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2024-05-19 17:20:11

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Thiomicrospira denitrificans ATCC 33889, ATCC 33889

Number of genes found: 51

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Thiomicrospira denitrificans ATCC 33889, ATCC 33889
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Tmden_0905 AmidohydrolaseSubName: Full=Dihydroorotase; EC=3.5.2.3; chromosome CDS937744 1200 + 0.365833
NA Tmden_1636 Ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS1717576 927 + 0.389428
NA Tmden_1392 Adenosylhomocysteine nucleosidaseSubName: Full=Methylthioadenosine nucleosidase; EC=3.2.2.16; chromosome CDS1461521 714 - 0.371148
NA Tmden_1118 Adenine phosphoribosyl transferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS1171753 549 + 0.336976
NA Tmden_1088 Adenylate kinase, subfamilyRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1148968 648 - 0.395062
NA Tmden_0080 Carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS87099 1146 + 0.335951
NA Tmden_1831 Guanine deaminaseSubName: Full=Guanine deaminase; EC=3.5.4.3; chromosome CDS1914456 450 - 0.362222
NA Tmden_0264 Twin-arginine translocation pathway signalSubName: Full=Sulfate thiol esterase SoxB; chromosome CDS277455 1764 + 0.35771
NA Tmden_0490 Phosphoribosylformylglycinamidine synthetase PurSSubName: Full=Phosphoribosylformylglycinamidine synthetase PurS; chromosome CDS493656 243 - 0.349794
NA Tmden_0075 Adenylosuccinate synthaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS82325 1260 + 0.377778
NA Tmden_2068 Orotate phosphoribosyltransferase, Thermus typeRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS2157442 609 + 0.418719
NA Tmden_1098 Formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; EC=3.5.1.10; chromosome CDS1156748 837 - 0.309438
NA Tmden_0745 Deoxyguanosinetriphosphate triphosphohydrolaseSubName: Full=Deoxyguanosinetriphosphate triphosphohydrolase; EC=3.1.5.1; chromosome CDS768793 1338 + 0.342302
NA Tmden_1203 Histidine triad (HIT) proteinSubName: Full=Histidine triad (HIT) protein; chromosome CDS1269409 495 - 0.381818
NA Tmden_1126 Thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS1178588 576 + 0.333333
NA Tmden_0661 Ppx/GppA phosphataseSubName: Full=Ppx/GppA phosphatase; chromosome CDS676068 1470 - 0.335374
NA Tmden_0033 Phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS39919 1164 + 0.406357
NA Tmden_0547 Phosphoribosylformylglycinamidine synthase IIRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS549766 2214 + 0.403794
NA Tmden_2096 Ribonucleoside-diphosphate reductaseRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS2190915 2367 + 0.367976
NA Tmden_0147 CMP/dCMP deaminase, zinc-bindingSubName: Full=CMP/dCMP deaminase, zinc-binding; chromosome CDS152136 438 + 0.347032
NA Tmden_1871 Amidophosphoribosyl transferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS1951658 1356 + 0.379794
NA Tmden_1224 Dihydroorotate dehydrogenase 2RecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS1292006 1059 + 0.362606
NA Tmden_1775 Nucleoside-diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1857940 414 - 0.39372
NA Tmden_1447 Orotidine-5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS1517149 684 - 0.361111
NA Tmden_0461 Aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS463972 876 + 0.366438
NA Tmden_1796 Guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS1877992 621 - 0.36876
NA Tmden_1239 Ribonucleoside-triphosphate reductase, anaerobicSubName: Full=Ribonucleoside-triphosphate reductase, anaerobic; chromosome CDS1305097 2097 + 0.353362
NA Tmden_0122 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS127369 1038 + 0.304432
NA Tmden_2050 Phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; chromosome CDS2135870 996 + 0.393574
NA Tmden_1467 Carbamoyl-phosphate synthase, large subunit, glutamine-dependentRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS1538061 3258 + 0.381215
NA Tmden_0021 Deoxyguanosinetriphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome CDS26170 1098 + 0.321494
NA Tmden_0013 Ribonucleoside-diphosphate reductaseRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS19839 1023 + 0.328446
NA Tmden_0017 Thymidylate synthase complementing protein ThyXSubName: Full=Thymidylate synthase complementing protein ThyX; chromosome CDS23358 834 + 0.327338
NA Tmden_2092 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2186365 546 + 0.309524
NA Tmden_0071 Ham1-like proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS78689 600 + 0.371667
NA Tmden_2095 Adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS2189468 1332 + 0.385135
NA Tmden_0717 Uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS738544 714 + 0.371148
NA Tmden_0491 Phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS493930 714 - 0.329132
NA Tmden_1635 Cytosine deaminaseSubName: Full=Cytosine deaminase; EC=3.5.4.1; chromosome CDS1716570 438 - 0.390411
NA Tmden_1617 Formyl transferase-likeSubName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS1697140 558 + 0.320789
NA Tmden_1863 Phosphoribosylaminoimidazole carboxylaseRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS1945459 498 - 0.38755
NA Tmden_1087 Adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1148260 570 + 0.363158
NA Tmden_1768 HIT family proteinSubName: Full=HIT family protein; chromosome CDS1850864 369 + 0.317073
NA Tmden_2080 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS2169578 1629 + 0.392879
NA Tmden_0550 PhosphoribosylaminoimidazolecarboxamideformyltransferaseSubName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase; EC=2.1.2.3; EC=3.5.4.10; chromosome CDS553798 1536 + 0.377604
NA Tmden_0868 Histidine triad (HIT) proteinSubName: Full=Histidine triad (HIT) protein; chromosome CDS895091 399 - 0.345865
NA Tmden_0624 Dihydroorotase homodimeric typeSubName: Full=Dihydroorotase; EC=3.5.2.3; chromosome CDS637509 1008 + 0.37996
NA Tmden_0422 Glutamine amidotransferase class-IRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS422554 1551 + 0.37911
NA Tmden_0489 Phosphoribosylformylglycinamidine synthase IRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS492985 675 - 0.358519
NA Tmden_0686 AmidohydrolaseSubName: Full=Amidohydrolase; chromosome CDS697775 1227 - 0.365933
NA Tmden_0424 Phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS425069 1281 + 0.374707