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2024-05-02 19:58:20

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 79

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_3033 putative proteoglycanchromosome CDS3191314 1395 + 0.529032
NA SSO_3036 hypothetical proteinchromosome CDS3196296 426 + 0.516432
add SSO_1535 adenosine deaminasechromosome CDS1610111 1002 - 0.535928
adk SSO_0461 adenylate kinasechromosome CDS489363 645 + 0.516279
amn SSO_2047 AMP nucleosidasechromosome CDS2146388 1455 - 0.497595
apt SSO_0456 adenine phosphoribosyltransferasechromosome CDS483606 552 + 0.541667
carA SSO_0037 carbamoyl-phosphate synthetase, glutamine (small) subunitchromosome CDS36817 1149 + 0.532637
carB SSO_0038 carbamoyl-phosphate synthase large subunitchromosome CDS37983 3222 + 0.562384
cdd SSO_2199 cytidine/deoxycytidine deaminasechromosome CDS2304778 885 + 0.548023
cmk SSO_0912 cytidylate kinasechromosome CDS976909 684 + 0.533626
cpdB SSO_4398 2':3'-cyclic-nucleotide 2'-phosphodiesterasechromosome CDS4661629 1944 - 0.494342
cyaA SSO_3978 adenylate cyclasechromosome CDS4200291 2547 + 0.521005
dcd SSO_2118 2'-deoxycytidine 5'-triphosphate deaminasechromosome CDS2214078 582 - 0.601375
deoA SSO_4533 thymidine phosphorylasechromosome CDS4802916 1323 + 0.547997
deoC SSO_4532 2-deoxyribose-5-phosphate aldolasechromosome CDS4802010 780 + 0.547436
deoD SSO_4535 purine-nucleoside phosphorylasechromosome CDS4805593 720 + 0.527778
dut SSO_3766 deoxyuridinetriphosphatasechromosome CDS3952718 456 - 0.548246
gmk SSO_3757 guanylate kinasechromosome CDS3945050 624 - 0.488782
gppA SSO_3950 guanosine pentaphosphatase; exopolyphosphatasechromosome CDS4173437 1485 - 0.538047
gpt SSO_0280 guanine-hypoxanthine phosphoribosyltransferasechromosome CDS308731 459 + 0.51634
guaA SSO_2589 GMP synthetasechromosome CDS2734501 1578 - 0.542459
guaC SSO_0112 GMP reductasechromosome CDS122671 1044 + 0.51341
hpt SSO_0133 hypoxanthine phosphoribosyltransferasechromosome CDS150395 549 + 0.504554
ndk SSO_2600 nucleoside diphosphate kinasechromosome CDS2747975 432 - 0.530093
nrdA SSO_2293 ribonucleoside diphosphate reductase 1, alpha subunit, B1chromosome CDS2418378 2286 + 0.538058
nrdB SSO_2294 ribonucleoside-diphosphate reductase 1, beta subunit, B2chromosome CDS2420897 1131 + 0.507515
nrdD SSO_4419 anaerobic ribonucleoside-triphosphate reductasechromosome CDS4686975 2139 - 0.538569
nrdE SSO_2820 ribonucleoside-diphosphate reductase 2 alpha subunitchromosome CDS2962464 2145 + 0.523543
nrdF SSO_2821 ribonucleoside-diphosphate reductase 2, beta chain, fragchromosome CDS2964618 960 + 0.48125
nupC SSO_2485 permease of transport system for 3 nucleosideschromosome CDS2626978 1203 + 0.496259
pfs SSO_0171 conserved hypothetical proteinchromosome CDS192598 699 - 0.529328
ppx SSO_2584 exopolyphosphatasechromosome CDS2728656 1542 + 0.514916
prsA SSO_1971 phosphoribosylpyrophosphate synthetasechromosome CDS2072881 948 + 0.528481
purA SSO_4362 adenylosuccinate synthetasechromosome CDS4631536 1299 + 0.538106
purB SSO_1149 adenylosuccinate lyasechromosome CDS1230639 1371 - 0.527352
purC SSO_2557 phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetasechromosome CDS2698958 714 - 0.522409
purD SSO_4178 phosphoribosylglycinamide synthetasechromosome CDS4422833 1290 - 0.582171
purE SSO_0495 phosphoribosylaminoimidazole carboxylasechromosome CDS524185 510 + 0.580392
purF SSO_2370 amidophosphoribosyltransferasechromosome CDS2500489 1518 - 0.527009
purH SSO_4179 phosphoribosylaminoimidazolecarboxamideformyltransferasechromosome CDS4424134 1590 - 0.561635
purK SSO_0496 phosphoribosylaminoimidazole carboxylasechromosome CDS524691 1068 + 0.564607
purL SSO_2640 phosphoribosylformyl-glycineamide synthetase FGAM synthetasechromosome CDS2795630 3888 - 0.569959
purM SSO_2581 phosphoribosylaminoimidazole synthetasechromosome CDS2724739 1038 + 0.531792
purN SSO_2582 phosphoribosylglycinamide formyltransferase 1chromosome CDS2725776 639 + 0.532081
purT SSO_1299 phosphoribosylglycinamide formyltransferase 2chromosome CDS1376240 1179 - 0.537744
purU SSO_1947 formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesischromosome CDS2046905 843 + 0.47331
pyrB SSO_4426 aspartate carbamoyltransferase, catalytic subunitchromosome CDS4697913 936 - 0.537393
pyrC SSO_1082 dihydro-orotasechromosome CDS1162866 1047 - 0.531041
pyrD SSO_0949 dihydro-orotate dehydrogenasechromosome CDS1022861 1011 + 0.469832
pyrE SSO_3764 orotate phosphoribosyltransferasechromosome CDS3951337 642 + 0.52648
pyrF SSO_1859 orotidine-5'-phosphate decarboxylasechromosome CDS1956878 738 - 0.525745
pyrG SSO_2937 CTP synthetasechromosome CDS3077756 1638 - 0.517094
pyrH SSO_0183 uridylate kinasechromosome CDS206776 726 + 0.527548
pyrI SSO_4425 aspartate carbamoyltransferase, regulatory subunitchromosome CDS4697439 462 - 0.489177
tdk SSO_1941 thymidine kinasechromosome CDS2041385 618 - 0.423948
thyA SSO_2984 thymidylate synthetasechromosome CDS3133977 795 - 0.510692
tmk SSO_1118 thymidylate kinasechromosome CDS1196415 642 + 0.537383
udk SSO_2119 uridine/cytidine kinasechromosome CDS2214751 696 - 0.489943
udp SSO_4006 uridine phosphorylasechromosome CDS4233875 762 + 0.538058
upp SSO_2580 uracil phosphoribosyltransferasechromosome CDS2723788 654 - 0.533639
uraA SSO_2579 uracil transportchromosome CDS2722413 1290 - 0.520155
ushA SSO_P147 UshApSS_046 CDS131553 1653 + 0.405324
ushA SSO_0469 UDP-sugar hydrolasechromosome CDS498265 1653 + 0.507562
yaaF SSO_0035 conserved hypothetical proteinchromosome CDS34459 915 + 0.554098
yahJ SSO_0309 putative deaminasechromosome CDS338064 1383 - 0.562545
ybeK SSO_0605 putative tRNA synthetasechromosome CDS644768 936 - 0.510684
ycdG SSO_1024 putative transport proteinchromosome CDS1104435 1395 - 0.539785
ycfF SSO_1123 conserved hypothetical proteinchromosome CDS1203176 360 + 0.505556
yeiJ SSO_2217 putative transport system permease proteinchromosome CDS2325661 1251 - 0.4996
yeiK SSO_2218 conserved hypothetical proteinchromosome CDS2327011 942 - 0.5138
yeiM SSO_2220 putative transport system permease proteinchromosome CDS2328847 1251 - 0.503597
yfhC SSO_2642 putative deaminasechromosome CDS2801328 537 - 0.543762
ygfU SSO_3041 putative permeasechromosome CDS3201105 1518 + 0.48419
yggV SSO_3108 putative ribosomal proteinchromosome CDS3268398 594 + 0.558923
yghR SSO_3220 conserved hypothetical proteinchromosome CDS3386188 759 + 0.534914
yghS SSO_3219 conserved hypothetical proteinchromosome CDS3385443 714 + 0.501401
yghT SSO_3130 conserved hypothetical proteinchromosome CDS3290584 675 + 0.497778
yicE SSO_3751 putative transport proteinchromosome CDS3936765 1392 - 0.551724
yicP SSO_3619 probable adenine deaminasechromosome CDS3786982 1767 + 0.546689