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2024-05-19 08:06:30

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Pseudomonas fluorescens PfO-1, PfO-1

Number of genes found: 98

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Pseudomonas fluorescens PfO-1, PfO-1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Pfl_1794 AmidohydrolaseSubName: Full=Guanine deaminase; EC=3.5.4.3; chromosome CDS1998809 1305 - 0.631418
NA Pfl_1143 Phage Tail CollarSubName: Full=Putative phage tail fiber-related protein; chromosome CDS1318538 2454 + 0.590872
NA Pfl_4753 Ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS5357049 933 + 0.549839
NA Pfl_0612 Phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS719632 1293 - 0.641918
NA Pfl_3869 Methylthioadenosine phosphorylaseRecName: Full=Probable S-methyl-5-thioinosine phosphorylase; EC=2.4.2.44; AltName: Full=5-methylthioinosine phosphorylase; AltName: Full=Purine nucleoside phosphorylase; chromosome CDS4375632 738 - 0.621951
NA Pfl_0675 AmidohydrolaseSubName: Full=Putative atrazine degradation related protein (Amidohydrolase); chromosome CDS789833 1359 - 0.632082
NA Pfl_1202 Deoxycytidine triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS1374064 567 + 0.583774
NA Pfl_1796 Xanthine dehydrogenaseSubName: Full=Putative xanthine dehydrogenase large subunit; EC=1.1.1.20; chromosome CDS2001112 2394 - 0.619883
NA Pfl_1741 Glutamine amidotransferase class-ISubName: Full=Putative amino transferase; chromosome CDS1934370 723 + 0.59751
NA Pfl_5313 Uracil phosphoribosyltransferaseSubName: Full=Bifunctional protein, pyrimidine operon regulatory protein: uracil phosphoribosyltransferase; EC=2.4.2.9; chromosome CDS5977981 504 + 0.666667
NA Pfl_5622 Phosphoribosylaminoimidazole carboxylaseRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS6295927 492 - 0.630081
NA Pfl_4073 Cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS4601394 690 - 0.602899
NA Pfl_1070 Adenylate kinase, subfamilyRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1239968 651 + 0.599078
NA Pfl_0766 Carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS899309 1161 + 0.61068
NA Pfl_2573 Xanthine/uracil permeaseSubName: Full=Putative transmembrane transport protein; chromosome CDS2949196 1467 - 0.62304
NA Pfl_3434 Hydroxydechloroatrazine ethylaminohydrolaseSubName: Full=Amidohydrolase 1; chromosome CDS3915741 1389 + 0.646508
NA Pfl_0493 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative membrane transport-related permease; chromosome CDS572127 1293 + 0.637278
NA Pfl_1119 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS1296127 1632 + 0.605392
NA Pfl_4519 Dihydroorotase homodimeric typeRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS5093938 1047 + 0.640879
NA Pfl_1902 Amidophosphoribosyl transferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS2172745 1506 + 0.601594
NA Pfl_5152 Histidine triad (HIT) proteinSubName: Full=Uncharacterized protein; chromosome CDS5793281 465 + 0.47957
NA Pfl_3351 Possible Transcriptional activator, TenA familySubName: Full=Uncharacterized protein; chromosome CDS3826011 675 + 0.611852
NA Pfl_4080 AmidohydrolaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine deaminase; Short=MTA/SAH deaminase; EC=3.5.4.28; EC=3.5.4.31; chromosome CDS4611958 1335 + 0.644944
NA Pfl_1704 Allantoicase repeatRecName: Full=Probable allantoicase; EC=3.5.3.4; AltName: Full=Allantoate amidinohydrolase; chromosome CDS1900440 996 - 0.620482
NA Pfl_3598 Adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS4066638 1416 + 0.613701
NA Pfl_0767 Carbamoyl-phosphate synthase, large subunit, glutamine-dependentRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; Flags: Precursor; chromosome CDS900595 3222 + 0.602731
NA Pfl_1273 Delta crystallinSubName: Full=3-carboxy-cis,cis-muconate cycloisomerase; EC=5.5.1.2; chromosome CDS1446387 1365 + 0.659341
NA Pfl_3147 AmidohydrolaseSubName: Full=Putative amidohydrolase; chromosome CDS3612822 1488 + 0.647177
NA Pfl_3440 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative integral membrane transporter; chromosome CDS3922813 1485 - 0.618855
NA Pfl_4311 CTP synthase domain proteinSubName: Full=Putative transferase; chromosome CDS4868219 708 + 0.621469
NA Pfl_4152 Thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS4689738 633 - 0.636651
NA Pfl_4605 Nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS5206726 426 - 0.551643
NA Pfl_3247 Ppx/GppA phosphataseSubName: Full=Putative exopolyphosphatase (Possibly truncated); chromosome CDS3727380 936 + 0.632479
NA Pfl_2729 Xanthine/uracil permeaseSubName: Full=Xanthine/uracil permease family; chromosome CDS3145843 1341 + 0.601044
NA Pfl_1009 NUDIX hydrolaseSubName: Full=Uncharacterized protein; chromosome CDS1175049 552 - 0.621377
NA Pfl_5541 DeoxyUTP pyrophosphatase subfamily 1RecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS6210403 456 + 0.629386
NA Pfl_5315 Dihydroorotase multifunctional complex typeRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS5979513 1272 + 0.670597
NA Pfl_1871 Xanthine/uracil permeaseSubName: Full=Putative transport-related membrane protein; chromosome CDS2133599 1521 + 0.620644
NA Pfl_0613 PhosphoribosylaminoimidazolecarboxamideformyltransferaseRecName: Full=Bifunctional purine biosynthesis protein PurH; chromosome CDS721078 1620 - 0.624691
NA Pfl_1374 Phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS1547120 714 + 0.579832
NA Pfl_1703 Ureidoglycolate hydrolaseRecName: Full=Ureidoglycolate lyase; EC=4.3.2.3; AltName: Full=Ureidoglycolatase; chromosome CDS1899816 504 - 0.577381
NA Pfl_5314 Aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS5978512 1005 + 0.649751
NA Pfl_5549 Guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS6217332 621 + 0.594203
NA Pfl_5373 Thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS6035683 972 - 0.604938
NA Pfl_3758 Purine nucleoside permeaseSubName: Full=Putative nucleoside-sepcific transport system, substrate-binding protein; Flags: Precursor; chromosome CDS4256383 1023 + 0.638319
NA Pfl_4246 Ribonucleoside-diphosphate reductaseRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS4788786 2895 + 0.61209
NA Pfl_3441 D-hydantoinaseSubName: Full=Putative D-hydantoinase; EC=3.5.2.2; chromosome CDS3924919 1440 + 0.626389
NA Pfl_3146 N-isopropylammelide isopropylaminohydrolaseSubName: Full=Putative deaminase; chromosome CDS3611629 1197 + 0.645781
NA Pfl_5493 Adenylate cyclaseSubName: Full=Adenylate cyclase; chromosome CDS6160098 2844 + 0.626582
NA Pfl_1633 Phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS1823825 1059 - 0.634561
NA Pfl_3779 N-isopropylammelide isopropylaminohydrolaseSubName: Full=Cytosine deaminase; EC=3.5.4.1; chromosome CDS4275122 1236 + 0.627832
NA Pfl_4441 conserved hypothetical proteinSubName: Full=Putative membrane protein; Flags: Precursor; chromosome CDS5000879 1545 + 0.614239
NA Pfl_4196 Orotidine-5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS4737020 735 - 0.651701
NA Pfl_4417 Histidine triad (HIT) proteinSubName: Full=Uncharacterized protein; chromosome CDS4974530 435 - 0.609195
NA Pfl_0999 Phosphoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS1161311 3897 + 0.628432
NA Pfl_1797 Molybdopterin dehydrogenase, FAD-bindingSubName: Full=Putative xanthine dehydrogenase; chromosome CDS2003498 1455 - 0.628179
NA Pfl_0357 Formiminoglutamate deiminaseSubName: Full=Putative hydrolase; chromosome CDS407000 1365 - 0.6337
NA Pfl_4728 Uracil phosphoribosyl transferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS5333914 639 + 0.591549
NA Pfl_3392 tRNA--hydroxylaseSubName: Full=tRNA hydroxylase; chromosome CDS3868833 609 - 0.609195
NA Pfl_1014 Phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS1177764 1182 + 0.624366
NA Pfl_0457 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS524384 414 - 0.5
NA Pfl_1810 Adenine phosphoribosyl transferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS2023103 549 - 0.6102
NA Pfl_1632 Phosphoribosylglycinamide formyltransferaseSubName: Full=Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS1823175 651 - 0.614439
NA Pfl_3237 NUDIX hydrolaseSubName: Full=Uncharacterized protein; chromosome CDS3719142 564 + 0.613475
NA Pfl_1756 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative allantoin permease; chromosome CDS1949913 1545 - 0.613592
NA Pfl_5326 Ham1-like proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; chromosome CDS5987966 597 + 0.646566
NA Pfl_4584 Cytidine/deoxycytidylate deaminase, zinc-binding regionRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS5180610 498 - 0.65261
NA Pfl_5621 Phosphoribosylaminoimidazole carboxylase, ATPase subunitSubName: Full=5-(Carboxyamino)imidazole ribonucleotide synthase; EC=4.1.1.21; chromosome CDS6294834 1083 - 0.629732
NA Pfl_4136 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative transmembrane protein; chromosome CDS4673957 1467 - 0.633947
NA Pfl_3290 NUDIX hydrolaseSubName: Full=Putative hydrolaso; chromosome CDS3774748 363 + 0.606061
NA Pfl_0361 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative histidine ABC transport system, membrane protein; chromosome CDS411966 1473 + 0.617787
NA Pfl_5463 Ppx/GppA phosphataseSubName: Full=Exopolyphosphatase; EC=3.6.1.11; chromosome CDS6129227 1503 + 0.630738
NA Pfl_4727 PhosphoribosyltransferaseSubName: Full=Putative hypoxanthine-guanine phosphoribosyltransferase; chromosome CDS5333191 558 - 0.584229
NA Pfl_5425 conserved hypothetical proteinSubName: Full=Putative exported protein; Flags: Precursor; chromosome CDS6090887 318 + 0.625786
NA Pfl_2730 Cytidine/deoxycytidylate deaminase, zinc-binding regionSubName: Full=Cytidine/deoxycytidylate deaminase family protein; EC=3.5.4.3; chromosome CDS3147214 510 + 0.623529
NA Pfl_0528 Adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS611314 1290 + 0.617829
NA Pfl_1786 Dihydroorotate dehydrogenase 2RecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS1987618 1020 + 0.640196
NA Pfl_3270 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative permease for cytosine/purines, uracil, thiamine, allantoin; chromosome CDS3752077 1416 + 0.625
NA Pfl_4028 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4552155 651 - 0.554532
NA Pfl_4295 Ribonucleotide reductaseRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS4852604 1251 + 0.589928
NA Pfl_3778 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative cytosine transport-related membrane protein; chromosome CDS4273837 1272 + 0.638365
NA Pfl_4942 AMP nucleosidaseSubName: Full=AMP nucleosidase; EC=3.2.2.4; chromosome CDS5567448 1500 - 0.625333
NA Pfl_3261 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative transport-related membrane protein; chromosome CDS3743042 1407 - 0.606254
NA Pfl_4587 Glutamine amidotransferase class-IRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS5185841 1578 - 0.61597
NA Pfl_5520 Xanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; Short=XPRTase; EC=2.4.2.22; chromosome CDS6189628 573 + 0.603839
NA Pfl_4436 Formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; EC=3.5.1.10; chromosome CDS4995915 849 - 0.603062
NA Pfl_5663 DihydroorotaseSubName: Full=Putative dihydroorotase; chromosome CDS6343000 1338 + 0.610613
NA Pfl_5107 Histidine triad (HIT) proteinSubName: Full=Putative HIT domain-containing protein; chromosome CDS5741145 381 + 0.580052
NA Pfl_3973 Deoxyguanosinetriphosphate triphosphohydrolaseSubName: Full=Putative deoxyguanosinetriphosphate triphosphohydrolase; EC=3.1.5.1; chromosome CDS4497275 1329 + 0.633559
NA Pfl_1103 Uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS1277062 744 + 0.586021
NA Pfl_3433 Xanthine/uracil permeaseSubName: Full=Xanthine/uracil permease protein; chromosome CDS3914373 1356 + 0.640855
NA Pfl_4729 Xanthine/uracil permeaseSubName: Full=Uracil permease; chromosome CDS5334555 1275 + 0.621961
NA Pfl_1701 Xanthine/uracil permeaseSubName: Full=Putative permease protein; chromosome CDS1896923 1359 - 0.632082
NA Pfl_0671 Adenosine deaminaseRecName: Full=Adenine deaminase; Short=ADE; EC=3.5.4.2; AltName: Full=Adenine aminohydrolase; Short=AAH; chromosome CDS785257 954 - 0.604822
NA Pfl_1925 Inosine/uridine-preferring nucleoside hydrolaseSubName: Full=Putative inosine-uridine preferring nucleoside hydrolase; EC=3.2.2.1; Flags: Precursor; chromosome CDS2197021 1029 + 0.588921
NA Pfl_5203 Formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; EC=3.5.1.10; chromosome CDS5850776 858 - 0.618881
NA Pfl_5544 Orotate phosphoribosyl transferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS6213498 645 - 0.626357
NA Pfl_1455 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Putative transmembrane transport protein; chromosome CDS1626498 1512 - 0.640212