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2024-05-05 15:42:07

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Shigella boydii Sb227, Sb227

Number of genes found: 75

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_2118 hypothetical proteinchromosome CDS2097956 261 + 0.505747
NA SBO_4353 conserved hypothetical proteinchromosome CDS4405394 225 + 0.542222
NA SBO_3111 conserved hypothetical proteinchromosome CDS3112720 1398 - 0.528612
add SBO_1511 adenosine deaminasechromosome CDS1487550 1002 - 0.535928
adk SBO_0374 adenylate kinase activitychromosome CDS390425 645 + 0.517829
apt SBO_0369 adenine phosphoribosyltransferasechromosome CDS384722 552 + 0.541667
carA SBO_0031 carbamoyl-phosphate synthetase, glutamine (small) subunitchromosome CDS29686 1149 + 0.532637
carB SBO_0032 carbamoyl-phosphate synthase large subunitchromosome CDS30852 3222 + 0.562384
cdd SBO_0998 cytidine/deoxycytidine deaminasechromosome CDS1017953 885 - 0.546893
cmk SBO_2198 cytidylate kinasechromosome CDS2177149 684 + 0.530702
cpdB SBO_4230 2':3'-cyclic-nucleotide 2'-phosphodiesterasechromosome CDS4286614 1944 + 0.493313
cyaA SBO_3817 adenylate cyclasechromosome CDS3839112 2547 + 0.52022
dcd SBO_0892 2'-deoxycytidine 5'-triphosphate deaminasechromosome CDS912510 582 - 0.599656
deoA SBO_4444 thymidine phosphorylasechromosome CDS4496698 1323 + 0.5548
deoC SBO_4443 2-deoxyribose-5-phosphate aldolasechromosome CDS4495792 780 + 0.544872
deoD SBO_4446 purine-nucleoside phosphorylasechromosome CDS4499375 720 + 0.527778
dgt SBO_0149 deoxyguanosine triphosphate triphosphohydrolasechromosome CDS165266 1518 + 0.478261
dut SBO_3642 deoxyuridinetriphosphatasechromosome CDS3659530 456 + 0.550439
gmk SBO_3729 guanylate kinasechromosome CDS3746261 624 - 0.488782
gppA SBO_3789 guanosine pentaphosphatasechromosome CDS3812233 1485 - 0.538047
gpt SBO_0244 guanine-hypoxanthine phosphoribosyltransferasechromosome CDS260218 459 + 0.511983
guaA SBO_2531 GMP synthetasechromosome CDS2526681 1578 - 0.543093
guaC SBO_0092 GMP reductasechromosome CDS101338 1044 + 0.511494
hpt SBO_0114 hypoxanthine phosphoribosyltransferasechromosome CDS129618 549 + 0.502732
ndk SBO_2542 nucleoside diphosphate kinasechromosome CDS2540155 432 - 0.525463
nrdA SBO_2060 ribonucleoside diphosphate reductase 1, alpha subunit, B1chromosome CDS2032386 2286 - 0.537183
nrdB SBO_2059 ribonucleoside-diphosphate reductase 1, beta subunit, B2chromosome CDS2031109 1131 - 0.504863
nrdD SBO_4208 anaerobic ribonucleoside-triphosphate reductasechromosome CDS4259739 2139 + 0.537167
nrdE SBO_2842 ribonucleoside-diphosphate reductase 2, alpha subunitchromosome CDS2850039 2145 - 0.523543
nrdF SBO_2841 ribonucleoside-diphosphate reductase 2, beta chain, fragchromosome CDS2849115 915 - 0.479781
nrdI SBO_2843 conserved hypothetical proteinchromosome CDS2852156 411 - 0.557178
nupC SBO_2418 permease of transport system for 3 nucleosideschromosome CDS2414972 1203 + 0.497091
pfs SBO_0148 conserved hypothetical proteinchromosome CDS164484 699 - 0.525036
ppx SBO_2523 exopolyphosphatasechromosome CDS2518767 1542 + 0.514267
prsA SBO_1860 phosphoribosylpyrophosphate synthetasechromosome CDS1840784 948 + 0.526371
purA SBO_4279 adenylosuccinate synthetasechromosome CDS4328294 1299 - 0.539646
purB SBO_1908 adenylosuccinate lyasechromosome CDS1887674 1371 + 0.528082
purC SBO_2493 phosphoribosylaminoimidazole-succinocarboxamidesynthetasechromosome CDS2486949 714 - 0.52381
purD SBO_4026 phosphoribosylglycinamide synthetasechromosome CDS4063044 1290 - 0.582171
purE SBO_0420 phosphoribosylaminoimidazole carboxylasechromosome CDS435414 510 + 0.590196
purF SBO_2349 amidophosphoribosyltransferasechromosome CDS2337616 1518 - 0.528986
purH SBO_4027 phosphoribosylaminoimidazolecarboxamideformyltransferasechromosome CDS4064345 1590 - 0.561006
purK SBO_0421 phosphoribosylaminoimidazole carboxylasechromosome CDS435920 1068 + 0.565543
purL SBO_2585 phosphoribosylformyl-glycineamide synthetasechromosome CDS2588733 3888 - 0.566101
purM SBO_2520 phosphoribosylaminoimidazole synthetasechromosome CDS2514849 1038 + 0.530829
purN SBO_2521 phosphoribosylglycinamide formyltransferase 1chromosome CDS2515886 639 + 0.533646
purT SBO_1157 phosphoribosylglycinamide formyltransferase 2chromosome CDS1155972 1179 + 0.536896
purU SBO_1837 formyltetrahydrofolate deformylasechromosome CDS1815219 843 + 0.47331
pyrB SBO_4201 aspartate carbamoyltransferase catalytic subunitchromosome CDS4250004 936 + 0.532051
pyrC SBO_2002 dihydro-orotasechromosome CDS1974079 1047 + 0.527221
pyrD SBO_2286 dihydro-orotate dehydrogenasechromosome CDS2274543 1011 - 0.469832
pyrE SBO_3644 orotate phosphoribosyltransferasechromosome CDS3660725 642 - 0.531153
pyrF SBO_1783 orotidine-5'-phosphate decarboxylasechromosome CDS1760423 738 - 0.52439
pyrG SBO_2661 CTP synthetasechromosome CDS2664742 1638 - 0.518926
pyrH SBO_0159 uridylate kinasechromosome CDS177873 726 + 0.526171
pyrI SBO_4202 aspartate carbamoyltransferase regulatory subunitchromosome CDS4250952 462 + 0.487013
tdk SBO_1831 thymidine kinasechromosome CDS1809699 618 - 0.42233
thyA SBO_2719 thymidylate synthetasechromosome CDS2729610 795 - 0.514465
tmk SBO_1965 thymidylate kinasechromosome CDS1939568 642 - 0.534268
udk SBO_0893 uridine/cytidine kinasechromosome CDS913183 696 - 0.488506
udp SBO_3845 uridine phosphorylasechromosome CDS3869867 762 + 0.541995
upp SBO_2519 uracil phosphoribosyltransferasechromosome CDS2513899 654 - 0.530581
uraA SBO_2518 uracil transportchromosome CDS2512524 1290 - 0.522481
ushA SBO_0382 UDP-sugar hydrolasechromosome CDS398837 1653 + 0.508167
yaaF SBO_0029 conserved hypothetical proteinchromosome CDS27329 915 + 0.560656
ybbT SBO_0409 conserved hypothetical proteinchromosome CDS426517 483 + 0.511387
ybeK SBO_0514 putative tRNA synthetasechromosome CDS532768 936 - 0.508547
ycfF SBO_1958 conserved hypothetical proteinchromosome CDS1932312 360 - 0.502778
yeiJ SBO_2166 putative transport system permease proteinchromosome CDS2141364 1251 + 0.504396
yeiK SBO_2165 conserved hypothetical proteinchromosome CDS2140536 729 + 0.547325
yfhC SBO_2587 putative deaminasechromosome CDS2594433 537 - 0.540037
ygfU SBO_3104 putative permeasechromosome CDS3105657 1518 - 0.487484
yggV SBO_3036 putative ribosomal proteinchromosome CDS3036267 594 - 0.553872
yicE SBO_3723 putative transport proteinchromosome CDS3738111 1392 - 0.548851
yicP SBO_3704 probable adenine deaminasechromosome CDS3720328 1767 - 0.547821