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2024-09-21 00:16:52

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Rhizobium etli CFN 42, CFN 42

Number of genes found: 89

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Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA RHE_CH01713 putative nucleoside 2-deoxyribosyltransferase proteinSubName: Full=Putative nucleoside 2-deoxyribosyltransferase protein; chromosome CDS1794723 564 - 0.609929
NA RHE_CH03419 probable inosine-uridine preferring nucleoside hydrolase proteinSubName: Full=Probable inosine-uridine preferring nucleoside hydrolase protein; chromosome CDS3595540 921 + 0.664495
NA RHE_CH01413 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS1483579 360 + 0.594444
NA RHE_CH00245 putative glutamine amidotransferase proteinSubName: Full=Putative glutamine amidotransferase protein; chromosome CDS258833 738 + 0.670732
NA RHE_CH01908 putative hydrolase protein, HIT familySubName: Full=Putative hydrolase protein, HIT family; chromosome CDS1990492 426 - 0.610329
NA RHE_CH03779 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4007138 648 + 0.575617
NA RHE_CH00882 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS922121 552 + 0.61413
NA RHE_CH01407 putative ADP-ribose pyrophosphatase protein, mutT/nudiX familySubName: Full=Putative ADP-ribose pyrophosphatase protein, mutT/nudiX family; chromosome CDS1478965 561 - 0.632799
NA RHE_CH02266 putative hydrolase protein, MutT/nudix familySubName: Full=Putative hydrolase protein, MutT/nudix family; chromosome CDS2369641 366 + 0.625683
NA RHE_CH01957 probable deoxycytidylate deaminase family proteinSubName: Full=Probable deoxycytidylate deaminase family protein; chromosome CDS2041582 588 - 0.60034
NA RHE_CH00802 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS839700 867 - 0.604383
NA RHE_PF00282 probable nucleotide permease proteinSubName: Full=Probable nucleotide permease protein; p42f CDS311590 1287 - 0.615385
NA RHE_CH00361 probable nucleoside-triphosphatase HAM1-like proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; chromosome CDS374562 645 - 0.644961
NA RHE_PF00027 probable DNA hydrolase protein, MutT/nudix protein familySubName: Full=Probable DNA hydrolase protein, MutT/nudix protein family; p42f CDS27339 696 + 0.616379
NA RHE_CH03407 probable purine/pyrimidine phosphoribosyltransferase proteinSubName: Full=Probable purine/pyrimidine phosphoribosyltransferase protein; chromosome CDS3580189 696 + 0.652299
NA RHE_CH03540 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS3728448 555 + 0.61982
NA RHE_CH01641 probable dihydroorotase proteinRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS1727884 1290 - 0.646512
NA RHE_CH01942 putative DNA topology modulation kinase FlaR-like proteinSubName: Full=Putative DNA topology modulation kinase FlaR-like protein; chromosome CDS2024877 579 + 0.623489
NA RHE_CH01519 putative carbamoyl-phosphate-synthetase proteinSubName: Full=Putative carbamoyl-phosphate-synthetase protein; chromosome CDS1597459 1194 - 0.58124
NA RHE_CH00351 probable allantoinase proteinSubName: Full=Probable allantoinase protein; EC=3.5.2.3; EC=3.5.2.5; chromosome CDS361765 1380 - 0.647826
NA RHE_CH00127 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS138445 411 + 0.59854
NA RHE_CH03818 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS4041511 567 - 0.641975
add RHE_CH00197 adenosine deaminase proteinRecName: Full=Adenine deaminase; Short=ADE; EC=3.5.4.2; AltName: Full=Adenine aminohydrolase; Short=AAH; chromosome CDS210515 969 - 0.618163
adeC1 RHE_CH03094 adenine deaminase proteinRecName: Full=Adenine deaminase 1; Short=Adenase 1; Short=Adenine aminase 1; EC=3.5.4.2; chromosome CDS3239026 1698 + 0.626031
adeC2 RHE_CH03420 adenine deaminase proteinRecName: Full=Adenine deaminase 2; Short=Adenase 2; Short=Adenine aminase 2; EC=3.5.4.2; chromosome CDS3596457 1788 + 0.661074
adk RHE_CH01696 adenylate kinase (ATP-AMP transphosphorylase) proteinRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1779499 651 + 0.606759
allA RHE_CH03139 ureidoglycolate hydrolase proteinRecName: Full=Ureidoglycolate lyase; EC=4.3.2.3; AltName: Full=Ureidoglycolatase; chromosome CDS3291732 501 - 0.630738
amn RHE_CH01327 AMP nucleosidase proteinSubName: Full=AMP nucleosidase protein; EC=3.2.2.4; chromosome CDS1384653 1503 - 0.627412
aptch RHE_CH03035 adenine phosphoribosyltransferase proteinRecName: Full=Adenine phosphoribosyltransferase 1; Short=APRT 1; EC=2.4.2.7; chromosome CDS3175114 612 - 0.630719
carA RHE_CH02957 carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) proteinRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS3088856 1206 + 0.627695
carB RHE_CH02966 carbamoyl-phosphate synthase large chain (ammonia chain) proteinRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS3101914 3489 + 0.636859
cdd RHE_CH00191 cytidine deaminase proteinSubName: Full=Cytidine deaminase protein; EC=3.5.4.5; chromosome CDS205783 390 + 0.623077
cmk RHE_CH00098 cytidylate kinase (cytidine monophosphate kinase) proteinRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; chromosome CDS109619 777 - 0.616474
codAch1 RHE_CH00834 cytosine deaminase proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS874995 432 - 0.655093
codAch2 RHE_CH02043 cytosine deaminase proteinSubName: Full=Cytosine deaminase protein; EC=3.5.4.1; chromosome CDS2135133 1080 - 0.643519
cpdB RHE_CH01766 2`,3`-cyclic-nucleotide 2`-phosphodiesterase proteinSubName: Full=2`,3`-cyclic-nucleotide 2`-phosphodiesterase protein; EC=3.1.4.16; chromosome CDS1852357 1989 - 0.602313
dcd RHE_CH00524 2`-deoxycytidine 5`-triphosphate deaminase proteinSubName: Full=2`-deoxycytidine 5`-triphosphate deaminase protein; EC=3.5.4.13; chromosome CDS541160 1092 + 0.638278
deoA RHE_CH00194 thymidine phosphorylase proteinSubName: Full=Thymidine phosphorylase protein; EC=2.4.2.4; chromosome CDS207750 1308 + 0.651376
deoC RHE_CH00193 2-deoxyribose-5-phosphate aldolase proteinSubName: Full=2-deoxyribose-5-phosphate aldolase protein; EC=4.1.2.4; chromosome CDS206972 777 + 0.633205
deoD RHE_CH00192 purine-nucleoside phosphorylase proteinRecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; chromosome CDS206169 807 + 0.625775
dgt RHE_CH01817 deoxyguanosinetriphosphate triphosphohydrolase proteinRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome CDS1902373 1218 + 0.612479
dht RHE_CH03292 dihydropyrimidinase proteinSubName: Full=Dihydropyrimidinase protein; EC=3.5.2.2; EC=3.5.2.3; chromosome CDS3454335 1455 + 0.62268
dut RHE_CH00330 deoxyuridine 5`triphosphate nucleotidohydrolase proteinRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS335346 471 - 0.66242
fhs RHE_CH03078 formate-tetrahydrofolate ligase proteinRecName: Full=Formate--tetrahydrofolate ligase; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase; Short=FHS; Short=FTHFS; chromosome CDS3221471 1680 - 0.62381
gmk2 RHE_CH01448 guanylate kinase (GMP kinase) proteinRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS1518591 663 + 0.644042
gpt RHE_CH01754 xanthine-guanine phosphoribosyltransferase proteinRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome CDS1839612 495 - 0.610101
guaA1 RHE_CH00297 GMP synthase-glutamine amidotransferase proteinRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS303945 1563 - 0.634037
guaA2 RHE_CH03909 GMP synthase-glutamine amidotransferase proteinSubName: Full=GMP synthase-glutamine amidotransferase protein; chromosome CDS4140869 753 + 0.632138
guaD RHE_CH03130 guanine deaminase proteinSubName: Full=Guanine deaminase protein; EC=3.5.4.3; chromosome CDS3279899 1311 + 0.63463
hpt RHE_CH03800 hypoxanthine phosphoribosyltransferase proteinSubName: Full=Hypoxanthine phosphoribosyltransferase protein; EC=2.4.2.8; chromosome CDS4027323 543 - 0.611418
iunH1 RHE_CH00366 inosine-uridine preferring nucleoside hydrolase proteinSubName: Full=Inosine-uridine preferring nucleoside hydrolase protein; chromosome CDS378352 945 - 0.62328
iunH2 RHE_CH02485 inosine-uridine preferring nucleoside hydrolase proteinSubName: Full=Inosine-uridine preferring nucleoside hydrolase protein; EC=3.2.2.1; chromosome CDS2596487 906 - 0.633554
ndk RHE_CH01472 nucleoside-diphosphate-kinase proteinRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1545220 423 + 0.614657
nrd RHE_CH01753 ribonucleotide-diphosphate reductase proteinSubName: Full=Ribonucleotide-diphosphate reductase protein; chromosome CDS1835177 3816 - 0.620807
nrdE RHE_CH03716 ribonucleotide-diphosphate reductase, alpha subunit proteinRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS3937312 2082 - 0.57877
nrdF RHE_CH03715 ribonucleoside-diphosphate reductase, beta subunit proteinRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS3936162 975 - 0.577436
nrdI RHE_CH03717 ribonucleotide reductase proteinRecName: Full=Protein NrdI; chromosome CDS3939495 405 - 0.587654
pfs RHE_CH00298 methylthioadenosine nucleosidase/adenosylhomocysteine nucleosidase proteinSubName: Full=Methylthioadenosine nucleosidase/adenosylhomocysteine nucleosidase protein; EC=3.2.2.16; EC=3.2.2.9; chromosome CDS305606 639 - 0.635368
ppx1 RHE_CH00788 exopolyphosphatase proteinSubName: Full=Exopolyphosphatase protein; EC=3.6.1.11; chromosome CDS825735 1290 + 0.682946
ppx2 RHE_CH01492 exopolyphosphatase proteinSubName: Full=Exopolyphosphatase protein; EC=3.6.1.11; chromosome CDS1565083 1521 + 0.624589
prsAch RHE_CH03023 ribose-phosphate pyrophosphokinase proteinRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS3162911 933 + 0.609861
purA RHE_CH03344 adenylosuccinate synthetase proteinRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS3508200 1299 - 0.623557
purB RHE_CH02273 adenylosuccinate lyase proteinSubName: Full=Adenylosuccinate lyase protein; EC=4.3.2.2; chromosome CDS2374294 1308 + 0.637615
purC1 RHE_CH02278 phosphoribosylaminoimidazole-succinocarboxamide synthase proteinRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS2380890 765 + 0.583007
purC2 RHE_CH03409 phosphoribosylaminoimidazole-succinocarboxamide synthase proteinRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS3582852 945 + 0.591534
purD RHE_CH00886 phosphoribosylamine-glycine ligase proteinRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS926781 1284 + 0.6581
purE RHE_CH03531 phosphoribosylaminoimidazole carboxylase catalytic subunit proteinRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS3720341 438 + 0.639269
purF RHE_CH01428 glutamine phosphoribosylpyrophosphate amidotransferase proteinRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; Short=GPATase; Flags: Precursor; chromosome CDS1498951 1491 - 0.616365
purH RHE_CH04107 IMPcyclohydrolase/ phosphoribosylaminoimidazolecarboxamideform yltransferase proteinRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS4356166 1617 - 0.621521
purK RHE_CH03532 phosphoribosylaminoimidazole carboxylase, ATPase subunit proteinSubName: Full=Phosphoribosylaminoimidazole carboxylase, ATPase subunit protein; EC=4.1.1.21; chromosome CDS3720724 1122 + 0.645276
purL RHE_CH02286 phosphoribosylformylglycinamidine synthetase proteinRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS2386319 2232 + 0.638889
purM RHE_CH01488 5`-phosphoribosyl-5-aminoimidazole synthetase proteinRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS1559655 1074 - 0.655493
purN RHE_CH01487 phosphoribosylglycinamide formyltransferase proteinSubName: Full=Phosphoribosylglycinamide formyltransferase protein; EC=2.1.2.2; chromosome CDS1558987 618 - 0.661812
purQ RHE_CH02281 phosphoribosylformylglycinamidine synthase proteinRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS2382512 672 + 0.619048
purS RHE_CH02279 phosphoribosylformylglycinamidine synthase proteinSubName: Full=Phosphoribosylformylglycinamidine synthase protein; chromosome CDS2381670 243 + 0.600823
purUch RHE_CH00225 formyltetrahydrofolate deformylase proteinSubName: Full=Formyltetrahydrofolate deformylase protein; EC=3.5.1.10; chromosome CDS239637 885 - 0.60791
pyrB RHE_CH01642 aspartate carbamoyltransferase proteinRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS1729170 957 - 0.630094
pyrC RHE_CH00469 dihydroorotase proteinRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS482210 1047 + 0.646609
pyrD RHE_CH00540 dihydroorotate dehydrogenase proteinRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS556862 1089 + 0.64371
pyrE RHE_CH00474 orotate phosphoribosyltransferase proteinRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS486432 690 + 0.633333
pyrF RHE_CH00314 orotidine 5`-phosphate decarboxylase proteinRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS321276 708 - 0.652542
pyrG RHE_CH02184 CTP synthase proteinRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS2289575 1629 - 0.618785
pyrH RHE_CH01915 uridylate kinase proteinRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS1996876 723 + 0.604426
tdk RHE_CH03084 thymidine kinase proteinRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS3229392 603 - 0.625207
thyA RHE_CH02799 thymidylate synthase proteinRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS2913532 795 - 0.592453
tmk RHE_CH02160 thymidylate kinase proteinRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS2265747 711 - 0.64135
upp RHE_CH00196 uracil phosphoribosyltransferase proteinRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS209761 645 - 0.610853
xdhA RHE_CH03124 xanthine dehydrogenase proteinSubName: Full=Xanthine dehydrogenase protein; chromosome CDS3271691 1467 + 0.638037
xdhB RHE_CH03125 xanthine dehydrogenase proteinSubName: Full=Xanthine dehydrogenase protein; chromosome CDS3273339 2340 + 0.634615