Gene list
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COG category: Nucleotide transport and metabolism
Organism: Frankia sp. CcI3, CcI3
Number of genes found: 88
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Frankia sp. CcI3, CcI3 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Francci3_2436 | protein-L-isoaspartate(D-aspartate)O-methyltrans ferase | chromosome | CDS | 2830347 | 1059 | - | 0.670444 |
NA | Francci3_1360 | histidine triad (HIT) protein | chromosome | CDS | 1634830 | 579 | + | 0.677029 |
NA | Francci3_1098 | purine and other phosphorylases, family 1 | chromosome | CDS | 1309956 | 1173 | - | 0.669224 |
NA | Francci3_0861 | NUDIX hydrolase | chromosome | CDS | 1003962 | 696 | + | 0.739943 |
NA | Francci3_4429 | phosphoribosylformylglycinamidine synthetase PurS | chromosome | CDS | 5294627 | 285 | + | 0.705263 |
NA | Francci3_4373 | phosphoribosylaminoimidazole-succinocarboxamidesynthase | chromosome | CDS | 5222716 | 912 | + | 0.679825 |
NA | Francci3_0689 | uracil phosphoribosyltransferase | chromosome | CDS | 787265 | 639 | + | 0.71831 |
NA | Francci3_1752 | GMP reductase | chromosome | CDS | 2083526 | 1158 | - | 0.707254 |
NA | Francci3_3102 | histidine triad (HIT) protein | chromosome | CDS | 3674701 | 396 | - | 0.694444 |
NA | Francci3_1375 | adenine phosphoribosyltransferase | chromosome | CDS | 1650340 | 567 | + | 0.72134 |
NA | Francci3_2714 | CMP/dCMP deaminase, zinc-binding | chromosome | CDS | 3199094 | 591 | + | 0.664975 |
NA | Francci3_3599 | conserved hypothetical protein | chromosome | CDS | 4301192 | 771 | - | 0.686122 |
NA | Francci3_0835 | amidohydrolase | chromosome | CDS | 974379 | 1887 | + | 0.735029 |
NA | Francci3_0131 | NUDIX hydrolase | chromosome | CDS | 161702 | 471 | - | 0.535032 |
NA | Francci3_0656 | phosphoribosylglycinamide formyltransferase | chromosome | CDS | 750810 | 651 | + | 0.694316 |
NA | Francci3_3157 | CTP synthase | chromosome | CDS | 3734979 | 1827 | - | 0.697318 |
NA | Francci3_1456 | cytidylate kinase | chromosome | CDS | 1746935 | 807 | + | 0.723668 |
NA | Francci3_3547 | Thymidylate synthase (FAD) | chromosome | CDS | 4241052 | 798 | - | 0.694236 |
NA | Francci3_1281 | Deoxyguanosinetriphosphate triphosphohydrolase | chromosome | CDS | 1530422 | 1263 | + | 0.729216 |
NA | Francci3_3198 | carbamoyl-phosphate synthase, large subunit | chromosome | CDS | 3788756 | 3393 | - | 0.703802 |
NA | Francci3_1812 | Thymidylate kinase-like | chromosome | CDS | 2148379 | 615 | - | 0.678049 |
NA | Francci3_4416 | phosphoribosylformylglycinamidine synthase I | chromosome | CDS | 5280528 | 714 | + | 0.693277 |
NA | Francci3_0637 | IMP dehydrogenase related 2 | chromosome | CDS | 720954 | 1131 | + | 0.717065 |
NA | Francci3_2668 | Adenylate kinase and related kinases-like | chromosome | CDS | 3150031 | 546 | - | 0.697802 |
NA | Francci3_2066 | hypothetical protein | chromosome | CDS | 2429980 | 1338 | - | 0.656203 |
NA | Francci3_2385 | Ham1-like protein | chromosome | CDS | 2761198 | 546 | + | 0.648352 |
NA | Francci3_2547 | NUDIX hydrolase | chromosome | CDS | 3009571 | 432 | - | 0.645833 |
NA | Francci3_3201 | dihydroorotase, multifunctional complex type | chromosome | CDS | 3794449 | 1377 | - | 0.73711 |
NA | Francci3_1020 | formyl transferase-like | chromosome | CDS | 1214471 | 594 | - | 0.579125 |
NA | Francci3_1135 | NUDIX hydrolase | chromosome | CDS | 1352080 | 471 | - | 0.658174 |
NA | Francci3_1185 | dihydroorotate dehydrogenase | chromosome | CDS | 1417751 | 942 | + | 0.681529 |
NA | Francci3_4349 | Deoxycytidine triphosphate deaminase | chromosome | CDS | 5192046 | 636 | + | 0.674528 |
NA | Francci3_0684 | CMP/dCMP deaminase, zinc-binding | chromosome | CDS | 782583 | 480 | + | 0.691667 |
NA | Francci3_0839 | Allantoinase | chromosome | CDS | 980608 | 1362 | + | 0.723935 |
NA | Francci3_3195 | Guanylate kinase | chromosome | CDS | 3786594 | 555 | - | 0.693694 |
NA | Francci3_2542 | conserved hypothetical protein | chromosome | CDS | 3004932 | 684 | + | 0.73538 |
NA | Francci3_1770 | adenosine deaminase | chromosome | CDS | 2105701 | 999 | + | 0.665666 |
NA | Francci3_1807 | hypothetical protein | chromosome | CDS | 2142642 | 654 | - | 0.711009 |
NA | Francci3_1510 | hypothetical protein | chromosome | CDS | 1801242 | 1245 | + | 0.711647 |
NA | Francci3_3197 | orotidine 5'-phosphate decarboxylase | chromosome | CDS | 3787935 | 825 | - | 0.735758 |
NA | Francci3_3202 | aspartate carbamoyltransferase | chromosome | CDS | 3795822 | 957 | - | 0.6907 |
NA | Francci3_0691 | purine nucleotide phosphorylase | chromosome | CDS | 789910 | 873 | - | 0.706758 |
NA | Francci3_3011 | adenylate kinase | chromosome | CDS | 3572679 | 615 | - | 0.720325 |
NA | Francci3_4268 | Uridylate kinase | chromosome | CDS | 5091763 | 780 | - | 0.655128 |
NA | Francci3_0472 | Ppx/GppA phosphatase | chromosome | CDS | 552691 | 936 | + | 0.724359 |
NA | Francci3_3203 | Uracil phosphoribosyltransferase | chromosome | CDS | 3796795 | 621 | - | 0.731079 |
NA | Francci3_0686 | adenosine deaminase | chromosome | CDS | 784451 | 1101 | + | 0.675749 |
NA | Francci3_2382 | adenosine/AMP deaminase | chromosome | CDS | 2758730 | 927 | + | 0.594391 |
NA | Francci3_3199 | carbamoyl-phosphate synthase, small subunit | chromosome | CDS | 3792135 | 1266 | - | 0.721959 |
NA | Francci3_0657 | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | chromosome | CDS | 751457 | 1647 | + | 0.714633 |
NA | Francci3_3887 | Adenylate kinase | chromosome | CDS | 4650412 | 687 | - | 0.666667 |
NA | Francci3_2440 | hypothetical protein | chromosome | CDS | 2835186 | 735 | - | 0.617687 |
NA | Francci3_0685 | Thymidine phosphorylase | chromosome | CDS | 783059 | 1305 | + | 0.725671 |
NA | Francci3_0869 | Ham1-like protein | chromosome | CDS | 1012117 | 663 | - | 0.740573 |
NA | Francci3_1099 | NUDIX hydrolase | chromosome | CDS | 1311131 | 750 | - | 0.678667 |
NA | Francci3_1318 | deoxyuridine 5'-triphosphate nucleotidohydrolase | chromosome | CDS | 1581861 | 591 | + | 0.730964 |
NA | Francci3_4458 | adenosine deaminase | chromosome | CDS | 5330352 | 1002 | - | 0.695609 |
NA | Francci3_0534 | adenosine deaminase | chromosome | CDS | 620383 | 1083 | + | 0.738689 |
NA | Francci3_0280 | CMP/dCMP deaminase, zinc-binding | chromosome | CDS | 325516 | 531 | - | 0.764595 |
NA | Francci3_4371 | phosphoribosylaminoimidazole carboxylase, catalytic subunit | chromosome | CDS | 5220790 | 525 | + | 0.718095 |
NA | Francci3_4306 | Thymidylate kinase | chromosome | CDS | 5142635 | 2193 | + | 0.705882 |
NA | Francci3_1804 | ribonucleotide reductase large subunit | chromosome | CDS | 2139335 | 570 | + | 0.659649 |
NA | Francci3_4421 | Nucleoside phosphorylase-like | chromosome | CDS | 5286937 | 1164 | + | 0.723368 |
NA | Francci3_0603 | adenylate kinases | chromosome | CDS | 689045 | 654 | + | 0.663609 |
NA | Francci3_3920 | Ppx/GppA phosphatase | chromosome | CDS | 4688267 | 1062 | - | 0.743879 |
NA | Francci3_0840 | Allantoicase | chromosome | CDS | 982216 | 1551 | + | 0.731141 |
NA | Francci3_1749 | NUDIX hydrolase | chromosome | CDS | 2081150 | 582 | - | 0.67354 |
NA | Francci3_3237 | NUDIX hydrolase | chromosome | CDS | 3832696 | 534 | + | 0.696629 |
NA | Francci3_2600 | ribose-phosphate pyrophosphokinase | chromosome | CDS | 3068384 | 942 | - | 0.68259 |
NA | Francci3_1210 | Nucleoside-diphosphate kinase | chromosome | CDS | 1444851 | 414 | + | 0.693237 |
NA | Francci3_1811 | NUDIX hydrolase | chromosome | CDS | 2147906 | 438 | - | 0.623288 |
NA | Francci3_0900 | NUDIX hydrolase | chromosome | CDS | 1041786 | 438 | - | 0.673516 |
NA | Francci3_0095 | phosphoribosylformylglycinamidine cyclo-ligase | chromosome | CDS | 117015 | 1110 | + | 0.723423 |
NA | Francci3_4370 | phosphoribosylamine--glycine ligase | chromosome | CDS | 5219476 | 1311 | + | 0.738368 |
NA | Francci3_2381 | Cytidylate kinase-like | chromosome | CDS | 2757947 | 729 | + | 0.620027 |
NA | Francci3_0645 | GMP synthase | chromosome | CDS | 734128 | 1671 | + | 0.682226 |
NA | Francci3_0094 | amidophosphoribosyltransferase | chromosome | CDS | 115384 | 1635 | + | 0.71315 |
NA | Francci3_0306 | thymidylate kinase | chromosome | CDS | 352958 | 639 | + | 0.732394 |
NA | Francci3_4372 | adenylosuccinate lyase | chromosome | CDS | 5221311 | 1308 | + | 0.732416 |
NA | Francci3_4368 | Adenylosuccinate synthase | chromosome | CDS | 5216835 | 1284 | + | 0.679907 |
NA | Francci3_0688 | deoxyribose-phosphate aldolase | chromosome | CDS | 786445 | 783 | - | 0.715198 |
NA | Francci3_0845 | amidohydrolase | chromosome | CDS | 986294 | 1512 | - | 0.748677 |
NA | Francci3_3507 | Ribonucleoside diphosphate reductase, B12-dependent | chromosome | CDS | 4188505 | 3846 | - | 0.693708 |
NA | Francci3_0150 | putative 3-carboxy-cis,cis-muconate cycloisomerase | chromosome | CDS | 177775 | 1230 | + | 0.735772 |
NA | Francci3_0559 | orotate phosphoribosyltransferase | chromosome | CDS | 650911 | 537 | - | 0.700186 |
NA | Francci3_4417 | phosphoribosylformylglycinamidine synthase II | chromosome | CDS | 5281320 | 2286 | + | 0.729221 |
NA | Francci3_3962 | ribose-phosphate pyrophosphokinase | chromosome | CDS | 4742105 | 975 | + | 0.678974 |
NA | Francci3_2366 | hypothetical protein | chromosome | CDS | 2740538 | 528 | + | 0.61553 |