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2024-05-19 16:19:28

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Thiobacillus denitrificans ATCC 25259, ATCC 25259

Number of genes found: 68

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Thiobacillus denitrificans ATCC 25259, ATCC 25259
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Tbd_0058 ribonucleoside-diphosphate reductase alpha chainRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS60870 1803 - 0.706046
NA Tbd_0721 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS762443 1209 - 0.688999
NA Tbd_0473 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS496096 630 - 0.666667
NA Tbd_0778 probable 5'-methylthioadenosine phosphorylaseRecName: Full=Probable S-methyl-5-thioinosine phosphorylase; EC=2.4.2.44; AltName: Full=5-methylthioinosine phosphorylase; AltName: Full=Purine nucleoside phosphorylase; chromosome CDS822174 762 + 0.669291
NA Tbd_0777 hypoxanthine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; chromosome CDS821606 558 + 0.682796
NA Tbd_0747 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS791812 534 - 0.636704
NA Tbd_0103 transcriptional regulator PyrR, putativeSubName: Full=Transcriptional regulator PyrR, putative; chromosome CDS110467 561 - 0.686275
NA Tbd_0255 orotate phosphoribosyl transferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS276669 639 + 0.619718
NA Tbd_0563 probable sulfur oxidation signal protein, twin-arginine translocation pathwaySubName: Full=Probable sulfur oxidation signal protein, twin-arginine translocation pathway; chromosome CDS591642 1833 - 0.642117
NA Tbd_0619 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS650622 1641 + 0.638635
NA Tbd_2459 phosphoribosylglycinamide synthetaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS2530099 1278 + 0.699531
NA Tbd_2583 dihydroorotase multifunctional complex typeRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS2657951 1275 + 0.678431
NA Tbd_2599 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2676018 303 - 0.640264
NA Tbd_1128 Carbamoyl-phosphate synthase, large subunit, glutamine-dependentRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS1182353 3207 + 0.650764
NA Tbd_2661 phosphoribosylaminoimidazole carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS2735363 498 + 0.684739
NA Tbd_0775 phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS819683 1197 - 0.704261
NA Tbd_1286 putative 5'-nucleotidase/2' 3'-cyclic phosphodiesteraseSubName: Full=Putative 5-nucleotidase/2 3-cyclic phosphodiesterase; Flags: Precursor; chromosome CDS1353047 2064 + 0.653585
NA Tbd_0787 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS830316 714 + 0.682073
NA Tbd_0876 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS926193 711 - 0.652602
NA Tbd_2408 glutamate--cysteine ligase GshASubName: Full=Glutamate--cysteine ligase GshA; chromosome CDS2479620 1281 + 0.63466
NA Tbd_1975 ribonucleoside-diphosphate reductase beta chainRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS2064524 1131 - 0.626879
NA Tbd_0955 Cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; chromosome CDS1017762 678 + 0.70059
NA Tbd_2107 deoxycytidine triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS2196783 567 - 0.613757
NA Tbd_0960 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS1022197 738 + 0.710027
NA Tbd_2467 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2539408 1011 - 0.663699
NA Tbd_1216 probable cytosine/adenosine deaminasesRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS1271722 456 + 0.686404
NA Tbd_1751 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS1842350 1563 - 0.643634
NA Tbd_2668 phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetaseSubName: Full=Phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase; EC=6.3.2.6; Flags: Precursor; chromosome CDS2740951 1998 + 0.684685
NA Tbd_2132 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2219327 663 + 0.622926
NA Tbd_2586 DeoxyUTP pyrophosphataseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS2662344 441 - 0.680272
NA Tbd_2662 phosphoribosylaminoimidazole carboxylase, ATPase subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase, ATPase subunit; EC=4.1.1.21; Flags: Precursor; chromosome CDS2735850 1155 + 0.688312
NA Tbd_1977 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome CDS2069406 855 + 0.636257
NA Tbd_2458 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase bifunctional enzymeRecName: Full=Bifunctional purine biosynthesis protein PurH; chromosome CDS2528428 1560 + 0.670513
NA Tbd_0316 deoxyguanosinetriphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome CDS340511 1131 + 0.660477
NA Tbd_0590 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS619256 429 + 0.622378
NA Tbd_2581 uracil phosphoribosyltransferaseSubName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; chromosome CDS2656439 495 + 0.672727
NA Tbd_1467 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1551864 399 + 0.706767
NA Tbd_2421 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2492381 714 - 0.515406
NA Tbd_0387 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS415528 951 + 0.639327
NA Tbd_1504 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1593889 654 - 0.643731
NA Tbd_0109 dihydroorotaseRecName: Full=Dihydroorotase; EC=3.5.2.3; chromosome CDS115576 1035 + 0.679227
NA Tbd_1976 ribonucleoside-diphosphate reductase alpha chainRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS2066037 2925 - 0.65094
NA Tbd_2666 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS2739243 642 - 0.697819
NA Tbd_0478 Ham1-like proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; chromosome CDS500368 600 + 0.661667
NA Tbd_1621 5'-nucleotidase/2' 3'-cyclic phosphodiesteraseSubName: Full=5-nucleotidase/2 3-cyclic phosphodiesterase; Flags: Precursor; chromosome CDS1705626 1734 - 0.619377
NA Tbd_2582 aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS2656930 954 + 0.660377
NA Tbd_2171 ribonucleotide reductaseSubName: Full=Ribonucleotide reductase; chromosome CDS2255712 2031 - 0.643033
NA Tbd_0607 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS634770 1299 + 0.662048
NA Tbd_0947 chlorohydrolase/cytosine deaminase family proteinSubName: Full=Chlorohydrolase/cytosine deaminase family protein; chromosome CDS1007134 1326 - 0.701357
NA Tbd_1465 ribose-phosphate pyrophosphokinaseSubName: Full=Ribose-phosphate pyrophosphokinase; EC=2.7.6.1; chromosome CDS1549634 984 + 0.698171
NA Tbd_0356 5'-nucleotidaseSubName: Full=5-nucleotidase; EC=3.1.3.5; Flags: Precursor; chromosome CDS385696 1968 + 0.651931
NA Tbd_1908 amidophosphoribosyl transferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS2004113 1521 - 0.652202
NA Tbd_1543 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS1627747 615 - 0.710569
NA Tbd_0629 phosphoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS661604 3957 + 0.689411
NA Tbd_1292 putative 5'-nucleotidase/2' 3'-cyclic phosphodiesteraseSubName: Full=Putative 5-nucleotidase/2 3-cyclic phosphodiesterase; Flags: Precursor; chromosome CDS1363389 1788 + 0.647651
NA Tbd_0518 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS547610 1371 + 0.658643
NA Tbd_2667 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; chromosome CDS2739881 939 - 0.680511
NA Tbd_0645 dihydroorotate dehydrogenase 2RecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS685315 1014 - 0.679487
NA Tbd_2012 putative esteraseSubName: Full=Putative esterase; Flags: Precursor; chromosome CDS2101036 2142 + 0.64986
NA Tbd_2040 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS2128695 795 - 0.63522
NA Tbd_1046 xopolyphosphataseSubName: Full=Xopolyphosphatase; EC=3.6.1.11; chromosome CDS1110966 1476 + 0.707317
NA Tbd_2635 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2708475 942 + 0.679406
NA Tbd_2052 deoxynucleoside kinaseSubName: Full=Deoxynucleoside kinase; chromosome CDS2139898 642 + 0.64486
NA Tbd_1576 putative hydrolaseSubName: Full=Putative hydrolase; chromosome CDS1659891 549 - 0.686703
NA Tbd_1705 probable HIT family proteinSubName: Full=Probable HIT family protein; chromosome CDS1795496 339 - 0.613569
NA Tbd_1729 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1813832 765 + 0.67451
NA Tbd_0218 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS238815 429 - 0.689977
NA Tbd_1127 Carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS1181211 1140 + 0.666667