 probable guanine deaminaseSubName: Full=Probable guanine deaminase; EC=3.5.4.3; chromosome CDS618498 1317 + 0.681853
NA CV0127 probable Cytidine deaminaseSubName: Full=Probable Cytidine deaminase; EC=3.5.4.5; chromosome CDS139762 1500 + 0.355333
NA CV0033 probable ribose-phosphate diphosphokinaseSubName: Full=Probable ribose-phosphate diphosphokinase; EC=2.7.6.1; chromosome CDS40910 813 + 0.722017
NA CV3894 probable purine-nucleoside phosphorylaseRecName: Full=Probable S-methyl-5-thioinosine phosphorylase; EC=2.4.2.44; AltName: Full=5-methylthioinosine phosphorylase; chromosome CDS4203047 726 - 0.672176
NA CV2040 probable sodium-dependent nucleoside transporterSubName: Full=Probable sodium-dependent nucleoside transporter; chromosome CDS2224314 1302 - 0.667435
NA CV3746 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS4044634 699 - 0.718169
NA CV0032 probable MutT/nudix family proteinSubName: Full=Probable MutT/nudix family protein; chromosome CDS40046 762 - 0.664042
NA CV0510 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS536653 450 + 0.542222
NA CV2894 probable endoglucanase-related proteinSubName: Full=Probable endoglucanase-related protein; chromosome CDS3170223 1689 - 0.685613
NA CV3471 probable cytidine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS3765060 735 + 0.730612
NA CV1032 probable atrazine chlorohydrolaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine deaminase; Short=MTA/SAH deaminase; EC=3.5.4.28; EC=3.5.4.31; chromosome CDS1075739 1320 - 0.662121
NA CV1202 probable ribonuclease precursorSubName: Full=Probable ribonuclease; chromosome CDS1265663 444 - 0.666667
adk CV3343 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS3641481 657 - 0.678843
apt CV3772 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS4070454 582 + 0.61512
carA CV3804 carbomyl phosphate synthetase small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS4102380 1128 - 0.653369
carB CV3802 carbamoyl-phosphate synthase large chainRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS4098429 3210 - 0.659502
cdd CV2570 cytidine deaminaseSubName: Full=Cytidine deaminase; EC=3.5.4.5; chromosome CDS2772463 501 + 0.644711
cmk CV3047 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS3324795 669 - 0.662182
codB CV2572 purine cytosine permease-like proteinSubName: Full=Purine cytosine permease-like protein; chromosome CDS2774370 1347 - 0.694878
cpdB CV0292 2`,3`-cyclic-nucleotide 2`-phosphodiesteraseSubName: Full=2`,3`-cyclic-nucleotide 2`-phosphodiesterase; EC=3.1.4.16; chromosome CDS295163 1905 + 0.670341
dcd CV3554 deoxycytidine triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS3863390 573 + 0.619546
deoA CV3700 thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome CDS3998773 1326 - 0.682504
deoC CV3701 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS4000211 768 - 0.677083
deoD CV3698 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS3996735 711 - 0.648383
dgk CV1634 deoxyguanosine kinaseSubName: Full=Deoxyguanosine kinase; EC=2.7.1.113; chromosome CDS1772110 636 + 0.633648
dgt CV3210 dGTPaseSubName: Full=dGTPase; EC=3.1.5.1; chromosome CDS3491310 1350 + 0.653333
dut CV3081 dUTP diphosphataseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS3356811 453 + 0.686534
gmk CV3770 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS4068276 633 - 0.671406
guaA CV3465 GMP synthetaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS3759515 1578 + 0.643219
hpT CV3900 hypoxanthine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; EC=2.4.2.8; chromosome CDS4210158 543 - 0.644567
ndk CV3542 nucleoside-diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS3850603 426 - 0.589202
nrdA CV2287 ribonucleoside-diphosphate reductase systemRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS2471817 2919 - 0.642343
nrdB CV2284 ribonucleoside-diphosphate reductase systemRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS2469359 1083 - 0.587258
nrdD CV2412 ribonucleoside-triphosphate reductaseSubName: Full=Ribonucleoside-triphosphate reductase; EC=1.17.4.2; chromosome CDS2597622 2139 + 0.637214
nrdE CV1446 ribonucleotide reductase systemSubName: Full=Ribonucleotide reductase system; EC=1.17.4.1; chromosome CDS1529328 2853 - 0.678584
nupC CV1931 nucleoside permeaseSubName: Full=Nucleoside permease; chromosome CDS2099949 1191 - 0.608732
ppx CV1262 exopolyphosphataseSubName: Full=Exopolyphosphatase; EC=3.6.1.11; chromosome CDS1325869 1494 + 0.675368
prsA CV4058 ribose-phosphate diphosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS4388195 984 - 0.629065
purA1 CV0697 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase 1; Short=AMPSase 1; Short=AdSS 1; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase 1; chromosome CDS723216 1299 + 0.735951
purA2 CV3528 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase 2; Short=AMPSase 2; Short=AdSS 2; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase 2; chromosome CDS3835680 1296 - 0.653549
purB CV3834 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS4132018 1371 + 0.635303
purC CV0165 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS174455 855 + 0.676023
purD CV0547 phosphoribosylamine-glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS585721 1278 + 0.673709
purE CV0161 phosphoribosylaminoimidazole carboxylase catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS171663 489 + 0.678937
purF CV2515 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS2707531 1530 - 0.649673
purH CV0546 phosphoribosylaminoimidazolecarboxamideformyltransferaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS584013 1578 + 0.679341
purK CV0162 phosphoribosylaminoimidazole carboxylase ATPase subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase ATPase subunit; EC=4.1.1.21; chromosome CDS172151 1131 + 0.70557
purL CV2044 phophoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS2229619 3960 - 0.673485
purM CV3615 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS3920022 1038 + 0.665703
purN CV3616 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS3921189 642 + 0.697819
purU CV1926 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; EC=3.5.1.10; chromosome CDS2096121 870 + 0.613793
pydA CV3551 dihydroorotate oxidaseSubName: Full=Dihydroorotate oxidase; EC=1.3.3.1; chromosome CDS3859540 951 - 0.683491
pyrB CV0369 aspartate carbamoyltransferase catalytic chainRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS386113 909 + 0.664466
pyrC CV4330 dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS4671861 1086 - 0.685083
pyrD CV1812 dihydroorotate oxidaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS1969826 1035 - 0.658937
pyrE CV4248 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS4584954 645 + 0.652713
pyrF CV3042 orotidine 5`-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS3320236 744 - 0.694892
pyrG CV3457 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS3752408 1641 + 0.638635
pyrH CV2198 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS2369197 720 + 0.618056
pyrI CV0370 aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome CDS387046 459 + 0.527233
tdk CV2342 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS2528359 555 - 0.621622
thyA CV1027 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS1072637 795 + 0.63522
tmk CV3723 dTMP kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS4021506 639 - 0.72144
udk CV1085 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS1133813 615 - 0.63252
upp CV3621 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS3926262 633 + 0.633491
uraA CV3624 uracil permeaseSubName: Full=Uracil permease; chromosome CDS3928132 1242 + 0.669887
ushA CV1743 UDP-sugar diphosphataseSubName: Full=UDP-sugar diphosphatase; EC=3.1.3.5; EC=3.6.1.45; chromosome CDS1893491 1647 + 0.660595