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2024-05-18 21:16:45

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Frankia sp. CcI3, CcI3

Number of genes found: 88

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Frankia sp. CcI3, CcI3
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Francci3_0131 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS161702 471 - 0.535032
NA Francci3_3197 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS3787935 825 - 0.735758
NA Francci3_0861 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS1003962 696 + 0.739943
NA Francci3_4370 phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS5219476 1311 + 0.738368
NA Francci3_4421 Nucleoside phosphorylase-likeSubName: Full=Nucleoside phosphorylase-like; chromosome CDS5286937 1164 + 0.723368
NA Francci3_4458 adenosine deaminaseSubName: Full=Adenosine deaminase; EC=3.5.4.4; chromosome CDS5330352 1002 - 0.695609
NA Francci3_0839 AllantoinaseSubName: Full=Allantoinase; EC=3.5.2.5; chromosome CDS980608 1362 + 0.723935
NA Francci3_0845 amidohydrolaseSubName: Full=Amidohydrolase; chromosome CDS986294 1512 - 0.748677
NA Francci3_1135 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS1352080 471 - 0.658174
NA Francci3_0559 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS650911 537 - 0.700186
NA Francci3_1804 ribonucleotide reductase large subunitSubName: Full=Ribonucleotide reductase large subunit; chromosome CDS2139335 570 + 0.659649
NA Francci3_0869 Ham1-like proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; chromosome CDS1012117 663 - 0.740573
NA Francci3_4429 phosphoribosylformylglycinamidine synthetase PurSSubName: Full=Phosphoribosylformylglycinamidine synthetase PurS; chromosome CDS5294627 285 + 0.705263
NA Francci3_0840 AllantoicaseSubName: Full=Allantoicase; EC=3.5.3.4; chromosome CDS982216 1551 + 0.731141
NA Francci3_0688 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; chromosome CDS786445 783 - 0.715198
NA Francci3_1020 formyl transferase-likeSubName: Full=Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS1214471 594 - 0.579125
NA Francci3_3157 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS3734979 1827 - 0.697318
NA Francci3_4373 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS5222716 912 + 0.679825
NA Francci3_4417 phosphoribosylformylglycinamidine synthase IIRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS5281320 2286 + 0.729221
NA Francci3_2382 adenosine/AMP deaminaseSubName: Full=Adenosine deaminase; EC=3.5.4.4; chromosome CDS2758730 927 + 0.594391
NA Francci3_4349 Deoxycytidine triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS5192046 636 + 0.674528
NA Francci3_0691 purine nucleotide phosphorylaseRecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; chromosome CDS789910 873 - 0.706758
NA Francci3_1185 dihydroorotate dehydrogenaseSubName: Full=Dihydroorotate oxidase B, catalytic subunit; EC=1.3.98.1; chromosome CDS1417751 942 + 0.681529
NA Francci3_1770 adenosine deaminaseSubName: Full=Adenosine deaminase; EC=3.5.4.4; chromosome CDS2105701 999 + 0.665666
NA Francci3_3507 Ribonucleoside diphosphate reductase, B12-dependentSubName: Full=Ribonucleoside diphosphate reductase, B12-dependent; EC=1.17.4.1; chromosome CDS4188505 3846 - 0.693708
NA Francci3_0637 IMP dehydrogenase related 2SubName: Full=IMP dehydrogenase related 2; chromosome CDS720954 1131 + 0.717065
NA Francci3_3199 carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS3792135 1266 - 0.721959
NA Francci3_0472 Ppx/GppA phosphataseSubName: Full=Ppx/GppA phosphatase; chromosome CDS552691 936 + 0.724359
NA Francci3_2714 CMP/dCMP deaminase, zinc-bindingSubName: Full=tRNA-adenosine deaminase; EC=3.5.4.-; chromosome CDS3199094 591 + 0.664975
NA Francci3_3198 carbamoyl-phosphate synthase, large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS3788756 3393 - 0.703802
NA Francci3_4371 phosphoribosylaminoimidazole carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS5220790 525 + 0.718095
NA Francci3_1812 Thymidylate kinase-likeSubName: Full=Thymidylate kinase-like; chromosome CDS2148379 615 - 0.678049
NA Francci3_3962 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS4742105 975 + 0.678974
NA Francci3_0603 adenylate kinasesRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS689045 654 + 0.663609
NA Francci3_2366 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2740538 528 + 0.61553
NA Francci3_0094 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS115384 1635 + 0.71315
NA Francci3_0689 uracil phosphoribosyltransferaseSubName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; chromosome CDS787265 639 + 0.71831
NA Francci3_1807 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2142642 654 - 0.711009
NA Francci3_0150 putative 3-carboxy-cis,cis-muconate cycloisomeraseSubName: Full=3-carboxy-cis,cis-muconate cycloisomerase; EC=5.5.1.2; chromosome CDS177775 1230 + 0.735772
NA Francci3_1210 Nucleoside-diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1444851 414 + 0.693237
NA Francci3_4268 Uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS5091763 780 - 0.655128
NA Francci3_2547 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS3009571 432 - 0.645833
NA Francci3_3102 histidine triad (HIT) proteinSubName: Full=Histidine triad (HIT) protein; chromosome CDS3674701 396 - 0.694444
NA Francci3_2385 Ham1-like proteinSubName: Full=Ham1-like protein; chromosome CDS2761198 546 + 0.648352
NA Francci3_2436 protein-L-isoaspartate(D-aspartate)O-methyltrans feraseSubName: Full=Protein-L-isoaspartate(D-aspartate) O-methyltransferase; chromosome CDS2830347 1059 - 0.670444
NA Francci3_1456 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; chromosome CDS1746935 807 + 0.723668
NA Francci3_3599 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4301192 771 - 0.686122
NA Francci3_1099 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS1311131 750 - 0.678667
NA Francci3_2542 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3004932 684 + 0.73538
NA Francci3_4368 Adenylosuccinate synthaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS5216835 1284 + 0.679907
NA Francci3_2668 Adenylate kinase and related kinases-likeSubName: Full=Adenylate kinase and related kinases-like; chromosome CDS3150031 546 - 0.697802
NA Francci3_2440 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2835186 735 - 0.617687
NA Francci3_3547 Thymidylate synthase (FAD)RecName: Full=Thymidylate synthase ThyX; Short=TS; Short=TSase; EC=2.1.1.148; chromosome CDS4241052 798 - 0.694236
NA Francci3_3237 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS3832696 534 + 0.696629
NA Francci3_3201 dihydroorotase, multifunctional complex typeRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS3794449 1377 - 0.73711
NA Francci3_2066 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2429980 1338 - 0.656203
NA Francci3_4306 Thymidylate kinaseSubName: Full=Thymidylate kinase; EC=2.7.4.9; chromosome CDS5142635 2193 + 0.705882
NA Francci3_0900 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS1041786 438 - 0.673516
NA Francci3_1318 deoxyuridine 5'-triphosphate nucleotidohydrolaseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS1581861 591 + 0.730964
NA Francci3_4416 phosphoribosylformylglycinamidine synthase IRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS5280528 714 + 0.693277
NA Francci3_0835 amidohydrolaseSubName: Full=Adenine deaminase; EC=3.5.4.2; chromosome CDS974379 1887 + 0.735029
NA Francci3_3195 Guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS3786594 555 - 0.693694
NA Francci3_1375 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS1650340 567 + 0.72134
NA Francci3_0280 CMP/dCMP deaminase, zinc-bindingRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS325516 531 - 0.764595
NA Francci3_0657 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; chromosome CDS751457 1647 + 0.714633
NA Francci3_1281 Deoxyguanosinetriphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome CDS1530422 1263 + 0.729216
NA Francci3_1098 purine and other phosphorylases, family 1SubName: Full=Purine and other phosphorylases, family 1; chromosome CDS1309956 1173 - 0.669224
NA Francci3_3887 Adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS4650412 687 - 0.666667
NA Francci3_0656 phosphoribosylglycinamide formyltransferaseSubName: Full=Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; Flags: Precursor; chromosome CDS750810 651 + 0.694316
NA Francci3_0685 Thymidine phosphorylaseSubName: Full=Thymidine phosphorylase; EC=2.4.2.4; chromosome CDS783059 1305 + 0.725671
NA Francci3_1811 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS2147906 438 - 0.623288
NA Francci3_1752 GMP reductaseSubName: Full=Inosine-5-monophosphate dehydrogenase; EC=1.1.1.205; chromosome CDS2083526 1158 - 0.707254
NA Francci3_3202 aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS3795822 957 - 0.6907
NA Francci3_4372 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS5221311 1308 + 0.732416
NA Francci3_2381 Cytidylate kinase-likeSubName: Full=Cytidylate kinase-like; chromosome CDS2757947 729 + 0.620027
NA Francci3_0095 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; chromosome CDS117015 1110 + 0.723423
NA Francci3_0534 adenosine deaminaseSubName: Full=Adenosine deaminase; EC=3.5.4.4; chromosome CDS620383 1083 + 0.738689
NA Francci3_1510 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1801242 1245 + 0.711647
NA Francci3_0684 CMP/dCMP deaminase, zinc-bindingSubName: Full=Cytidine deaminase; EC=3.5.4.5; chromosome CDS782583 480 + 0.691667
NA Francci3_3920 Ppx/GppA phosphataseSubName: Full=Ppx/GppA phosphatase; chromosome CDS4688267 1062 - 0.743879
NA Francci3_3011 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS3572679 615 - 0.720325
NA Francci3_0686 adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome CDS784451 1101 + 0.675749
NA Francci3_1360 histidine triad (HIT) proteinSubName: Full=Histidine triad (HIT) protein; chromosome CDS1634830 579 + 0.677029
NA Francci3_0306 thymidylate kinaseSubName: Full=Thymidylate kinase; EC=2.7.4.9; chromosome CDS352958 639 + 0.732394
NA Francci3_1749 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS2081150 582 - 0.67354
NA Francci3_3203 Uracil phosphoribosyltransferaseRecName: Full=Bifunctional protein PyrR; chromosome CDS3796795 621 - 0.731079
NA Francci3_2600 ribose-phosphate pyrophosphokinaseSubName: Full=Ribose-phosphate pyrophosphokinase; EC=2.7.6.1; chromosome CDS3068384 942 - 0.68259
NA Francci3_0645 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS734128 1671 + 0.682226