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2024-04-29 07:13:04

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Lactobacillus sakei subsp. sakei 23K, 23K

Number of genes found: 78

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus sakei subsp. sakei 23K, 23K
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LSA0446 Putative dihydroorotate oxidase, catalytic subunitchromosome CDS460281 942 + 0.403397
NA LSA0055 Putative thiamine/thiamine precursor:cation symporterchromosome CDS51132 1167 - 0.425021
NA LSA0013 Putative nucleobase: cation symporterchromosome CDS15068 1341 - 0.448173
NA LSA1212 Cytosine deaminase, (N-terminal fragment), authentic frameshiftchromosome CDS1195067 885 + 0.442938
NA LSA1481 Hypothetical proteinchromosome CDS1457504 471 + 0.437367
NA LSA0628 Putative diadenosine polyphosphate hydrolasechromosome CDS631277 429 - 0.433566
NA LSA0287 Pyrimidine-specific nucleoside symporterchromosome CDS284050 1236 + 0.391586
NA LSA1070 Putative bacterial type II secretion/competence system, DCMP deaminase ComEB-likechromosome CDS1066113 489 - 0.404908
NA LSA1211 Putative cytosine:cation symporter (N-terminal fragment), authentic frameshitchromosome CDS1194104 753 - 0.446215
NA LSA0335 Putative cytidine deaminasechromosome CDS339299 519 + 0.458574
NA LSA0798 Pyrimidine-specific nucleoside symporterchromosome CDS789448 1230 + 0.388618
NA LSA1651 Putative purine phosphoribosyltransferase, PRT familychromosome CDS1635725 837 - 0.414576
NA LSA0259 Pyrimidine-specific nucleoside symporterchromosome CDS254195 1191 + 0.353484
NA LSA1168 Putative nucleoside deoxyribosyltransferasechromosome CDS1153869 480 + 0.404167
NA LSA1210 Putative cytosine:cation symporter (C-terminal fragment), authentic frameshiftchromosome CDS1193498 591 - 0.416244
NA LSA0430 Putative nucleotide phosphoesterasechromosome CDS438277 1380 + 0.444928
NA LSA1847 Hypothetical integral membrane proteinchromosome CDS1837627 561 - 0.360071
NA LSA0508 Putative nucleoside deoxyribosyltransferasechromosome CDS527101 471 + 0.416136
NA LSA1213 Cytosine deaminase (C-terminal fragment), authentic frameshiftchromosome CDS1195963 339 + 0.445428
NA LSA0023 Putative ribonucleotide reductase (NrdI-like)chromosome CDS23990 468 - 0.438034
NA LSA0931 Hypothetical integral membrane proteinchromosome CDS920172 747 + 0.386881
add LSA0086 Adenosine deaminasechromosome CDS81314 1020 - 0.435294
adeC1 LSA0088 Adenine deaminasechromosome CDS83856 1785 + 0.452101
adeC2 LSA1670 Adenine deaminasechromosome CDS1652877 1743 + 0.468158
adk LSA1744 Adenylate kinase (ATP-AMP transphosphorylase)chromosome CDS1726385 657 - 0.406393
apt LSA1276 Adenine phosphoribosyltransferase (APRT)chromosome CDS1257177 519 - 0.423892
cmk LSA1018 Cytidylate kinasechromosome CDS1008969 660 - 0.410606
deoC LSA0795 2 Deoxyribose-5 phosphate aldolasechromosome CDS786849 651 + 0.403994
deoD LSA0797 Purine-nucleoside phosphorylasechromosome CDS788722 705 + 0.407092
dgk LSA1805 Deoxyguanosine kinasechromosome CDS1795853 663 + 0.386124
dut LSA1684 Deoxyuridine 5'-triphosphatasechromosome CDS1665556 540 - 0.414815
fhs LSA0947 Formate-tetrahydrofolate ligase (Formyltetrahydrofolate synthetase)chromosome CDS933463 1674 + 0.45221
gmk1 LSA0107 Guanylate kinasechromosome CDS102240 561 + 0.420677
gmk2 LSA0685 Guanylate kinasechromosome CDS682257 612 + 0.405229
guaA LSA0139 Guanosine monophosphate synthase (Glutamine amidotransferase)chromosome CDS132817 1554 + 0.425354
guaC LSA0476 Guanosine 5'-monophosphate reductase (GMP reductase)chromosome CDS492944 978 - 0.433538
hpt LSA1598 Hypoxanthine phosphoribosyltranferasechromosome CDS1583430 546 - 0.395604
iunH1 LSA0252 Inosine-uridine preferring nucleoside hydrolasechromosome CDS247214 936 + 0.446581
iunH2 LSA0533 Inosine-uridine preferring nucleoside hydrolasechromosome CDS551808 960 + 0.446875
iunH3 LSA0830 Inosine-uridine preferring nucleoside hydrolasechromosome CDS818364 975 - 0.457436
nrdD LSA1459 Anaerobic ribonucleoside-triphosphate reductasechromosome CDS1432875 2217 - 0.40415
nrdE LSA0941 Ribonucleoside-diphosphate reductase, alpha chainchromosome CDS927727 2172 - 0.404696
nrdF LSA0940 Ribonucleoside-diphosphate reductase, beta chainchromosome CDS926347 957 - 0.37931
pdp LSA0801 Pyrimidine-nucleoside phosphorylasechromosome CDS792975 1299 + 0.423403
pfs LSA0776 Methylthioadenosine nucleosidase (nucleoside phosphorylase)chromosome CDS771701 693 + 0.428571
prs LSA1646 Ribose-phosphate diphosphokinase (Phosphoribosyl pyrophosphate synthetase)chromosome CDS1631162 972 - 0.393004
purA LSA0063 Adenylosuccinate synthetase (IMP-aspartate ligase)chromosome CDS59513 1281 + 0.416081
purB1 LSA0654 Adenylosuccinate lyasechromosome CDS658095 1296 + 0.424383
purB2 LSA1555 Adenylosuccinate lyasechromosome CDS1528041 1293 - 0.434648
purC LSA0655 Phospho ribosylaminoimidazole-succinocarboxamide synthasechromosome CDS659503 726 + 0.380165
purD LSA0663 Phosphoribosylamine--glycine ligase (Phosphoribosylglycinamide synthetase)chromosome CDS667952 1251 + 0.498801
purE LSA0652 Phospho ribosylaminoimidazole carboxylase (AIR carboxylase), catalytic subunitchromosome CDS656478 486 + 0.462963
purF LSA0659 Amidophosphoribosyltransferasechromosome CDS663355 1434 + 0.460251
purH LSA0662 Bifunctional protein:phospho ribosylaminoimidazole carboxamide formyltransferase (AICAR transformylase)and IMP cyclohydrolase (inosinicase)chromosome CDS666405 1533 + 0.445532
purK1 LSA0653 Phospho ribosylaminoimidazole carboxylase (AIR carboxylase), ATPase subunitchromosome CDS656947 1152 + 0.453993
purK2 LSA1556 Phospho ribosylaminoimidazole carboxylase (AIR carboxylase), ATPase subunitchromosome CDS1529389 1113 - 0.424978
purL LSA0658 Phospho ribosylformylglycinamidine synthase, synthetase domainchromosome CDS661154 2226 + 0.449236
purM LSA0660 Phospho ribosylformylglycinamidine cyclo-ligasechromosome CDS664794 1029 + 0.460641
purN LSA0661 Phospho ribosylglycinamide formyltransferasechromosome CDS665819 570 + 0.477193
purQ LSA0657 Phospho ribosylformylglycinamidine synthase, glutamine amidotransferase domainchromosome CDS660478 687 + 0.458515
purS LSA0656 Phospho ribosylformylglycinamidine synthasechromosome CDS660221 261 + 0.413793
pyrAA LSA0954 Carbamoyl-phosphate synthase, glutaminase subunitchromosome CDS941011 1077 + 0.449396
pyrAB LSA0955 Carbamoyl-phosphate synthase, catalytic subunitchromosome CDS942105 3183 + 0.447691
pyrB LSA0952 Aspartate carbamoyltransferase (Asparate transcarbamylase)chromosome CDS938789 918 + 0.441176
pyrC LSA0953 Dihydroorotasechromosome CDS939718 1290 + 0.476744
pyrDB LSA0957 Dihydroorotate oxidase, catalytic subunitchromosome CDS946183 924 + 0.504329
pyrE LSA0959 Orotate phosphoribosyltransferasechromosome CDS947826 639 + 0.475743
pyrF LSA0958 Orotidine-5'-phosphate decarboxylasechromosome CDS947110 720 + 0.461111
pyrG LSA1629 Cytidine triphosphate synthasechromosome CDS1613960 1593 - 0.396736
pyrH LSA1263 Uridylate kinase (Uridine monophosphate kinase) (UMP kinase)chromosome CDS1246332 726 - 0.418733
pyrP LSA0951 Uracil:cation symporterchromosome CDS937492 1305 + 0.467433
pyrR LSA0950 Bifunctional protein: uracil phosphoribosyltransferase and pyrimidine operon transcriptional regulatorchromosome CDS936778 540 + 0.412963
tdk LSA1138 Thymidine kinase (deoxuuridine kinase)chromosome CDS1125569 594 - 0.373737
thyA LSA1001 Thymidylate synthasechromosome CDS992134 951 - 0.414301
tmk LSA0340 Thymidylate kinase (dTMP kinase)chromosome CDS343329 645 + 0.444961
udk LSA1373 Uridine monophosphokinase (Cytidine monophosphokinase)chromosome CDS1341521 636 - 0.388365
upp LSA1133 Uracil phosphoribosyltransferase (UMP pyrophosphorylase)chromosome CDS1120440 630 - 0.414286
xpt LSA1557 Xanthine phosphoribosyltransferasechromosome CDS1530643 588 - 0.401361