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2024-05-18 10:08:13

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Pseudoalteromonas haloplanktis TAC125, TAC125

Number of genes found: 62

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Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PSHAa2068 TRNA-(MS[2]IO[6]A)-hydroxylaseSubName: Full=TRNA-(MS[2]IO[6]A)-hydroxylase; EC=1.-.-.-; chromosome I CDS2188167 768 - 0.389323
NA PSHAa1463 conserved protein of unknown functionSubName: Full=Uncharacterized protein; chromosome I CDS1541787 462 + 0.350649
NA PSHAa1560 conserved protein of unknown functionSubName: Full=Uncharacterized protein; chromosome I CDS1625102 573 - 0.387435
NA PSHAb0454 conserved protein of unknown functionSubName: Full=Putative uncharacterized protein; chromosome II CDS513908 429 + 0.365967
NA PSHAa2167 putative esteraseSubName: Full=Putative esterase; chromosome I CDS2301308 2733 + 0.40139
NA PSHAa0617 putative orphan proteinSubName: Full=Putative orphan protein; chromosome I CDS640575 228 - 0.315789
NA PSHAa1943 putative Adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase 2; Short=AMPSase 2; Short=AdSS 2; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase 2; chromosome I CDS2051278 1257 + 0.448687
NA PSHAa1615 conserved protein of unknown functionSubName: Full=Uncharacterized protein; chromosome I CDS1678513 435 - 0.354023
NA PSHAb0207 putative nucleoside transport proteinSubName: Full=Putative nucleoside transport protein; chromosome II CDS243425 1722 + 0.417538
NA PSHAa0214 putative sugar-phosphate aldolaseSubName: Full=Putative sugar-phosphate aldolase; chromosome I CDS222904 747 + 0.414993
NA PSHAa2385 putative HIT family hydrolaseSubName: Full=Putative HIT family hydrolase; chromosome I CDS2533955 402 - 0.430348
NA PSHAa1520 putative orphan proteinSubName: Full=Putative orphan protein; chromosome I CDS1589971 324 - 0.472222
add PSHAa0102 adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome I CDS106040 1002 + 0.408184
adk PSHAa1208 adenylate kinase(ATP-AMP transphosphorylase)RecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome I CDS1254422 645 + 0.417054
apt PSHAa1200 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome I CDS1245096 546 + 0.399267
carA PSHAa1228 carbamoyl phosphate synthetase, glutamine amidotransferase small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome I CDS1276213 1098 + 0.439891
carB PSHAa1229 carbamoyl phosphate synthase, large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome I CDS1277327 3219 + 0.436782
cdd PSHAb0315 putative cytidine/deoxycytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome II CDS365629 930 + 0.430108
cmk PSHAa1424 cytidine monophosphate (CMP) kinase; belong to the ubiquitous class of nucleotide kinasesRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; chromosome I CDS1499541 711 + 0.445851
dcd PSHAa1319 2'-deoxycytidine 5'-triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome I CDS1374062 585 + 0.413675
deoD PSHAb0082 Purine nucleoside phosphorylase (Inosine phosphorylase) (PNP)RecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome II CDS94393 702 + 0.41453
dgt PSHAb0109 Deoxyguanosinetriphosphate triphosphohydrolase (dGTPase) (dGTP triphosphohydrolase)SubName: Full=Deoxyguanosinetriphosphate triphosphohydrolase (DGTPase) (DGTP triphosphohydrolase); EC=3.1.5.1; chromosome II CDS130759 1464 - 0.416667
dgt PSHAa1274 putative deoxyguanosinetriphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome I CDS1332258 1293 - 0.434648
gmk PSHAa2790 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome I CDS2968397 621 + 0.389694
gppA PSHAa0115 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (Guanosine pentaphosphate phosphohydrolase) (pppGpp-5'-phosphohydrolase)RecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome I CDS122098 1428 + 0.403361
guaA PSHAa0649 GMP synthetase (glutamine aminotransferase)RecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome I CDS672157 1578 + 0.429024
hit PSHAa2917 member of HIT (histidine triad) family that contains Ap3A and Ap4A hydrolasesSubName: Full=Member of HIT (Histidine triad) family that contains Ap3A and Ap4A hydrolases; chromosome I CDS3086702 372 + 0.389785
mtnN PSHAa0547 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; MtnNRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome I CDS561359 708 - 0.413842
ndk PSHAb0142 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome II CDS176632 432 - 0.462963
nrdA PSHAa1418 ribonucleoside diphosphate reductase 1, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome I CDS1489789 2283 - 0.416119
nrdB PSHAa1417 ribonucleoside-diphosphate reductase 1, beta subunitSubName: Full=Ribonucleoside-diphosphate reductase 1, beta subunit; EC=1.17.4.1; chromosome I CDS1488591 1080 - 0.386111
nupX PSHAb0079 putative Na+ dependent nucleoside transporterSubName: Full=Putative Na+ dependent nucleoside transporter; chromosome II CDS91100 1224 - 0.419118
prs PSHAa1054 phosphoribosylpyrophosphate synthetaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome I CDS1091267 948 - 0.418776
purA PSHAa0275 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase 1; Short=AMPSase 1; Short=AdSS 1; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase 1; chromosome I CDS289024 1314 + 0.423896
purB PSHAa1692 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome I CDS1768432 1371 + 0.404814
purC PSHAa0454 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome I CDS473249 1104 + 0.401268
purD PSHAa0343 phosphoribosylglycinamide synthetase (GAR synthetase)RecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome I CDS355015 1290 - 0.45969
purE PSHAa1573 phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome I CDS1639688 483 - 0.438923
purF PSHAa2070 amidophosphoribosyltransferase (PRPP amidotransferase)RecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome I CDS2189851 1527 - 0.40406
purH PSHAa0345 bifunctional purine biosynthesis protein purH[Includes:IMP cyclohydrolase (Inosinicase) (IMP synthetase) (ATIC);PhosphoribosylaminoimidazolecarboxamidRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome I CDS357249 1587 - 0.444234
purK PSHAa1572 phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit; EC=4.1.1.21; chromosome I CDS1638537 1149 - 0.421236
purL PSHAa2330 Phophoribosylformylglycinamidine synthase (FGAM synthetase)RecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome I CDS2471400 3891 - 0.444359
purM PSHAa1947 phosphoribosylaminoimidazole synthetase (AIR synthetase)RecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome I CDS2055361 1053 + 0.450142
purN PSHAa1948 phosphoribosylglycinamide formyltransferase 1SubName: Full=Phosphoribosylglycinamide formyltransferase 1; EC=2.1.2.2; chromosome I CDS2056413 648 + 0.427469
purU PSHAa0701 formyltetrahydrofolate hydrolaseSubName: Full=Formyltetrahydrofolate hydrolase; EC=3.5.1.10; chromosome I CDS729906 831 - 0.391095
pyrB PSHAa2254 aspartate transcarbamoylaseSubName: Full=Aspartate transcarbamoylase; EC=2.1.3.2; chromosome I CDS2391608 1017 + 0.435595
pyrC PSHAa1183 dihydro-orotase, DHOaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome I CDS1231537 1053 + 0.401709
pyrD PSHAa1669 dihydro-orotate oxidase, FMN-linkedRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome I CDS1739803 1011 - 0.397626
pyrE PSHAa2787 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome I CDS2965880 645 - 0.39845
pyrF PSHAa1429 orotidine-5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome I CDS1503854 705 + 0.401418
pyrG PSHAa0741 CTP synthetaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome I CDS775455 1635 + 0.409786
pyrH PSHAa2034 uridylate kinase; belongs to the aspartate/carbamate kinase family; hexamerRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome I CDS2149206 750 - 0.412
pyrP PSHAb0378 Uracil permease (Uracil transporter)SubName: Full=Uracil permease (Uracil transporter); chromosome II CDS443893 1191 + 0.40806
rdgB PSHAa2608 putative inosine/xanthosine triphosphataseRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; chromosome I CDS2751859 540 + 0.466667
tadA PSHAa2333 tRNA-specific adenosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome I CDS2477274 507 - 0.424063
tdk PSHAb0294 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome II CDS344417 585 + 0.430769
thyA PSHAa0749 thymidylate synthetaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome I CDS784513 852 + 0.429577
tmk PSHAa1803 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome I CDS1893014 627 - 0.409888
udk PSHAb0080 Uridine kinase (Uridine monophosphokinase) (Cytidine monophosphokinase)RecName: Full=Uridine kinase; EC=2.7.1.48; chromosome II CDS92341 630 - 0.380952
udp PSHAb0316 putative uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome II CDS366589 759 - 0.438735
upp PSHAb0377 Uracil phosphoribosyltransferase (UMP pyrophosphorylase) (UPRTase)RecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome II CDS443188 630 + 0.396825
ushA PSHAb0345 Protein ushA precursor [Includes: UDP-sugar hydrolase (UDP-sugar diphosphatase) (UDP-sugar pyrophosphatase); 5'-nucleotidase (5'-NT)]SubName: Full=Protein ushA; EC=3.1.3.5; EC=3.6.1.45; chromosome II CDS401654 1617 - 0.408163