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2024-05-05 21:30:20

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Shewanella oneidensis MR-1, MR-1

Number of genes found: 79

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
SO0093 NupC family proteinchromosome CDS100974 1221 - 0.394758
SO0302 hypothetical proteinchromosome CDS307975 507 - 0.424063
SO0811 inosine-uridine preferring nucleoside hydrolase family proteinchromosome CDS822729 957 - 0.501567
SO1214 NupC family proteinchromosome CDS1260899 1299 + 0.455735
SO1258 adenylosuccinate synthetase, putativechromosome CDS1306434 1257 - 0.490056
SO1397 cytosine deaminasechromosome CDS1453830 438 - 0.506849
SO1513 hypothetical proteinchromosome CDS1588140 465 + 0.430108
SO1979 MutT/nudix family proteinchromosome CDS2083546 714 + 0.446779
SO1980 phosphoribosyl transferase domain proteinchromosome CDS2084616 906 + 0.466887
SO2485 deoxyguanosinetriphosphate triphosphohydrolase, putativechromosome CDS2606493 1326 + 0.484163
SO2666 hypothetical proteinchromosome CDS2796231 567 + 0.382716
SO2723 HIT family proteinchromosome CDS2839869 357 - 0.501401
SO3140 thymidine kinasechromosome CDS3273023 579 - 0.419689
SO3291 cytidine/deoxycytidylate deaminase family proteinchromosome CDS3434995 585 - 0.494017
SO3317 5'-nucleotidase, putativechromosome CDS3469345 1752 + 0.496575
SO3358 HAM1 proteinchromosome CDS3500355 618 + 0.491909
SO3705 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase, putativechromosome CDS3854420 786 + 0.494911
SO3706 NupC family proteinchromosome CDS3855323 1269 + 0.494878
SO3778 adenylate cyclase CyaB, putativechromosome CDS3928713 585 - 0.476923
SO3994 hypothetical proteinchromosome CDS4132274 1020 - 0.319608
SO4066 phosphoribosylaminoimidazole-succinocarboxamide synthase, putativechromosome CDS4219693 1104 + 0.493659
SO4296 NupC family proteinchromosome CDS4474439 1206 + 0.494196
SO4297 uridine phosphorylase, putativechromosome CDS4475715 726 + 0.53719
SO4312 adenylate cyclase CyaA, putativechromosome CDS4488008 2415 - 0.457971
SOA0158 hypothetical proteinmegaplasmid CDS146804 321 - 0.470405
add adenosine deaminasechromosome CDS4935576 996 - 0.486948
adk adenylate kinasechromosome CDS2117461 645 + 0.494574
apt adenine phosphoribosyltransferasechromosome CDS2109294 546 + 0.446886
carA carbamoyl-phosphate synthase, small subunitchromosome CDS1181758 1161 + 0.478898
carB carbamoyl-phosphate synthase, large subunitchromosome CDS1182946 3225 + 0.502326
cdd cytidine deaminasechromosome CDS2913784 891 + 0.488215
cmk cytidylate kinasechromosome CDS2506860 693 - 0.479076
cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterasechromosome CDS3727570 2058 + 0.438776
dcd deoxycytidine triphosphate deaminasechromosome CDS2752176 582 - 0.510309
deoA thymidine phosphorylasechromosome CDS1264751 1332 + 0.487237
deoC deoxyribose-phosphate aldolasechromosome CDS1263796 771 + 0.476005
deoD-1 purine nucleoside phosphorylasechromosome CDS100249 711 - 0.390999
deoD-2 purine nucleoside phosphorylasechromosome CDS1267398 711 + 0.448664
deoD-3 purine nucleoside phosphorylasechromosome CDS2837111 705 - 0.456738
dut deoxyuridine 5'-triphosphate nucleotidohydrolasechromosome CDS4427303 459 + 0.511983
fhs formate--tetrahydrofolate ligasechromosome CDS580495 1713 + 0.493287
gmk guanylate kinasechromosome CDS370741 624 - 0.496795
gppA guanosine-5'-triphosphate,3'-diphosphatepyrophos phatasechromosome CDS425050 921 + 0.462541
guaA GMP synthasechromosome CDS3435675 1578 - 0.491762
hpt-2 hypoxanthine phosphoribosyltransferasechromosome CDS3958012 531 - 0.440678
miaE tRNA-(MS[2]IO[6]A)-hydroxylasechromosome CDS1875042 786 + 0.447837
ndk nucleoside diphosphate kinasechromosome CDS2386976 432 + 0.462963
nrdA ribonucleoside-diphosphate reductase, alpha subunitchromosome CDS2520877 2289 + 0.463521
nrdB ribonucleoside-diphosphate reductase, beta subunitchromosome CDS2523226 1131 + 0.461538
nrdD anaerobic ribonucleoside-triphosphate reductasechromosome CDS2950929 2118 - 0.478281
pfs 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidasechromosome CDS1375956 711 - 0.489451
ppx exopolyphosphatasechromosome CDS2294916 1557 - 0.470777
prsA ribose-phosphate pyrophosphokinasechromosome CDS3986624 948 + 0.489451
purA adenylosuccinate synthetasechromosome CDS4082753 1296 - 0.482253
purB adenylosuccinate lyasechromosome CDS2770486 1371 + 0.474106
purD phosphoribosylamine--glycine ligasechromosome CDS468430 1299 - 0.525789
purE phosphoribosylaminoimidazole carboxylase, catalytic subunitchromosome CDS3712440 492 + 0.497967
purF amidophosphoribosyltransferasechromosome CDS3180212 1515 - 0.478548
purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolasechromosome CDS469791 1632 - 0.505515
purK phosphoribosylaminoimidazole carboxylase, ATPase subunitchromosome CDS3712931 1098 + 0.486339
purL phosphoribosylformylglycinamidine synthasechromosome CDS3428937 3882 - 0.503606
purM phosphoribosylformylglycinamidine cyclo-ligasechromosome CDS2882759 1059 + 0.474976
purN phosphoribosylglycinamide formyltransferasechromosome CDS2883817 645 + 0.491473
purT phosphoribosylglycinamide formyltransferase 2chromosome CDS3774248 1137 + 0.51803
purU formyltetrahydrofolate deformylasechromosome CDS1705770 816 + 0.444853
pyrB aspartate carbamoyltransferasechromosome CDS1353321 1020 - 0.466667
pyrC dihydroorotase, homodimeric typechromosome CDS3846010 1032 + 0.50969
pyrD dihydroorotate dehydrogenasechromosome CDS2719790 1020 - 0.401961
pyrE orotate phosphoribosyltransferasechromosome CDS4431516 648 - 0.492284
pyrF orotidine 5`-phosphate decarboxylasechromosome CDS2502432 696 - 0.474138
pyrG CTP synthasechromosome CDS3584994 1641 - 0.46496
pyrH uridylate kinasechromosome CDS1713184 729 + 0.474623
thyA thymidylate synthasechromosome CDS1393066 795 + 0.466667
tmk thymidylate kinasechromosome CDS2749728 630 - 0.498413
udk uridine kinasechromosome CDS2752787 639 - 0.450704
udp uridine phosphorylasechromosome CDS4289808 759 - 0.500659
upp uracil phosphoribosyltransferasechromosome CDS2881826 627 - 0.460925
uraA uracil permeasechromosome CDS2999541 1239 + 0.474576
ushA 5'-nucleotidasechromosome CDS2099989 1710 + 0.444444